RNA–Protein interactions for RNA: ENST00000569829.1

RPAP1-212, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-212ENST00000569829 BAZ2BQ9UIF8 2168 aaKnown RBP11.76□□□□□ -0.53
RPAP1-212ENST00000569829 EMSYQ7Z589 1322 aa11.76□□□□□ -0.53
RPAP1-212ENST00000569829 RALGAPA2Q2PPJ7 1873 aa11.76□□□□□ -0.53
RPAP1-212ENST00000569829 TMEM221A6NGB7 291 aa11.75□□□□□ -0.53
RPAP1-212ENST00000569829 B4E1Z4 1266 aa11.75□□□□□ -0.53
RPAP1-212ENST00000569829 H3BRB1 525 aa11.75□□□□□ -0.53
RPAP1-212ENST00000569829 M0R296 226 aa11.75□□□□□ -0.53
RPAP1-212ENST00000569829 CHRNA1P02708 482 aa11.75□□□□□ -0.53
RPAP1-212ENST00000569829 GHRP10912 638 aa11.75□□□□□ -0.53
RPAP1-212ENST00000569829 BMPR1AP36894 532 aa11.75□□□□□ -0.53
RPAP1-212ENST00000569829 PGM5Q15124 567 aa11.75□□□□□ -0.53
RPAP1-212ENST00000569829 RUFY4Q6ZNE9 571 aa11.75□□□□□ -0.53
RPAP1-212ENST00000569829 TRIM67Q6ZTA4 783 aa11.75□□□□□ -0.53
RPAP1-212ENST00000569829 ENAHQ8N8S7 591 aaPredicted RBP11.75□□□□□ -0.53
RPAP1-212ENST00000569829 IL17RAQ96F46 866 aa11.75□□□□□ -0.53
RPAP1-212ENST00000569829 TUT1Q9H6E5 874 aaKnown RBP11.75□□□□□ -0.53
RPAP1-212ENST00000569829 RC3H2Q9HBD1 1191 aaKnown RBP11.75□□□□□ -0.53
RPAP1-212ENST00000569829 CLEC1BQ9P126 229 aa11.75□□□□□ -0.53
RPAP1-212ENST00000569829 KMT2EQ8IZD2 1858 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 C5orf67F2Z3F1 127 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 SGSM2O43147 1006 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 PDGFBP01127 241 aaPredicted RBP11.74□□□□□ -0.53
RPAP1-212ENST00000569829 GATMP50440 423 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 HSD17B4P51659 736 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 SP4Q02446 784 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 PTH1RQ03431 593 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 SEMA3FQ13275 785 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 ADAM15Q13444 863 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 SMAD4Q13485 552 aaKnown RBP11.74□□□□□ -0.53
RPAP1-212ENST00000569829 UTP14CQ5TAP6 766 aaKnown RBP11.74□□□□□ -0.53
RPAP1-212ENST00000569829 RBM23Q86U06 439 aaKnown RBP11.74□□□□□ -0.53
RPAP1-212ENST00000569829 VSIG10LQ86VR7 867 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 MCF2L2Q86YR7 1114 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 LINC01599Q8WXQ3 324 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 MAP4K1Q92918 833 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 MSLNLQ96KJ4 702 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 UPF3BQ9BZI7 483 aaKnown RBP11.74□□□□□ -0.53
RPAP1-212ENST00000569829 MLXIPQ9HAP2 919 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 RTEL1Q9NZ71 1219 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 CD207Q9UJ71 328 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 BARX2Q9UMQ3 279 aaPredicted RBP11.74□□□□□ -0.53
RPAP1-212ENST00000569829 FAM50BQ9Y247 325 aa11.74□□□□□ -0.53
RPAP1-212ENST00000569829 MRPL11Q9Y3B7 192 aaKnown RBP11.74□□□□□ -0.53
RPAP1-212ENST00000569829 U3KPZ7 1027 aaPredicted RBP11.74□□□□□ -0.53
RPAP1-212ENST00000569829 DNAH14Q0VDD8 3507 aa11.73□□□□□ -0.53
RPAP1-212ENST00000569829 ENPP3O14638 875 aa11.73□□□□□ -0.53
RPAP1-212ENST00000569829 GLP2RO95838 553 aa11.73□□□□□ -0.53
RPAP1-212ENST00000569829 CYP21A2P08686 494 aa11.73□□□□□ -0.53
RPAP1-212ENST00000569829 NDUFV1P49821 464 aa11.73□□□□□ -0.53
RPAP1-212ENST00000569829 ZXDAP98168 799 aa11.73□□□□□ -0.53
RPAP1-212ENST00000569829 ARHGAP4P98171 946 aa11.73□□□□□ -0.53
RPAP1-212ENST00000569829 SEC23AQ15436 765 aa11.73□□□□□ -0.53
RPAP1-212ENST00000569829 CYFIP1Q7L576 1253 aa11.73□□□□□ -0.53
RPAP1-212ENST00000569829 FCHSD1Q86WN1 690 aa11.73□□□□□ -0.53
RPAP1-212ENST00000569829 ADGRA3Q8IWK6 1321 aa11.73□□□□□ -0.53
RPAP1-212ENST00000569829 LMBR1Q8WVP7 490 aa11.73□□□□□ -0.53
RPAP1-212ENST00000569829 KIAA1671Q9BY89 1806 aa11.73□□□□□ -0.53
RPAP1-212ENST00000569829 KAT14Q9H8E8 782 aa11.73□□□□□ -0.53
RPAP1-212ENST00000569829 PLAGL2Q9UPG8 496 aa11.73□□□□□ -0.53
RPAP1-212ENST00000569829 TTC3P53804 2025 aa11.72□□□□□ -0.53
RPAP1-212ENST00000569829 PER2O15055 1255 aa11.72□□□□□ -0.53
RPAP1-212ENST00000569829 GFRA3O60609 400 aa11.72□□□□□ -0.53
RPAP1-212ENST00000569829 ITGB1P05556 798 aa11.72□□□□□ -0.53
RPAP1-212ENST00000569829 IBSPP21815 317 aaPredicted RBP11.72□□□□□ -0.53
RPAP1-212ENST00000569829 PTPN5P54829 565 aa11.72□□□□□ -0.53
RPAP1-212ENST00000569829 ADAM17P78536 824 aa11.72□□□□□ -0.53
RPAP1-212ENST00000569829 MRPS9P82933 396 aaKnown RBP11.72□□□□□ -0.53
RPAP1-212ENST00000569829 BTG3Q14201 252 aaPredicted RBP11.72□□□□□ -0.53
RPAP1-212ENST00000569829 LPIN1Q14693 890 aa11.72□□□□□ -0.53
RPAP1-212ENST00000569829 PAN2Q504Q3 1202 aaKnown RBP11.72□□□□□ -0.53
RPAP1-212ENST00000569829 ASPRV1Q53RT3 343 aa11.72□□□□□ -0.53
RPAP1-212ENST00000569829 STOX1Q6ZVD7 989 aa11.72□□□□□ -0.53
RPAP1-212ENST00000569829 BMP8AQ7Z5Y6 402 aa11.72□□□□□ -0.53
RPAP1-212ENST00000569829 RTN4RL1Q86UN2 441 aaPredicted RBP11.72□□□□□ -0.53
RPAP1-212ENST00000569829 ZNF689Q96CS4 500 aaPredicted RBP11.72□□□□□ -0.53
RPAP1-212ENST00000569829 RPGRIP1Q96KN7 1286 aa11.72□□□□□ -0.53
RPAP1-212ENST00000569829 GPR20Q99678 358 aa11.72□□□□□ -0.53
RPAP1-212ENST00000569829 CDH22Q9UJ99 828 aa11.72□□□□□ -0.53
RPAP1-212ENST00000569829 MRPL42Q9Y6G3 142 aaKnown RBP11.72□□□□□ -0.53
RPAP1-212ENST00000569829 RIF1Q5UIP0 2472 aaKnown RBP11.71□□□□□ -0.53
RPAP1-212ENST00000569829 LOC730098B7Z3J9 87 aa11.71□□□□□ -0.53
RPAP1-212ENST00000569829 H0Y858 1186 aa11.71□□□□□ -0.53
RPAP1-212ENST00000569829 ST18O60284 1047 aa11.71□□□□□ -0.53
RPAP1-212ENST00000569829 PPFIA3O75145 1194 aa11.71□□□□□ -0.53
RPAP1-212ENST00000569829 MMP1P03956 469 aa11.71□□□□□ -0.53
RPAP1-212ENST00000569829 RB1P06400 928 aa11.71□□□□□ -0.53
RPAP1-212ENST00000569829 PARP1P09874 1014 aaKnown RBP11.71□□□□□ -0.53
RPAP1-212ENST00000569829 ARP10275 920 aa11.71□□□□□ -0.53
RPAP1-212ENST00000569829 SP100P23497 879 aaPredicted RBP11.71□□□□□ -0.53
RPAP1-212ENST00000569829 NRIP1P48552 1158 aa11.71□□□□□ -0.53
RPAP1-212ENST00000569829 MGAT3Q09327 533 aa11.71□□□□□ -0.53
RPAP1-212ENST00000569829 TRDNQ13061 729 aa11.71□□□□□ -0.53
RPAP1-212ENST00000569829 FAM26DQ5JW98 314 aa11.71□□□□□ -0.53
RPAP1-212ENST00000569829 CYB5R4Q7L1T6 521 aa11.71□□□□□ -0.53
RPAP1-212ENST00000569829 HOMER1Q86YM7 354 aa11.71□□□□□ -0.53
RPAP1-212ENST00000569829 VN1R2Q8NFZ6 395 aa11.71□□□□□ -0.53
RPAP1-212ENST00000569829 SPPL3Q8TCT6 385 aa11.71□□□□□ -0.53
RPAP1-212ENST00000569829 CLP1Q92989 425 aaKnown RBP11.71□□□□□ -0.53
RPAP1-212ENST00000569829 MTMR8Q96EF0 704 aa11.71□□□□□ -0.53
RPAP1-212ENST00000569829 POP1Q99575 1024 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms