RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 H3BQ06 376 aaPredicted RBP15.24■□□□□ 0.03
CCDC40-205ENST00000571028 JAK2O60674 1132 aa15.24■□□□□ 0.03
CCDC40-205ENST00000571028 CTDNEP1O95476 244 aa15.24■□□□□ 0.03
CCDC40-205ENST00000571028 TXNP10599 105 aaKnown RBP15.24■□□□□ 0.03
CCDC40-205ENST00000571028 MRPL12P52815 198 aaKnown RBP15.24■□□□□ 0.03
CCDC40-205ENST00000571028 RPS6P62753 249 aaKnown RBP15.24■□□□□ 0.03
CCDC40-205ENST00000571028 ST3GAL1Q11201 340 aa15.24■□□□□ 0.03
CCDC40-205ENST00000571028 IKBKEQ14164 716 aa15.24■□□□□ 0.03
CCDC40-205ENST00000571028 PKN1Q16512 942 aa15.24■□□□□ 0.03
CCDC40-205ENST00000571028 PFKFB3Q16875 520 aaPredicted RBP15.24■□□□□ 0.03
CCDC40-205ENST00000571028 TIGD5Q53EQ6 642 aa15.24■□□□□ 0.03
CCDC40-205ENST00000571028 FCHSD1Q86WN1 690 aa15.24■□□□□ 0.03
CCDC40-205ENST00000571028 SMARCC2Q8TAQ2 1214 aa15.24■□□□□ 0.03
CCDC40-205ENST00000571028 MFSD14AQ96MC6 490 aa15.24■□□□□ 0.03
CCDC40-205ENST00000571028 SH2B1Q9NRF2 756 aaPredicted RBP15.24■□□□□ 0.03
CCDC40-205ENST00000571028 TANC1Q9C0D5 1861 aa15.24■□□□□ 0.03
CCDC40-205ENST00000571028 SCN5AQ14524 2016 aa15.24■□□□□ 0.03
CCDC40-205ENST00000571028 GCOM1H8Y6P7 765 aaPredicted RBP15.23■□□□□ 0.03
CCDC40-205ENST00000571028 OPLAHO14841 1288 aa15.23■□□□□ 0.03
CCDC40-205ENST00000571028 POLR2MP0CAP2 368 aa15.23■□□□□ 0.03
CCDC40-205ENST00000571028 MCM2P49736 904 aa15.23■□□□□ 0.03
CCDC40-205ENST00000571028 CUL5Q93034 780 aa15.23■□□□□ 0.03
CCDC40-205ENST00000571028 MRPL38Q96DV4 380 aaKnown RBP15.23■□□□□ 0.03
CCDC40-205ENST00000571028 TMX3Q96JJ7 454 aa15.23■□□□□ 0.03
CCDC40-205ENST00000571028 AIFM3Q96NN9 605 aa15.23■□□□□ 0.03
CCDC40-205ENST00000571028 TAAR1Q96RJ0 339 aa15.23■□□□□ 0.03
CCDC40-205ENST00000571028 PSTPIP2Q9H939 334 aa15.23■□□□□ 0.03
CCDC40-205ENST00000571028 VPS54Q9P1Q0 977 aa15.23■□□□□ 0.03
CCDC40-205ENST00000571028 ORC3Q9UBD5 711 aaPredicted RBP15.23■□□□□ 0.03
CCDC40-205ENST00000571028 INSL6Q9Y581 213 aa15.23■□□□□ 0.03
CCDC40-205ENST00000571028 SMCO2A6NFE2 343 aa15.22■□□□□ 0.03
CCDC40-205ENST00000571028 STXBP3O00186 592 aa15.22■□□□□ 0.03
CCDC40-205ENST00000571028 DEXIO95424 95 aa15.22■□□□□ 0.03
CCDC40-205ENST00000571028 ADCY7P51828 1080 aa15.22■□□□□ 0.03
CCDC40-205ENST00000571028 UBE2SQ16763 222 aa15.22■□□□□ 0.03
CCDC40-205ENST00000571028 TYW1BQ6NUM6 668 aa15.22■□□□□ 0.03
CCDC40-205ENST00000571028 USP17L6PQ6QN14 398 aa15.22■□□□□ 0.03
CCDC40-205ENST00000571028 C7orf31Q8N865 590 aa15.22■□□□□ 0.03
CCDC40-205ENST00000571028 NSUN7Q8NE18 718 aaKnown RBP15.22■□□□□ 0.03
CCDC40-205ENST00000571028 SYTL5Q8TDW5 730 aaPredicted RBP15.22■□□□□ 0.03
CCDC40-205ENST00000571028 COPS5Q92905 334 aa15.22■□□□□ 0.03
CCDC40-205ENST00000571028 C17orf80Q9BSJ5 609 aa15.22■□□□□ 0.03
CCDC40-205ENST00000571028 BARHL2Q9NY43 387 aa15.22■□□□□ 0.03
CCDC40-205ENST00000571028 PRKAG3Q9UGI9 489 aa15.22■□□□□ 0.03
CCDC40-205ENST00000571028 CXCL10P02778 98 aa15.21■□□□□ 0.03
CCDC40-205ENST00000571028 AMHP03971 560 aa15.21■□□□□ 0.03
CCDC40-205ENST00000571028 CKBP12277 381 aa15.21■□□□□ 0.03
CCDC40-205ENST00000571028 NLRP5P59047 1200 aa15.21■□□□□ 0.03
CCDC40-205ENST00000571028 GDF6Q6KF10 455 aaPredicted RBP15.21■□□□□ 0.03
CCDC40-205ENST00000571028 RGS22Q8NE09 1264 aa15.21■□□□□ 0.03
CCDC40-205ENST00000571028 NEK9Q8TD19 979 aa15.21■□□□□ 0.03
CCDC40-205ENST00000571028 COL20A1Q9P218 1284 aa15.21■□□□□ 0.03
CCDC40-205ENST00000571028 MYH6P13533 1939 aa15.2■□□□□ 0.02
CCDC40-205ENST00000571028 POTEB3A0JP26 581 aa15.2■□□□□ 0.02
CCDC40-205ENST00000571028 NBNO60934 754 aa15.2■□□□□ 0.02
CCDC40-205ENST00000571028 EIF2AK2P19525 551 aaKnown RBP15.2■□□□□ 0.02
CCDC40-205ENST00000571028 ZP2Q05996 745 aa15.2■□□□□ 0.02
CCDC40-205ENST00000571028 ARHGEF16Q5VV41 709 aa15.2■□□□□ 0.02
CCDC40-205ENST00000571028 POTEBQ6S5H4 581 aa15.2■□□□□ 0.02
CCDC40-205ENST00000571028 HFE2Q6ZVN8 426 aa15.2■□□□□ 0.02
CCDC40-205ENST00000571028 SESTD1Q86VW0 696 aa15.2■□□□□ 0.02
CCDC40-205ENST00000571028 MYOCDQ8IZQ8 938 aa15.2■□□□□ 0.02
CCDC40-205ENST00000571028 BANK1Q8NDB2 785 aa15.2■□□□□ 0.02
CCDC40-205ENST00000571028 DNERQ8NFT8 737 aa15.2■□□□□ 0.02
CCDC40-205ENST00000571028 AFG1LQ8WV93 481 aa15.2■□□□□ 0.02
CCDC40-205ENST00000571028 PABPC5Q96DU9 382 aaKnown RBP15.2■□□□□ 0.02
CCDC40-205ENST00000571028 ZFP91Q96JP5 570 aaPredicted RBP15.2■□□□□ 0.02
CCDC40-205ENST00000571028 PGBD1Q96JS3 809 aa15.2■□□□□ 0.02
CCDC40-205ENST00000571028 SAMD11Q96NU1 681 aa15.2■□□□□ 0.02
CCDC40-205ENST00000571028 POP1Q99575 1024 aaKnown RBP15.2■□□□□ 0.02
CCDC40-205ENST00000571028 ALG1Q9BT22 464 aa15.2■□□□□ 0.02
CCDC40-205ENST00000571028 GJB4Q9NTQ9 266 aa15.2■□□□□ 0.02
CCDC40-205ENST00000571028 FOXD4L1Q9NU39 408 aa15.2■□□□□ 0.02
CCDC40-205ENST00000571028 hCG_1984214I3L0E3 225 aa15.19■□□□□ 0.02
CCDC40-205ENST00000571028 MMP3P08254 477 aa15.19■□□□□ 0.02
CCDC40-205ENST00000571028 FDPSP14324 419 aaKnown RBP15.19■□□□□ 0.02
CCDC40-205ENST00000571028 HSD17B4P51659 736 aa15.19■□□□□ 0.02
CCDC40-205ENST00000571028 JAKMIP3Q5VZ66 844 aa15.19■□□□□ 0.02
CCDC40-205ENST00000571028 PPP1R18Q6NYC8 613 aa15.19■□□□□ 0.02
CCDC40-205ENST00000571028 HSCBQ8IWL3 235 aa15.19■□□□□ 0.02
CCDC40-205ENST00000571028 ADHFE1Q8IWW8 467 aa15.19■□□□□ 0.02
CCDC40-205ENST00000571028 ZNF713Q8N859 430 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-205ENST00000571028 FAM184AQ8NB25 1140 aa15.19■□□□□ 0.02
CCDC40-205ENST00000571028 CCDC12Q8WUD4 166 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-205ENST00000571028 WASF1Q92558 559 aa15.19■□□□□ 0.02
CCDC40-205ENST00000571028 RMDN3Q96TC7 470 aa15.19■□□□□ 0.02
CCDC40-205ENST00000571028 KATNAL1Q9BW62 490 aa15.19■□□□□ 0.02
CCDC40-205ENST00000571028 C6orf50Q9HD87 102 aa15.19■□□□□ 0.02
CCDC40-205ENST00000571028 TMEM260Q9NX78 707 aa15.19■□□□□ 0.02
CCDC40-205ENST00000571028 CLDND1Q9NY35 253 aa15.19■□□□□ 0.02
CCDC40-205ENST00000571028 KCNJ14Q9UNX9 436 aa15.19■□□□□ 0.02
CCDC40-205ENST00000571028 STK36Q9NRP7 1315 aa15.18■□□□□ 0.02
CCDC40-205ENST00000571028 MEIS2O14770 477 aa15.18■□□□□ 0.02
CCDC40-205ENST00000571028 ADAMTS3O15072 1205 aa15.18■□□□□ 0.02
CCDC40-205ENST00000571028 GH1P01241 217 aa15.18■□□□□ 0.02
CCDC40-205ENST00000571028 MYCLP12524 364 aaPredicted RBP15.18■□□□□ 0.02
CCDC40-205ENST00000571028 RBL2Q08999 1139 aa15.18■□□□□ 0.02
CCDC40-205ENST00000571028 GPNMBQ14956 572 aa15.18■□□□□ 0.02
CCDC40-205ENST00000571028 EPC2Q52LR7 807 aa15.18■□□□□ 0.02
CCDC40-205ENST00000571028 CCDC148Q8NFR7 591 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms