RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 POTEFA5A3E0 1075 aa20.16■□□□□ 0.82
PKD1-235ENST00000568591 PLA2G4BP0C869 781 aa20.16■□□□□ 0.82
PKD1-235ENST00000568591 POTEIP0CG38 1075 aa20.16■□□□□ 0.82
PKD1-235ENST00000568591 SLC9A1P19634 815 aa20.16■□□□□ 0.82
PKD1-235ENST00000568591 LIG3P49916 1009 aa20.16■□□□□ 0.82
PKD1-235ENST00000568591 ZNF543Q08ER8 600 aa20.16■□□□□ 0.82
PKD1-235ENST00000568591 KLHL30Q0D2K2 578 aa20.16■□□□□ 0.82
PKD1-235ENST00000568591 NNTQ13423 1086 aa20.16■□□□□ 0.82
PKD1-235ENST00000568591 TTC31Q49AM3 519 aaPredicted RBP20.16■□□□□ 0.82
PKD1-235ENST00000568591 MEI1Q5TIA1 1274 aa20.16■□□□□ 0.82
PKD1-235ENST00000568591 PPP4R3AQ6IN85 833 aa20.16■□□□□ 0.82
PKD1-235ENST00000568591 POTEGQ6S5H5 508 aa20.16■□□□□ 0.82
PKD1-235ENST00000568591 POTEEQ6S8J3 1075 aa20.16■□□□□ 0.82
PKD1-235ENST00000568591 PNMA6FA0A0J9YX94 578 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 RAD51CO43502 376 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 OPA1O60313 960 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 IL1R1P14778 569 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 GABPAQ06546 454 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 ADAM9Q13443 819 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 ASPRV1Q53RT3 343 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 ARSHQ5FYA8 562 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 PRR5LQ6MZQ0 368 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 IQCKQ8N0W5 287 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 GANQ9H2C0 597 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 FAM169AQ9Y6X4 670 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 MYH7BA7E2Y1 1941 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 MEIS1O00470 390 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 ZEB2O60315 1214 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 MED24O75448 989 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 TAL1P17542 331 aaPredicted RBP20.15■□□□□ 0.82
PKD1-235ENST00000568591 CYP11B2P19099 503 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 PSMC6P62333 389 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 PTK2Q05397 1052 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 EDEM3Q9BZQ6 932 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 EMILIN3Q9NT22 766 aa20.15■□□□□ 0.82
PKD1-235ENST00000568591 GTF2IP78347 998 aa20.14■□□□□ 0.82
PKD1-235ENST00000568591 GUCY1A3Q02108 690 aa20.14■□□□□ 0.82
PKD1-235ENST00000568591 KCNH2Q12809 1159 aa20.14■□□□□ 0.82
PKD1-235ENST00000568591 ALS2CLQ60I27 953 aa20.14■□□□□ 0.82
PKD1-235ENST00000568591 IFT20Q8IY31 132 aa20.14■□□□□ 0.82
PKD1-235ENST00000568591 RPGRQ92834 1020 aaKnown RBP20.14■□□□□ 0.82
PKD1-235ENST00000568591 RNPC3Q96LT9 517 aaKnown RBP20.14■□□□□ 0.82
PKD1-235ENST00000568591 PSTPIP2Q9H939 334 aa20.14■□□□□ 0.82
PKD1-235ENST00000568591 GGA1Q9UJY5 639 aa20.14■□□□□ 0.82
PKD1-235ENST00000568591 PCDHGC5Q9Y5F6 944 aa20.14■□□□□ 0.82
PKD1-235ENST00000568591 GAKO14976 1311 aa20.14■□□□□ 0.81
PKD1-235ENST00000568591 AHDC1Q5TGY3 1603 aaPredicted RBP20.14■□□□□ 0.81
PKD1-235ENST00000568591 EPB41P11171 864 aaKnown RBP20.14■□□□□ 0.81
PKD1-235ENST00000568591 TNFRSF8P28908 595 aa20.14■□□□□ 0.81
PKD1-235ENST00000568591 ZNF571Q7Z3V5 609 aaPredicted RBP20.14■□□□□ 0.81
PKD1-235ENST00000568591 MICALL1Q8N3F8 863 aa20.14■□□□□ 0.81
PKD1-235ENST00000568591 CUL5Q93034 780 aa20.14■□□□□ 0.81
PKD1-235ENST00000568591 AJAP1Q9UKB5 411 aaPredicted RBP20.14■□□□□ 0.81
PKD1-235ENST00000568591 IGKV6D-41A0A0C4DH26 115 aa20.13■□□□□ 0.81
PKD1-235ENST00000568591 SNAP25P60880 206 aa20.13■□□□□ 0.81
PKD1-235ENST00000568591 CFAP58Q5T655 872 aa20.13■□□□□ 0.81
PKD1-235ENST00000568591 TADA2BQ86TJ2 420 aa20.13■□□□□ 0.81
PKD1-235ENST00000568591 DDX42Q86XP3 938 aaKnown RBP eCLIP20.13■□□□□ 0.81
PKD1-235ENST00000568591 RUBCNQ92622 972 aa20.13■□□□□ 0.81
PKD1-235ENST00000568591 KAT2BQ92831 832 aa20.13■□□□□ 0.81
PKD1-235ENST00000568591 P2RX7Q99572 595 aaKnown RBP20.13■□□□□ 0.81
PKD1-235ENST00000568591 hCG_1984214I3L0E3 225 aa20.13■□□□□ 0.81
PKD1-235ENST00000568591 EBAG9O00559 213 aa20.13■□□□□ 0.81
PKD1-235ENST00000568591 MPHOSPH10O00566 681 aaKnown RBP20.13■□□□□ 0.81
PKD1-235ENST00000568591 KCNK3O14649 394 aa20.13■□□□□ 0.81
PKD1-235ENST00000568591 RIMBP2O15034 1052 aa20.13■□□□□ 0.81
PKD1-235ENST00000568591 RGL2O15211 777 aa20.13■□□□□ 0.81
PKD1-235ENST00000568591 PLCG2P16885 1265 aa20.13■□□□□ 0.81
PKD1-235ENST00000568591 ZNF713Q8N859 430 aaPredicted RBP20.13■□□□□ 0.81
PKD1-235ENST00000568591 PPM1EQ8WY54 764 aa20.13■□□□□ 0.81
PKD1-235ENST00000568591 IKZF4Q9H2S9 585 aa20.13■□□□□ 0.81
PKD1-235ENST00000568591 FAM196BA6NMK8 535 aa20.12■□□□□ 0.81
PKD1-235ENST00000568591 TTLL1O95922 423 aa20.12■□□□□ 0.81
PKD1-235ENST00000568591 NR2F2P24468 414 aa20.12■□□□□ 0.81
PKD1-235ENST00000568591 ASIC2Q16515 512 aa20.12■□□□□ 0.81
PKD1-235ENST00000568591 DPY19L2P1Q6NXN4 242 aa20.12■□□□□ 0.81
PKD1-235ENST00000568591 FAM196AQ6ZSG2 479 aa20.12■□□□□ 0.81
PKD1-235ENST00000568591 SYN2Q92777 582 aaPredicted RBP20.12■□□□□ 0.81
PKD1-235ENST00000568591 NHSQ6T4R5 1651 aa20.12■□□□□ 0.81
PKD1-235ENST00000568591 C6orf229H3BNL8 230 aa20.12■□□□□ 0.81
PKD1-235ENST00000568591 HOXD13P35453 343 aa20.12■□□□□ 0.81
PKD1-235ENST00000568591 GLE1Q53GS7 698 aaKnown RBP20.12■□□□□ 0.81
PKD1-235ENST00000568591 C15orf52Q6ZUT6 534 aaKnown RBP20.12■□□□□ 0.81
PKD1-235ENST00000568591 CCDC65Q8IXS2 484 aa20.12■□□□□ 0.81
PKD1-235ENST00000568591 EFCAB13Q8IY85 973 aa20.12■□□□□ 0.81
PKD1-235ENST00000568591 OR2W6PQ8NHA6 318 aa20.12■□□□□ 0.81
PKD1-235ENST00000568591 TBC1D16Q8TBP0 767 aa20.12■□□□□ 0.81
PKD1-235ENST00000568591 RBM46Q8TBY0 533 aaKnown RBP20.12■□□□□ 0.81
PKD1-235ENST00000568591 CEP63Q96MT8 703 aa20.12■□□□□ 0.81
PKD1-235ENST00000568591 AP1M1Q9BXS5 423 aa20.12■□□□□ 0.81
PKD1-235ENST00000568591 BMP2KQ9NSY1 1161 aaPredicted RBP20.12■□□□□ 0.81
PKD1-235ENST00000568591 KRT18P05783 430 aaKnown RBP20.11■□□□□ 0.81
PKD1-235ENST00000568591 EPS15P42566 896 aa20.11■□□□□ 0.81
PKD1-235ENST00000568591 GJB7Q6PEY0 223 aa20.11■□□□□ 0.81
PKD1-235ENST00000568591 IRF2BP2Q7Z5L9 587 aa20.11■□□□□ 0.81
PKD1-235ENST00000568591 USP38Q8NB14 1042 aa20.11■□□□□ 0.81
PKD1-235ENST00000568591 FAM163AQ96GL9 167 aaPredicted RBP20.11■□□□□ 0.81
PKD1-235ENST00000568591 LRRC27Q9C0I9 530 aa20.11■□□□□ 0.81
PKD1-235ENST00000568591 AIPL1Q9NZN9 384 aa20.11■□□□□ 0.81
PKD1-235ENST00000568591 TSKSQ9UJT2 592 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms