RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 CDKL5O76039 1030 aa11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 TIMP1P01033 207 aa11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 SMIM10L2AP0DMW4 78 aa11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 SMIM10L2BP0DMW5 78 aa11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 RAG1P15918 1043 aa11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 ATP2B1P20020 1258 aa11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 NBR1Q14596 966 aa11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 PTGISQ16647 500 aa11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 UGCGQ16739 394 aa11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 TRIM71Q2Q1W2 868 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 LETM2Q2VYF4 491 aa11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 FAM109BQ6ICB4 259 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 KCNV1Q6PIU1 500 aa11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 RUFY4Q6ZNE9 571 aa11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 CCDC148Q8NFR7 591 aa11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 CCDC12Q8WUD4 166 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 ZSCAN31Q96LW9 406 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 UBE2OQ9C0C9 1292 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 TUT1Q9H6E5 874 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 SLC9A2Q9UBY0 812 aa11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 A0A087WWV3 80 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 TMEM150BA6NC51 233 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 GRXCR1A8MXD5 290 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 IPO5O00410 1097 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 EML1O00423 815 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 NOP56O00567 594 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 KPNA6O60684 536 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 MMP1P03956 469 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 MBTPS1Q14703 1052 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 MARCH8Q5T0T0 291 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 SWSAP1Q6NVH7 229 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 TRAF7Q6Q0C0 670 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 ABHD15Q6UXT9 468 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 CCDC60Q8IWA6 550 aaPredicted RBP11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 DIS3L2Q8IYB7 885 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 SEPT1Q8WYJ6 367 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 HAS1Q92839 578 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 MBOAT7Q96N66 472 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 ZNF577Q9BSK1 485 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 UNC45AQ9H3U1 944 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 HIPK3Q9H422 1215 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 JPH1Q9HDC5 661 aaPredicted RBP11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 GTF2IRD1Q9UHL9 959 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 SCN10AQ9Y5Y9 1956 aa11.15□□□□□ -0.62
GTF3C1-212ENST00000570129 LAMA3Q16787 3333 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 CYP3A7-CYP3A51PA0A087WV96 503 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 CHMP2AO43633 222 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 LGR5O75473 907 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 ATG7O95352 703 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 CYP3A7P24462 503 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 KRT2P35908 639 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 USP11P51784 963 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 IGBP1P78318 339 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 PLCB4Q15147 1175 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 NONOQ15233 471 aaKnown RBP eCLIP11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 BRDTQ58F21 947 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 NFRKBQ6P4R8 1299 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 NIPA1Q7RTP0 329 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 DEFB128Q7Z7B8 93 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 C7orf31Q8N865 590 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 ETNPPLQ8TBG4 499 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 BICD2Q8TD16 824 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 SLC5A5Q92911 643 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 LBHD1Q9BQE6 289 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.14□□□□□ -0.634e-13■■□□□ 12.6
GTF3C1-212ENST00000570129 SH2D3AQ9BRG2 576 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 GLT8D2Q9H1C3 349 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 TMEM60Q9H2L4 133 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 EHMT1Q9H9B1 1298 aa11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 CXXC1Q9P0U4 656 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-212ENST00000570129 SZT2Q5T011 3432 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 NFASCO94856 1347 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 CCDC194A0A1B0GVG4 234 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 ZBTB39O15060 712 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 ZNF862O60290 1169 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 EIF5BO60841 1220 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 PSMD10O75832 226 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 SUPT20HL2P0C7V6 817 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 INSRRP14616 1297 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 GJB2P29033 226 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 BMP8BP34820 402 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 FXR1P51114 621 aaKnown RBP eCLIP11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 ADAM17P78536 824 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 ZNF174Q15697 407 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 TMEM240Q5SV17 173 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 ZNF618Q5T7W0 954 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 MFSD5Q6N075 450 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 ZNF365Q70YC5 407 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 KRT25Q7Z3Z0 450 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 TMCO2Q7Z6W1 182 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 ZNF579Q8NAF0 562 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 LMBR1Q8WVP7 490 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 GLG1Q92896 1179 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 C8orf76Q96K31 380 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 SDF4Q9BRK5 362 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 UPF2Q9HAU5 1272 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 SH2B1Q9NRF2 756 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 PRKAG2Q9UGJ0 569 aa11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 DDX25Q9UHL0 483 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-212ENST00000570129 IGKV6D-21A0A0A0MT36 114 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms