RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 LGR5O75473 907 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 BAIAP3O94812 1187 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 PARNO95453 639 aaKnown RBP8.95□□□□□ -0.98
CDH3-209ENST00000569080 FOSP01100 380 aaPredicted RBP8.95□□□□□ -0.98
CDH3-209ENST00000569080 MYOGP15173 224 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 ATP2A2P16615 1042 aaKnown RBP8.95□□□□□ -0.98
CDH3-209ENST00000569080 IFNAR1P17181 557 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 PSMA5P28066 241 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 TCF7P36402 384 aaPredicted RBP8.95□□□□□ -0.98
CDH3-209ENST00000569080 WDR5P61964 334 aaKnown RBP8.95□□□□□ -0.98
CDH3-209ENST00000569080 FGD1P98174 961 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 SP4Q02446 784 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 ADGRE1Q14246 886 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 CEP55Q53EZ4 464 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 RETREG2Q8NC44 543 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 GIMAP8Q8ND71 665 aaPredicted RBP8.95□□□□□ -0.98
CDH3-209ENST00000569080 LMBR1Q8WVP7 490 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 IL17RAQ96F46 866 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 SLC9A7Q96T83 725 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 MXRA8Q9BRK3 442 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 RNF26Q9BY78 433 aaPredicted RBP8.95□□□□□ -0.98
CDH3-209ENST00000569080 OSBPL7Q9BZF2 842 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 UPF3BQ9BZI7 483 aaKnown RBP8.95□□□□□ -0.98
CDH3-209ENST00000569080 TM6SF1Q9BZW5 370 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 NKX2-4Q9H2Z4 354 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 RNPEPQ9H4A4 650 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 NCOA5Q9HCD5 579 aaKnown RBP8.95□□□□□ -0.98
CDH3-209ENST00000569080 JPH1Q9HDC5 661 aaPredicted RBP8.95□□□□□ -0.98
CDH3-209ENST00000569080 KCNH7Q9NS40 1196 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 PKD2L1Q9P0L9 805 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 PCDHA11Q9Y5I1 949 aa8.95□□□□□ -0.98
CDH3-209ENST00000569080 ZBBXA8MT70 800 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 FAM86B1E9PN63 330 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 MEIS1O00470 390 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 MAFGO15525 162 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 PPFIA3O75145 1194 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 FAM86B2P0C5J1 330 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 ARP10275 920 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 FOSL2P15408 326 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 DEFB103AP81534 67 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 ARHGAP4P98171 946 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 NPY5RQ15761 445 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 UTP14CQ5TAP6 766 aaKnown RBP8.94□□□□□ -0.98
CDH3-209ENST00000569080 CNKSR3Q6P9H4 555 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 NIPA1Q7RTP0 329 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 HERC6Q8IVU3 1022 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 USP38Q8NB14 1042 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 MAFAQ8NHW3 353 aaPredicted RBP8.94□□□□□ -0.98
CDH3-209ENST00000569080 PHOSPHO2Q8TCD6 241 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 SEPT1Q8WYJ6 367 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 ATP6V0A1Q93050 837 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 GLT8D2Q9H1C3 349 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 PRDM12Q9H4Q4 367 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 EHMT1Q9H9B1 1298 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 AGO4Q9HCK5 861 aaKnown RBP8.94□□□□□ -0.98
CDH3-209ENST00000569080 SETD4Q9NVD3 440 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 ZNF215Q9UL58 517 aaPredicted RBP8.94□□□□□ -0.98
CDH3-209ENST00000569080 NAP1L2Q9ULW6 460 aaPredicted RBP8.94□□□□□ -0.98
CDH3-209ENST00000569080 NFASCO94856 1347 aa8.94□□□□□ -0.98
CDH3-209ENST00000569080 WDR81Q562E7 1941 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 MBLAC1A4D2B0 266 aaPredicted RBP8.93□□□□□ -0.98
CDH3-209ENST00000569080 DHX15O43143 795 aaKnown RBP8.93□□□□□ -0.98
CDH3-209ENST00000569080 CAND2O75155 1236 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 CCNE2O96020 404 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 CA3P07451 260 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 CYP3A4P08684 503 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 ACTN1P12814 892 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 MARK3P27448 753 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 THPOP40225 353 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 ACTR2P61160 394 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 CCT2P78371 535 aaKnown RBP8.93□□□□□ -0.98
CDH3-209ENST00000569080 PLEKHG4Q58EX7 1191 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 MARCH8Q5T0T0 291 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 JAKMIP3Q5VZ66 844 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 RUFY4Q6ZNE9 571 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 SPRED2Q7Z698 418 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 TMCO2Q7Z6W1 182 aaPredicted RBP8.93□□□□□ -0.98
CDH3-209ENST00000569080 RPAINQ86UA6 219 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 REXO1Q8N1G1 1221 aaKnown RBP8.93□□□□□ -0.98
CDH3-209ENST00000569080 SLC17A8Q8NDX2 589 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 RASGRP4Q8TDF6 673 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 LENG9Q96B70 501 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 SLC26A6Q9BXS9 759 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 FTOQ9C0B1 505 aaKnown RBP eCLIP8.93□□□□□ -0.98
CDH3-209ENST00000569080 ERAP1Q9NZ08 941 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 VPS54Q9P1Q0 977 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 SLC9A2Q9UBY0 812 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 MSRAQ9UJ68 235 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 CYP46A1Q9Y6A2 500 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 NRCAMQ92823 1304 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 KAT6AQ92794 2004 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 MYO9BQ13459 2157 aa8.93□□□□□ -0.98
CDH3-209ENST00000569080 IGKV6D-21A0A0A0MT36 114 aa8.92□□□□□ -0.98
CDH3-209ENST00000569080 LCHNA4D1U4 455 aa8.92□□□□□ -0.98
CDH3-209ENST00000569080 EPOPA6NHQ4 379 aa8.92□□□□□ -0.98
CDH3-209ENST00000569080 RSPH10B2B2RC85 870 aa8.92□□□□□ -0.98
CDH3-209ENST00000569080 M0R2N6 131 aa8.92□□□□□ -0.98
CDH3-209ENST00000569080 ATG7O95352 703 aa8.92□□□□□ -0.98
CDH3-209ENST00000569080 CTSHP09668 335 aa8.92□□□□□ -0.98
CDH3-209ENST00000569080 RSPH10BP0C881 870 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms