RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 PLCB1Q9NQ66 1216 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 PANK4Q9NVE7 773 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 MTMR4Q9NYA4 1195 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 STIM2Q9P246 746 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 SERPINB13Q9UIV8 391 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 FBXL5Q9UKA1 691 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 PNMA3Q9UL41 463 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 DNM3Q9UQ16 869 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 MAPK8IP1Q9UQF2 711 aa8.41□□□□□ -1.06
ATXN3-250ENST00000568290 ROBO1Q9Y6N7 1651 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 UBE4BO95155 1302 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 MACROD2A1Z1Q3 448 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 USP17L3A6NCW0 530 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 USP17L4A6NCW7 530 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 TRIM49BA6NDI0 452 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 TULP2O00295 520 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 KIAA0754O94854 1291 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 ATP1A1P05023 1023 aaKnown RBP8.4□□□□□ -1.06
ATXN3-250ENST00000568290 CYP2D6P10635 497 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 ALDH1B1P30837 517 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 ZNF543Q08ER8 600 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 KLHL30Q0D2K2 578 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 STK4Q13043 487 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 CUL1Q13616 776 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 ASIC2Q16515 512 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 FAM98CQ17RN3 349 aaKnown RBP8.4□□□□□ -1.06
ATXN3-250ENST00000568290 MFSD14BQ5SR56 506 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 WDR59Q6PJI9 974 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 RUFY4Q6ZNE9 571 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 USP17L1Q7RTZ2 530 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 MAATS1Q7Z4T9 603 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 C3orf20Q8ND61 904 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 ZNF384Q8TF68 577 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 SHISA4Q96DD7 197 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 RUNDC3BQ96NL0 473 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 SPAG5Q96R06 1193 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 PIGSQ96S52 555 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 OSBPL9Q96SU4 736 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 PNKPQ96T60 521 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 IRX2Q9BZI1 471 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-250ENST00000568290 FAM204AQ9H8W3 233 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 PSTPIP2Q9H939 334 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 SLC39A2Q9NP94 309 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 KCND2Q9NZV8 630 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 SEL1LQ9UBV2 794 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 SEPT9Q9UHD8 586 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-250ENST00000568290 HPCAL4Q9UM19 191 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 SIK3Q9Y2K2 1263 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 ATP6V0A2Q9Y487 856 aa8.4□□□□□ -1.06
ATXN3-250ENST00000568290 COL24A1Q17RW2 1714 aa8.4□□□□□ -1.07
ATXN3-250ENST00000568290 NRAPQ86VF7 1730 aa8.4□□□□□ -1.07
ATXN3-250ENST00000568290 ATXN2Q99700 1313 aaKnown RBP8.39□□□□□ -1.07
ATXN3-250ENST00000568290 IRS2Q9Y4H2 1338 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 A0A0A6YYK5 440 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-250ENST00000568290 GTPBP10A4D1E9 387 aaKnown RBP8.39□□□□□ -1.07
ATXN3-250ENST00000568290 HMGB1P1B2RPK0 211 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-250ENST00000568290 PDXKO00764 312 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 CYTH3O43739 400 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 TBCAO75347 108 aaKnown RBP8.39□□□□□ -1.07
ATXN3-250ENST00000568290 PDHBP11177 359 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 TM4SF1P30408 202 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 HOXA10P31260 410 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-250ENST00000568290 EIF4A3P38919 411 aaKnown RBP8.39□□□□□ -1.07
ATXN3-250ENST00000568290 TNNI2P48788 182 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 NPEPPSP55786 919 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 FKBP1AP62942 108 aaKnown RBP8.39□□□□□ -1.07
ATXN3-250ENST00000568290 HDLBPQ00341 1268 aaKnown RBP8.39□□□□□ -1.07
ATXN3-250ENST00000568290 GRB10Q13322 594 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 ALCAMQ13740 583 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 SLC18A3Q16572 532 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 MIIPQ5JXC2 388 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 SLC27A3Q5K4L6 730 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 SPDYCQ5MJ68 293 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 NCAPH2Q6IBW4 605 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 HHIPL2Q6UWX4 724 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 LRIG3Q6UXM1 1119 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 SP8Q8IXZ3 490 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 SLC17A8Q8NDX2 589 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 SPATA4Q8NEY3 305 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 RBM46Q8TBY0 533 aaKnown RBP8.39□□□□□ -1.07
ATXN3-250ENST00000568290 RASGRP4Q8TDF6 673 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 TBC1D5Q92609 795 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 DYNLL2Q96FJ2 89 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 CEP95Q96GE4 821 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 ZC3H12CQ9C0D7 883 aaKnown RBP8.39□□□□□ -1.07
ATXN3-250ENST00000568290 KANSL2Q9H9L4 492 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 EFCC1Q9HA90 598 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 AGPAT5Q9NUQ2 364 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 AIPL1Q9NZN9 384 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 BIN2Q9UBW5 565 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-250ENST00000568290 ARMCX3Q9UH62 379 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-250ENST00000568290 PNMA2Q9UL42 364 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 FAN1Q9Y2M0 1017 aa8.39□□□□□ -1.07
ATXN3-250ENST00000568290 CYP3A7-CYP3A51PA0A087WV96 503 aa8.38□□□□□ -1.07
ATXN3-250ENST00000568290 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.38□□□□□ -1.07
ATXN3-250ENST00000568290 GOLGA6L10A0A0M3HER8 536 aa8.38□□□□□ -1.07
ATXN3-250ENST00000568290 RCCD1A6NED2 376 aa8.38□□□□□ -1.07
ATXN3-250ENST00000568290 MYMKA6NI61 221 aa8.38□□□□□ -1.07
ATXN3-250ENST00000568290 SPDYE3A6NKU9 549 aa8.38□□□□□ -1.07
ATXN3-250ENST00000568290 LRRC53A6NM62 1247 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms