RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 DAPK3O43293 454 aa13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 STK10O94804 968 aaKnown RBP13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 MT-ND3P03897 115 aa13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 DLATP10515 647 aaKnown RBP13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 GCFC2P16383 781 aaKnown RBP13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 LRRN4CLQ8ND94 238 aa13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 NUDCD1Q96RS6 583 aa13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 CYP2D7A0A087X1C5 515 aa13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 LMNB2Q03252 620 aa13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 TTBK2Q6IQ55 1244 aa13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 MB21D2Q8IYB1 491 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 MS4A14Q96JA4 679 aa13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 LRRC37BQ96QE4 947 aa13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 PFDN4Q9NQP4 134 aa13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 SMARCAL1Q9NZC9 954 aa13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 TUBE1Q9UJT0 475 aa13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 ATP5HO75947 161 aa13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 UFL1O94874 794 aa13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 DYNLL1P63167 89 aaKnown RBP13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 C1orf112Q9NSG2 853 aa13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 ADD3Q9UEY8 706 aaKnown RBP13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 CAPN11Q9UMQ6 739 aa13.41□□□□□ -0.26
CSPG4P13-202ENST00000567704 MED14O60244 1454 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 hCG_2014768A0A024R1R8 64 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 BRAFP15056 766 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 TMOD1P28289 359 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 PSMC2P35998 433 aaKnown RBP13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 SPARCL1Q14515 664 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 ODR4Q5SWX8 454 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 MAML1Q92585 1016 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 XAB2Q9HCS7 855 aaKnown RBP13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 RASA4BC9J798 803 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 PODXLO00592 558 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 RASA4O43374 803 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 RNF8O76064 485 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 BRD2P25440 801 aaKnown RBP13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 SNX16P57768 344 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 ZYXQ15942 572 aaKnown RBP13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 CXorf38Q8TB03 319 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 ZIM3Q96PE6 472 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 MYCLP12524 364 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 ZNF211Q13398 564 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 SLC30A9Q6PML9 568 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 SLFN12Q8IYM2 578 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 ENGASEQ8NFI3 743 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 OR2W6PQ8NHA6 318 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 SEC16BQ96JE7 1060 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 PIH1D3Q9NQM4 214 aaKnown RBP13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 AMACRQ9UHK6 382 aa13.4□□□□□ -0.26
CSPG4P13-202ENST00000567704 PCP11498 1178 aaKnown RBP13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 DYNC1I2Q13409 638 aaKnown RBP13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 FAM83BQ5T0W9 1011 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 CEP72Q9P209 647 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 TAF6LQ9Y6J9 622 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 SLC4A7Q9Y6M7 1214 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 UBN2Q6ZU65 1347 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 LMTK2Q8IWU2 1503 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 LRRIQ3A6PVS8 624 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 ESRRGP62508 458 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 CYFIP2Q96F07 1278 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 FGD4Q96M96 766 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 LIMA1Q9UHB6 759 aaKnown RBP13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 KIDINS220Q9ULH0 1771 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 A0A1W2PQC6 194 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 GRID2IPA4D2P6 1211 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 HADHQ16836 314 aaKnown RBP13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 PPWD1Q96BP3 646 aaKnown RBP13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 RNPC3Q96LT9 517 aaKnown RBP13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 TGS1Q96RS0 853 aaKnown RBP13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 IWS1Q96ST2 819 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 ANLNQ9NQW6 1124 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 PHEXP78562 749 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 TEX2Q8IWB9 1127 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 ZFP69BQ9UJL9 534 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 DCTN4Q9UJW0 460 aa13.39□□□□□ -0.27
CSPG4P13-202ENST00000567704 NPHP4O75161 1426 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 IGKV5-2P06315 115 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 DDB1Q16531 1140 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 STRBPQ96SI9 672 aaKnown RBP13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 KRT19P08727 400 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 PLS3P13797 630 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 EXOSC10Q01780 885 aaKnown RBP13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 PSMD2Q13200 908 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 SCYL2Q6P3W7 929 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 TEKT1Q969V4 418 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 LCMT1Q9UIC8 334 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 TTC36A6NLP5 189 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 MEIS1O00470 390 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 SPAG7O75391 227 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 CARSP49589 748 aaKnown RBP13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 PDE1BQ01064 536 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 PTK2Q05397 1052 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 TMC4Q7Z404 712 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 TRIM42Q8IWZ5 723 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 LBHD1Q9BQE6 289 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 UBE2TQ9NPD8 197 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 PPARGC1AQ9UBK2 798 aaKnown RBP13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 NEDD4P46934 1319 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 STK36Q9NRP7 1315 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms