RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 POF1BQ8WVV4 589 aa10.65□□□□□ -0.7
TCF4-243ENST00000569357 APPBP2Q92624 585 aa10.65□□□□□ -0.7
TCF4-243ENST00000569357 CLP1Q92989 425 aaKnown RBP10.65□□□□□ -0.7
TCF4-243ENST00000569357 SPATA33Q96N06 139 aa10.65□□□□□ -0.7
TCF4-243ENST00000569357 HINFPQ9BQA5 517 aa10.65□□□□□ -0.7
TCF4-243ENST00000569357 NAPBQ9H115 298 aa10.65□□□□□ -0.7
TCF4-243ENST00000569357 PNMA2Q9UL42 364 aa10.65□□□□□ -0.7
TCF4-243ENST00000569357 M0R2C6 588 aa10.64□□□□□ -0.71
TCF4-243ENST00000569357 PPFIA4O75335 1185 aa10.64□□□□□ -0.71
TCF4-243ENST00000569357 SMIM10L2AP0DMW4 78 aa10.64□□□□□ -0.71
TCF4-243ENST00000569357 SMIM10L2BP0DMW5 78 aa10.64□□□□□ -0.71
TCF4-243ENST00000569357 IBSPP21815 317 aaPredicted RBP10.64□□□□□ -0.71
TCF4-243ENST00000569357 PUM1Q14671 1186 aaKnown RBP eCLIP10.64□□□□□ -0.71
TCF4-243ENST00000569357 PAN2Q504Q3 1202 aaKnown RBP10.64□□□□□ -0.71
TCF4-243ENST00000569357 ARHGEF16Q5VV41 709 aa10.64□□□□□ -0.71
TCF4-243ENST00000569357 BTNL9Q6UXG8 535 aa10.64□□□□□ -0.71
TCF4-243ENST00000569357 TBC1D5Q92609 795 aa10.64□□□□□ -0.71
TCF4-243ENST00000569357 P2RX5Q93086 422 aa10.64□□□□□ -0.71
TCF4-243ENST00000569357 NEK1Q96PY6 1258 aa10.64□□□□□ -0.71
TCF4-243ENST00000569357 RMDN3Q96TC7 470 aa10.64□□□□□ -0.71
TCF4-243ENST00000569357 SMOC2Q9H3U7 446 aa10.64□□□□□ -0.71
TCF4-243ENST00000569357 TOMM22Q9NS69 142 aa10.64□□□□□ -0.71
TCF4-243ENST00000569357 SORCS3Q9UPU3 1222 aa10.64□□□□□ -0.71
TCF4-243ENST00000569357 MRPL42Q9Y6G3 142 aaKnown RBP10.64□□□□□ -0.71
TCF4-243ENST00000569357 C5orf42Q9H799 3197 aa10.64□□□□□ -0.71
TCF4-243ENST00000569357 SPTBN4Q9H254 2564 aa10.64□□□□□ -0.71
TCF4-243ENST00000569357 CACNA1HO95180 2353 aa10.63□□□□□ -0.71
TCF4-243ENST00000569357 H3BRB1 525 aa10.63□□□□□ -0.71
TCF4-243ENST00000569357 RNF113AO15541 343 aaKnown RBP10.63□□□□□ -0.71
TCF4-243ENST00000569357 BRD1O95696 1058 aa10.63□□□□□ -0.71
TCF4-243ENST00000569357 NUDT7P0C024 238 aa10.63□□□□□ -0.71
TCF4-243ENST00000569357 GHRP10912 638 aa10.63□□□□□ -0.71
TCF4-243ENST00000569357 RLBP1P12271 317 aa10.63□□□□□ -0.71
TCF4-243ENST00000569357 EIF2AK2P19525 551 aaKnown RBP10.63□□□□□ -0.71
TCF4-243ENST00000569357 CTDSPL2Q05D32 466 aa10.63□□□□□ -0.71
TCF4-243ENST00000569357 HSDL1Q3SXM5 330 aa10.63□□□□□ -0.71
TCF4-243ENST00000569357 UBALD2Q8IYN6 164 aa10.63□□□□□ -0.71
TCF4-243ENST00000569357 FLCNQ8NFG4 579 aa10.63□□□□□ -0.71
TCF4-243ENST00000569357 SYTL5Q8TDW5 730 aaPredicted RBP10.63□□□□□ -0.71
TCF4-243ENST00000569357 SUSD6Q92537 303 aa10.63□□□□□ -0.71
TCF4-243ENST00000569357 EMID1Q96A84 441 aaPredicted RBP10.63□□□□□ -0.71
TCF4-243ENST00000569357 RNPEPQ9H4A4 650 aa10.63□□□□□ -0.71
TCF4-243ENST00000569357 TUT1Q9H6E5 874 aaKnown RBP10.63□□□□□ -0.71
TCF4-243ENST00000569357 COL20A1Q9P218 1284 aa10.63□□□□□ -0.71
TCF4-243ENST00000569357 RALGAPA2Q2PPJ7 1873 aa10.63□□□□□ -0.71
TCF4-243ENST00000569357 ENPP3O14638 875 aa10.62□□□□□ -0.71
TCF4-243ENST00000569357 RAB11FIP3O75154 756 aa10.62□□□□□ -0.71
TCF4-243ENST00000569357 CAND2O75155 1236 aa10.62□□□□□ -0.71
TCF4-243ENST00000569357 HMMRO75330 724 aa10.62□□□□□ -0.71
TCF4-243ENST00000569357 EIF3JO75822 258 aaKnown RBP10.62□□□□□ -0.71
TCF4-243ENST00000569357 DGKIO75912 1065 aa10.62□□□□□ -0.71
TCF4-243ENST00000569357 GGPS1O95749 300 aa10.62□□□□□ -0.71
TCF4-243ENST00000569357 SRGAP2BP0DMP2 458 aa10.62□□□□□ -0.71
TCF4-243ENST00000569357 MYCLP12524 364 aaPredicted RBP10.62□□□□□ -0.71
TCF4-243ENST00000569357 TECP42680 631 aa10.62□□□□□ -0.71
TCF4-243ENST00000569357 MYSM1Q5VVJ2 828 aa10.62□□□□□ -0.71
TCF4-243ENST00000569357 KBTBD3Q8NAB2 608 aa10.62□□□□□ -0.71
TCF4-243ENST00000569357 VN1R2Q8NFZ6 395 aa10.62□□□□□ -0.71
TCF4-243ENST00000569357 IWS1Q96ST2 819 aa10.62□□□□□ -0.71
TCF4-243ENST00000569357 SEC62Q99442 399 aaKnown RBP10.62□□□□□ -0.71
TCF4-243ENST00000569357 C16orf70Q9BSU1 422 aa10.62□□□□□ -0.71
TCF4-243ENST00000569357 MLXIPQ9HAP2 919 aa10.62□□□□□ -0.71
TCF4-243ENST00000569357 RC3H2Q9HBD1 1191 aaKnown RBP10.62□□□□□ -0.71
TCF4-243ENST00000569357 SETD4Q9NVD3 440 aa10.62□□□□□ -0.71
TCF4-243ENST00000569357 WDR19Q8NEZ3 1342 aa10.61□□□□□ -0.71
TCF4-243ENST00000569357 FAM186AA6NE01 2351 aa10.61□□□□□ -0.71
TCF4-243ENST00000569357 ATG2AQ2TAZ0 1938 aa10.61□□□□□ -0.71
TCF4-243ENST00000569357 LMNAP02545 664 aaKnown RBP10.61□□□□□ -0.71
TCF4-243ENST00000569357 ASGR2P07307 311 aa10.61□□□□□ -0.71
TCF4-243ENST00000569357 NR3C2P08235 984 aa10.61□□□□□ -0.71
TCF4-243ENST00000569357 TOP1P11387 765 aaKnown RBP10.61□□□□□ -0.71
TCF4-243ENST00000569357 ANGPT1Q15389 498 aa10.61□□□□□ -0.71
TCF4-243ENST00000569357 NAALADL2Q58DX5 795 aa10.61□□□□□ -0.71
TCF4-243ENST00000569357 RRP12Q5JTH9 1297 aaKnown RBP10.61□□□□□ -0.71
TCF4-243ENST00000569357 SPOUT1Q5T280 376 aaKnown RBP10.61□□□□□ -0.71
TCF4-243ENST00000569357 LLGL2Q6P1M3 1020 aa10.61□□□□□ -0.71
TCF4-243ENST00000569357 RGS22Q8NE09 1264 aa10.61□□□□□ -0.71
TCF4-243ENST00000569357 ZNF689Q96CS4 500 aaPredicted RBP10.61□□□□□ -0.71
TCF4-243ENST00000569357 TMEM47Q9BQJ4 181 aa10.61□□□□□ -0.71
TCF4-243ENST00000569357 CPVLQ9H3G5 476 aa10.61□□□□□ -0.71
TCF4-243ENST00000569357 NR2E1Q9Y466 385 aa10.61□□□□□ -0.71
TCF4-243ENST00000569357 SUPT16HQ9Y5B9 1047 aaKnown RBP10.61□□□□□ -0.71
TCF4-243ENST00000569357 TRIOO75962 3097 aa10.61□□□□□ -0.71
TCF4-243ENST00000569357 CACNA1BQ00975 2339 aa10.61□□□□□ -0.71
TCF4-243ENST00000569357 RIF1Q5UIP0 2472 aaKnown RBP10.6□□□□□ -0.71
TCF4-243ENST00000569357 NOP56O00567 594 aaKnown RBP10.6□□□□□ -0.71
TCF4-243ENST00000569357 CHRNA1P02708 482 aa10.6□□□□□ -0.71
TCF4-243ENST00000569357 LGALS2P05162 132 aa10.6□□□□□ -0.71
TCF4-243ENST00000569357 ZFYP08048 801 aaPredicted RBP10.6□□□□□ -0.71
TCF4-243ENST00000569357 GOLGA8HP0CJ92 632 aa10.6□□□□□ -0.71
TCF4-243ENST00000569357 GNAT1P11488 350 aa10.6□□□□□ -0.71
TCF4-243ENST00000569357 HOXD8P13378 290 aaPredicted RBP10.6□□□□□ -0.71
TCF4-243ENST00000569357 CLCN5P51795 746 aa10.6□□□□□ -0.71
TCF4-243ENST00000569357 ARHGAP4P98171 946 aa10.6□□□□□ -0.71
TCF4-243ENST00000569357 CELF3Q5SZQ8 465 aaKnown RBP10.6□□□□□ -0.71
TCF4-243ENST00000569357 ANKRD54Q6NXT1 300 aa10.6□□□□□ -0.71
TCF4-243ENST00000569357 MCF2L2Q86YR7 1114 aa10.6□□□□□ -0.71
TCF4-243ENST00000569357 CMTR2Q8IYT2 770 aaKnown RBP10.6□□□□□ -0.71
TCF4-243ENST00000569357 ATP8B4Q8TF62 1192 aa10.6□□□□□ -0.71
TCF4-243ENST00000569357 ZFP91Q96JP5 570 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms