RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 TELO2Q9Y4R8 837 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 BTBD19C9JJ37 291 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 EHHADHQ08426 723 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 SPATA1Q5VX52 437 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 RUSC1Q9BVN2 902 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 FGFBP2Q9BYJ0 223 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 TUFT1Q9NNX1 390 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 RWDD2AQ9UIY3 292 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 ZNFX1Q9P2E3 1918 aaKnown RBP12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 UNCXA6NJT0 531 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 CCNE2O96020 404 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 COASYQ13057 564 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 CT47A1Q5JQC4 288 aaPredicted RBP12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 MIER3Q7Z3K6 550 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 DRC7Q8IY82 874 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 NAP1L5Q96NT1 182 aaPredicted RBP12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 LXNQ9BS40 222 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 POLD4Q9HCU8 107 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 FBXO40Q9UH90 709 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 PFASO15067 1338 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 PVALEFA0A1B0GWK0 134 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 SOWAHBA6NEL2 793 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 PDHXO00330 501 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 PGK2P07205 417 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 EPHA7Q15375 998 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 CCDC144BQ3MJ40 725 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 SPRYD7Q5W111 196 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 XRRA1Q6P2D8 792 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 SYT2Q8N9I0 419 aaPredicted RBP12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 MCM3APO60318 1980 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 SORBS3O60504 671 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 CETPP11597 493 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 ALDH5A1P51649 535 aaPredicted RBP12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 CCDC47Q96A33 483 aaKnown RBP12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 PORCNQ9H237 461 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 INTS13Q9NVM9 706 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 STK24Q9Y6E0 443 aa12.19□□□□□ -0.46
PDXDC1-216ENST00000569715 SERPINC1P01008 464 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 CDC25BP30305 580 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 GTF2A2P52657 109 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 ERVK-9P63128 1117 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 ERVK-24P63145 666 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 LRRC41Q15345 812 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 CDKAL1Q5VV42 579 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 FAM43AQ8N2R8 423 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 GPRASP2Q96D09 838 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 PANK4Q9NVE7 773 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 TBC1D7Q9P0N9 293 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 EYA4O95677 639 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 UGCGQ16739 394 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 REEP2Q9BRK0 252 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 LRRC27Q9C0I9 530 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 SAMM50Q9Y512 469 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 RSPH10B2B2RC85 870 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 POTEB2H3BUK9 544 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 RSPH10BP0C881 870 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 KCNA2P16389 499 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 PTGS1P23219 599 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 WDR78Q5VTH9 848 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 CHADLQ6NUI6 762 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 FAM133AQ8N9E0 248 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 DNERQ8NFT8 737 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 FGD4Q96M96 766 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 PTPN18Q99952 460 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 TBC1D22BQ9NU19 505 aa12.18□□□□□ -0.46
PDXDC1-216ENST00000569715 KRT18P05783 430 aaKnown RBP12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 HUNKP57058 714 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 GIT2Q14161 759 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 SMCR8Q8TEV9 937 aaPredicted RBP12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 EEF2KMTQ96G04 330 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 EFCC1Q9HA90 598 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.17□□□□□ -0.461e-6■□□□□ 11.1
PDXDC1-216ENST00000569715 LOXHD1Q8IVV2 1947 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 PSMA7O14818 248 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 SLC25A27O95847 323 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 UBASH3AP57075 661 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 TTI2Q6NXR4 508 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 APTXQ7Z2E3 356 aaKnown RBP12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 NLRX1Q86UT6 975 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 PLXNB2O15031 1838 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 CDK11BP21127 795 aaKnown RBP12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 SP2Q02086 613 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 HS1BP3Q53T59 392 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 CCDC186Q7Z3E2 898 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 ANKRD13CQ8N6S4 541 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 MAF1Q9H063 256 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 KCNF1Q9H3M0 494 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 ZHX3Q9H4I2 956 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 BMP2KQ9NSY1 1161 aaPredicted RBP12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 PNMA3Q9UL41 463 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 PCDHA2Q9Y5H9 948 aa12.17□□□□□ -0.46
PDXDC1-216ENST00000569715 FRMD3A2A2Y4 597 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 TMEM150BA6NC51 233 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 SP4Q02446 784 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 STIM1Q13586 685 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 ARID5BQ14865 1188 aa12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 TPD52L1Q16890 204 aaPredicted RBP12.16□□□□□ -0.46
PDXDC1-216ENST00000569715 RINT1Q6NUQ1 792 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms