RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 CLEC4DQ8WXI8 215 aa19.33■□□□□ 0.68
RPAIN-208ENST00000571043 TRERF1Q96PN7 1200 aa19.33■□□□□ 0.68
RPAIN-208ENST00000571043 MOV10L1Q9BXT6 1211 aaKnown RBP19.33■□□□□ 0.68
RPAIN-208ENST00000571043 ADD3Q9UEY8 706 aaKnown RBP19.33■□□□□ 0.68
RPAIN-208ENST00000571043 DOCK3Q8IZD9 2030 aa19.32■□□□□ 0.68
RPAIN-208ENST00000571043 SLC25A27O95847 323 aa19.32■□□□□ 0.68
RPAIN-208ENST00000571043 BCRP11274 1271 aa19.32■□□□□ 0.68
RPAIN-208ENST00000571043 KCNJ6P48051 423 aa19.32■□□□□ 0.68
RPAIN-208ENST00000571043 GHRHRQ02643 423 aa19.32■□□□□ 0.68
RPAIN-208ENST00000571043 SPIRE1Q08AE8 756 aa19.32■□□□□ 0.68
RPAIN-208ENST00000571043 CRHR2Q13324 411 aa19.32■□□□□ 0.68
RPAIN-208ENST00000571043 KCTD17Q8N5Z5 321 aa19.32■□□□□ 0.68
RPAIN-208ENST00000571043 SAMD3Q8N6K7 520 aa19.32■□□□□ 0.68
RPAIN-208ENST00000571043 CCDC112Q8NEF3 446 aa19.32■□□□□ 0.68
RPAIN-208ENST00000571043 GJA10Q969M2 543 aa19.32■□□□□ 0.68
RPAIN-208ENST00000571043 KCND1Q9NSA2 647 aa19.32■□□□□ 0.68
RPAIN-208ENST00000571043 THSD7BQ9C0I4 1608 aa19.32■□□□□ 0.68
RPAIN-208ENST00000571043 BICDL2A1A5D9 508 aa19.31■□□□□ 0.68
RPAIN-208ENST00000571043 MSH4O15457 936 aa19.31■□□□□ 0.68
RPAIN-208ENST00000571043 HSD17B4P51659 736 aa19.31■□□□□ 0.68
RPAIN-208ENST00000571043 PSMD2Q13200 908 aa19.31■□□□□ 0.68
RPAIN-208ENST00000571043 KCNK18Q7Z418 384 aa19.31■□□□□ 0.68
RPAIN-208ENST00000571043 MCF2L2Q86YR7 1114 aa19.31■□□□□ 0.68
RPAIN-208ENST00000571043 CHST13Q8NET6 341 aa19.31■□□□□ 0.68
RPAIN-208ENST00000571043 TBC1D5Q92609 795 aa19.31■□□□□ 0.68
RPAIN-208ENST00000571043 CFHR5Q9BXR6 569 aa19.31■□□□□ 0.68
RPAIN-208ENST00000571043 MAF1Q9H063 256 aa19.31■□□□□ 0.68
RPAIN-208ENST00000571043 THAP9Q9H5L6 903 aa19.31■□□□□ 0.68
RPAIN-208ENST00000571043 BMP2KQ9NSY1 1161 aaPredicted RBP19.31■□□□□ 0.68
RPAIN-208ENST00000571043 CPA4Q9UI42 421 aa19.31■□□□□ 0.68
RPAIN-208ENST00000571043 MAPK8IP1Q9UQF2 711 aa19.31■□□□□ 0.68
RPAIN-208ENST00000571043 IGLV3-22A0A075B6J6 115 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 CCNE1P24864 410 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 COPB2P35606 906 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 TERF1P54274 439 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 CCNA1P78396 465 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 STK4Q13043 487 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 MUM1L1Q5H9M0 696 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 SHCBP1Q8NEM2 672 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 HOMER2Q9NSB8 354 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 RNF146Q9NTX7 359 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 MAP3K20Q9NYL2 800 aaKnown RBP19.3■□□□□ 0.68
RPAIN-208ENST00000571043 KRT31Q15323 416 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 TCP11X2Q5H9J9 407 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 TTI2Q6NXR4 508 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 DNAJC5GQ8N7S2 189 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 DDX12PQ92771 950 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 P2RX5Q93086 422 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 MROH8Q9H579 483 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 ACAD9Q9H845 621 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 RNF186Q9NXI6 227 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 FBXO40Q9UH90 709 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 VAV3Q9UKW4 847 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 KIAA1024Q9UPX6 916 aa19.3■□□□□ 0.68
RPAIN-208ENST00000571043 KCNJ18B7U540 433 aa19.29■□□□□ 0.68
RPAIN-208ENST00000571043 NFIBO00712 420 aa19.29■□□□□ 0.68
RPAIN-208ENST00000571043 ERCC3P19447 782 aa19.29■□□□□ 0.68
RPAIN-208ENST00000571043 EEF1GP26641 437 aaKnown RBP19.29■□□□□ 0.68
RPAIN-208ENST00000571043 RPA1P27694 616 aa19.29■□□□□ 0.68
RPAIN-208ENST00000571043 PBX1P40424 430 aa19.29■□□□□ 0.68
RPAIN-208ENST00000571043 EHHADHQ08426 723 aa19.29■□□□□ 0.68
RPAIN-208ENST00000571043 KCNJ12Q14500 433 aa19.29■□□□□ 0.68
RPAIN-208ENST00000571043 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.29■□□□□ 0.68
RPAIN-208ENST00000571043 NCAPG2Q86XI2 1143 aa19.29■□□□□ 0.68
RPAIN-208ENST00000571043 TMX1Q9H3N1 280 aa19.29■□□□□ 0.68
RPAIN-208ENST00000571043 R3HDMLQ9H3Y0 253 aa19.29■□□□□ 0.68
RPAIN-208ENST00000571043 POTEB3A0JP26 581 aa19.28■□□□□ 0.68
RPAIN-208ENST00000571043 MED24O75448 989 aa19.28■□□□□ 0.68
RPAIN-208ENST00000571043 TRPA1O75762 1119 aa19.28■□□□□ 0.68
RPAIN-208ENST00000571043 PLA2G4BP0C869 781 aa19.28■□□□□ 0.68
RPAIN-208ENST00000571043 FCER1AP12319 257 aa19.28■□□□□ 0.68
RPAIN-208ENST00000571043 SETQ01105 290 aaPredicted RBP19.28■□□□□ 0.68
RPAIN-208ENST00000571043 CEP55Q53EZ4 464 aa19.28■□□□□ 0.68
RPAIN-208ENST00000571043 DNTTIP2Q5QJE6 756 aaKnown RBP19.28■□□□□ 0.68
RPAIN-208ENST00000571043 NCAPH2Q6IBW4 605 aa19.28■□□□□ 0.68
RPAIN-208ENST00000571043 FOXR2Q6PJQ5 311 aa19.28■□□□□ 0.68
RPAIN-208ENST00000571043 POTEBQ6S5H4 581 aa19.28■□□□□ 0.68
RPAIN-208ENST00000571043 KIAA0895Q8NCT3 520 aa19.28■□□□□ 0.68
RPAIN-208ENST00000571043 CYP2W1Q8TAV3 490 aa19.28■□□□□ 0.68
RPAIN-208ENST00000571043 DNAJC19Q96DA6 116 aa19.28■□□□□ 0.68
RPAIN-208ENST00000571043 TRIM47Q96LD4 638 aa19.28■□□□□ 0.68
RPAIN-208ENST00000571043 POLR3CQ9BUI4 534 aaPredicted RBP19.28■□□□□ 0.68
RPAIN-208ENST00000571043 PORCNQ9H237 461 aa19.28■□□□□ 0.68
RPAIN-208ENST00000571043 ITIH6Q6UXX5 1313 aa19.28■□□□□ 0.68
RPAIN-208ENST00000571043 TRIM49BA6NDI0 452 aa19.27■□□□□ 0.68
RPAIN-208ENST00000571043 COBLO75128 1261 aa19.27■□□□□ 0.68
RPAIN-208ENST00000571043 COPB1P53618 953 aaKnown RBP19.27■□□□□ 0.68
RPAIN-208ENST00000571043 PMS1P54277 932 aaKnown RBP19.27■□□□□ 0.68
RPAIN-208ENST00000571043 DYMQ7RTS9 669 aa19.27■□□□□ 0.68
RPAIN-208ENST00000571043 CATSPER3Q86XQ3 398 aa19.27■□□□□ 0.68
RPAIN-208ENST00000571043 IRF2BP1Q8IU81 584 aa19.27■□□□□ 0.68
RPAIN-208ENST00000571043 GUF1Q8N442 669 aaKnown RBP19.27■□□□□ 0.68
RPAIN-208ENST00000571043 SLC5A5Q92911 643 aa19.27■□□□□ 0.68
RPAIN-208ENST00000571043 RPTORQ8N122 1335 aa19.27■□□□□ 0.68
RPAIN-208ENST00000571043 MYH7BA7E2Y1 1941 aa19.27■□□□□ 0.67
RPAIN-208ENST00000571043 E9PMD0 336 aa19.26■□□□□ 0.67
RPAIN-208ENST00000571043 MEIS1O00470 390 aa19.26■□□□□ 0.67
RPAIN-208ENST00000571043 TEX33O43247 280 aa19.26■□□□□ 0.67
RPAIN-208ENST00000571043 TBC1D8O95759 1140 aa19.26■□□□□ 0.67
RPAIN-208ENST00000571043 SPATA31C1P0DKV0 1188 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms