RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 ADD1P35611 737 aaKnown RBP12.78□□□□□ -0.36
CDH3-206ENST00000567674 ADAM17P78536 824 aa12.78□□□□□ -0.36
CDH3-206ENST00000567674 MRPS5P82675 430 aaKnown RBP12.78□□□□□ -0.36
CDH3-206ENST00000567674 SETQ01105 290 aaPredicted RBP12.78□□□□□ -0.36
CDH3-206ENST00000567674 COL9A3Q14050 684 aaPredicted RBP12.78□□□□□ -0.36
CDH3-206ENST00000567674 GRIN2CQ14957 1233 aa12.78□□□□□ -0.36
CDH3-206ENST00000567674 ANKRD1Q15327 319 aa12.78□□□□□ -0.36
CDH3-206ENST00000567674 NTRK3Q16288 839 aa12.78□□□□□ -0.36
CDH3-206ENST00000567674 TRIM71Q2Q1W2 868 aaKnown RBP12.78□□□□□ -0.36
CDH3-206ENST00000567674 CNKSR3Q6P9H4 555 aa12.78□□□□□ -0.36
CDH3-206ENST00000567674 TRIM22Q8IYM9 498 aa12.78□□□□□ -0.36
CDH3-206ENST00000567674 ZNF710Q8N1W2 664 aa12.78□□□□□ -0.36
CDH3-206ENST00000567674 CRYGNQ8WXF5 182 aa12.78□□□□□ -0.36
CDH3-206ENST00000567674 PIBF1Q8WXW3 757 aa12.78□□□□□ -0.36
CDH3-206ENST00000567674 VWCEQ96DN2 955 aa12.78□□□□□ -0.36
CDH3-206ENST00000567674 PBX4Q9BYU1 374 aa12.78□□□□□ -0.36
CDH3-206ENST00000567674 KCNH7Q9NS40 1196 aa12.78□□□□□ -0.36
CDH3-206ENST00000567674 RTEL1Q9NZ71 1219 aa12.78□□□□□ -0.36
CDH3-206ENST00000567674 UMODL1Q5DID0 1318 aa12.78□□□□□ -0.36
CDH3-206ENST00000567674 ATG7O95352 703 aa12.77□□□□□ -0.37
CDH3-206ENST00000567674 ACRP10323 421 aa12.77□□□□□ -0.37
CDH3-206ENST00000567674 ATP2A2P16615 1042 aaKnown RBP12.77□□□□□ -0.37
CDH3-206ENST00000567674 POU3F3P20264 500 aaPredicted RBP12.77□□□□□ -0.37
CDH3-206ENST00000567674 CIITAP33076 1130 aa12.77□□□□□ -0.37
CDH3-206ENST00000567674 USP11P51784 963 aa12.77□□□□□ -0.37
CDH3-206ENST00000567674 APOBRQ0VD83 1088 aa12.77□□□□□ -0.37
CDH3-206ENST00000567674 IKBKEQ14164 716 aa12.77□□□□□ -0.37
CDH3-206ENST00000567674 FAM26DQ5JW98 314 aa12.77□□□□□ -0.37
CDH3-206ENST00000567674 OTOP2Q7RTS6 562 aa12.77□□□□□ -0.37
CDH3-206ENST00000567674 APBB2Q92870 758 aa12.77□□□□□ -0.37
CDH3-206ENST00000567674 ATP6V0A1Q93050 837 aa12.77□□□□□ -0.37
CDH3-206ENST00000567674 SCLYQ96I15 445 aa12.77□□□□□ -0.37
CDH3-206ENST00000567674 SDF4Q9BRK5 362 aa12.77□□□□□ -0.37
CDH3-206ENST00000567674 RNPEPQ9H4A4 650 aa12.77□□□□□ -0.37
CDH3-206ENST00000567674 SLC28A3Q9HAS3 691 aa12.77□□□□□ -0.37
CDH3-206ENST00000567674 TBC1D22BQ9NU19 505 aa12.77□□□□□ -0.37
CDH3-206ENST00000567674 SQORQ9Y6N5 450 aa12.77□□□□□ -0.37
CDH3-206ENST00000567674 LGR5O75473 907 aa12.76□□□□□ -0.37
CDH3-206ENST00000567674 CDKL5O76039 1030 aa12.76□□□□□ -0.37
CDH3-206ENST00000567674 SMIM10L2AP0DMW4 78 aa12.76□□□□□ -0.37
CDH3-206ENST00000567674 SMIM10L2BP0DMW5 78 aa12.76□□□□□ -0.37
CDH3-206ENST00000567674 TCF7P36402 384 aaPredicted RBP12.76□□□□□ -0.37
CDH3-206ENST00000567674 ARHGAP4P98171 946 aa12.76□□□□□ -0.37
CDH3-206ENST00000567674 RSPH3Q86UC2 560 aa12.76□□□□□ -0.37
CDH3-206ENST00000567674 SKAP1Q86WV1 359 aa12.76□□□□□ -0.37
CDH3-206ENST00000567674 REXO1Q8N1G1 1221 aaKnown RBP12.76□□□□□ -0.37
CDH3-206ENST00000567674 NME8Q8N427 588 aa12.76□□□□□ -0.37
CDH3-206ENST00000567674 DHX38Q92620 1227 aaKnown RBP12.76□□□□□ -0.37
CDH3-206ENST00000567674 GPKOWQ92917 476 aaPredicted RBP eCLIP12.76□□□□□ -0.37
CDH3-206ENST00000567674 ALG1Q9BT22 464 aa12.76□□□□□ -0.37
CDH3-206ENST00000567674 ANO3Q9BYT9 981 aa12.76□□□□□ -0.37
CDH3-206ENST00000567674 FTOQ9C0B1 505 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDH3-206ENST00000567674 AZI2Q9H6S1 392 aa12.76□□□□□ -0.37
CDH3-206ENST00000567674 JPH1Q9HDC5 661 aaPredicted RBP12.76□□□□□ -0.37
CDH3-206ENST00000567674 CXXC1Q9P0U4 656 aaPredicted RBP12.76□□□□□ -0.37
CDH3-206ENST00000567674 SLC9A2Q9UBY0 812 aa12.76□□□□□ -0.37
CDH3-206ENST00000567674 MYH7BA7E2Y1 1941 aa12.76□□□□□ -0.37
CDH3-206ENST00000567674 CHD9Q3L8U1 2897 aa12.75□□□□□ -0.37
CDH3-206ENST00000567674 IGKV6D-21A0A0A0MT36 114 aa12.75□□□□□ -0.37
CDH3-206ENST00000567674 MBLAC1A4D2B0 266 aaPredicted RBP12.75□□□□□ -0.37
CDH3-206ENST00000567674 RSPH10B2B2RC85 870 aa12.75□□□□□ -0.37
CDH3-206ENST00000567674 ATP9AO75110 1047 aa12.75□□□□□ -0.37
CDH3-206ENST00000567674 DEXIO95424 95 aa12.75□□□□□ -0.37
CDH3-206ENST00000567674 RSPH10BP0C881 870 aa12.75□□□□□ -0.37
CDH3-206ENST00000567674 ZNF286BP0CG31 522 aa12.75□□□□□ -0.37
CDH3-206ENST00000567674 PKN1Q16512 942 aa12.75□□□□□ -0.37
CDH3-206ENST00000567674 UBE2SQ16763 222 aa12.75□□□□□ -0.37
CDH3-206ENST00000567674 TYW1BQ6NUM6 668 aa12.75□□□□□ -0.37
CDH3-206ENST00000567674 TRAF7Q6Q0C0 670 aa12.75□□□□□ -0.37
CDH3-206ENST00000567674 TCEANC2Q96MN5 208 aa12.75□□□□□ -0.37
CDH3-206ENST00000567674 GAS2L1Q99501 681 aaPredicted RBP12.75□□□□□ -0.37
CDH3-206ENST00000567674 GSTTP1A0A1W2PQM5 241 aa12.74□□□□□ -0.37
CDH3-206ENST00000567674 hCG_1642624A0A1W2PR95 340 aa12.74□□□□□ -0.37
CDH3-206ENST00000567674 CPLX1O14810 134 aa12.74□□□□□ -0.37
CDH3-206ENST00000567674 XBP1P17861 261 aa12.74□□□□□ -0.37
CDH3-206ENST00000567674 KCNJ6P48051 423 aa12.74□□□□□ -0.37
CDH3-206ENST00000567674 SSRP1Q08945 709 aaKnown RBP12.74□□□□□ -0.37
CDH3-206ENST00000567674 TOB2Q14106 344 aaPredicted RBP12.74□□□□□ -0.37
CDH3-206ENST00000567674 GPNMBQ14956 572 aa12.74□□□□□ -0.37
CDH3-206ENST00000567674 ZNF618Q5T7W0 954 aa12.74□□□□□ -0.37
CDH3-206ENST00000567674 MOXD1Q6UVY6 613 aa12.74□□□□□ -0.37
CDH3-206ENST00000567674 DEFB128Q7Z7B8 93 aa12.74□□□□□ -0.37
CDH3-206ENST00000567674 SMAP1Q8IYB5 467 aaPredicted RBP12.74□□□□□ -0.37
CDH3-206ENST00000567674 SNX27Q96L92 541 aa12.74□□□□□ -0.37
CDH3-206ENST00000567674 AGO4Q9HCK5 861 aaKnown RBP12.74□□□□□ -0.37
CDH3-206ENST00000567674 LMCD1Q9NZU5 365 aa12.74□□□□□ -0.37
CDH3-206ENST00000567674 TANC1Q9C0D5 1861 aa12.74□□□□□ -0.37
CDH3-206ENST00000567674 ZBBXA8MT70 800 aa12.73□□□□□ -0.37
CDH3-206ENST00000567674 NBNO60934 754 aa12.73□□□□□ -0.37
CDH3-206ENST00000567674 ZNF76P36508 570 aa12.73□□□□□ -0.37
CDH3-206ENST00000567674 STAT5BP51692 787 aa12.73□□□□□ -0.37
CDH3-206ENST00000567674 KRT76Q01546 638 aa12.73□□□□□ -0.37
CDH3-206ENST00000567674 PLEKHG4Q58EX7 1191 aa12.73□□□□□ -0.37
CDH3-206ENST00000567674 ZNF746Q6NUN9 644 aaPredicted RBP12.73□□□□□ -0.37
CDH3-206ENST00000567674 HERC6Q8IVU3 1022 aa12.73□□□□□ -0.37
CDH3-206ENST00000567674 DAGLBQ8NCG7 672 aa12.73□□□□□ -0.37
CDH3-206ENST00000567674 SEPT8Q92599 483 aa12.73□□□□□ -0.37
CDH3-206ENST00000567674 GLG1Q92896 1179 aa12.73□□□□□ -0.37
CDH3-206ENST00000567674 RAD9AQ99638 391 aa12.73□□□□□ -0.37
CDH3-206ENST00000567674 NAP1L4Q99733 375 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms