RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 PTPRSQ13332 1948 aa16.32■□□□□ 0.2
COMMD4-216ENST00000567023 PLEKHG4Q58EX7 1191 aa16.32■□□□□ 0.2
COMMD4-216ENST00000567023 RPAINQ86UA6 219 aa16.32■□□□□ 0.2
COMMD4-216ENST00000567023 CCDC136Q96JN2 1154 aa16.32■□□□□ 0.2
COMMD4-216ENST00000567023 RAD9AQ99638 391 aa16.32■□□□□ 0.2
COMMD4-216ENST00000567023 GLT8D2Q9H1C3 349 aa16.32■□□□□ 0.2
COMMD4-216ENST00000567023 SETD4Q9NVD3 440 aa16.32■□□□□ 0.2
COMMD4-216ENST00000567023 BARHL2Q9NY43 387 aa16.32■□□□□ 0.2
COMMD4-216ENST00000567023 KLF18A0A0U1RQI7 1052 aa16.31■□□□□ 0.2
COMMD4-216ENST00000567023 STXBP3O00186 592 aa16.31■□□□□ 0.2
COMMD4-216ENST00000567023 ARHGEF15O94989 841 aa16.31■□□□□ 0.2
COMMD4-216ENST00000567023 CDC27P30260 824 aa16.31■□□□□ 0.2
COMMD4-216ENST00000567023 CLK2P49760 499 aaKnown RBP16.31■□□□□ 0.2
COMMD4-216ENST00000567023 NAPAP54920 295 aa16.31■□□□□ 0.2
COMMD4-216ENST00000567023 TJAP1Q5JTD0 557 aa16.31■□□□□ 0.2
COMMD4-216ENST00000567023 UTP14CQ5TAP6 766 aaKnown RBP16.31■□□□□ 0.2
COMMD4-216ENST00000567023 ERICH6BQ5W0A0 696 aa16.31■□□□□ 0.2
COMMD4-216ENST00000567023 DBF4BQ8NFT6 615 aa16.31■□□□□ 0.2
COMMD4-216ENST00000567023 LMBR1Q8WVP7 490 aa16.31■□□□□ 0.2
COMMD4-216ENST00000567023 PPM1EQ8WY54 764 aa16.31■□□□□ 0.2
COMMD4-216ENST00000567023 MXRA8Q9BRK3 442 aa16.31■□□□□ 0.2
COMMD4-216ENST00000567023 KCNH7Q9NS40 1196 aa16.31■□□□□ 0.2
COMMD4-216ENST00000567023 ERAP1Q9NZ08 941 aa16.31■□□□□ 0.2
COMMD4-216ENST00000567023 CCDC196A0A1B0GTZ2 297 aa16.3■□□□□ 0.2
COMMD4-216ENST00000567023 SMCO2A6NFE2 343 aa16.3■□□□□ 0.2
COMMD4-216ENST00000567023 GOLGA8AA7E2F4 631 aa16.3■□□□□ 0.2
COMMD4-216ENST00000567023 GOLGA8BA8MQT2 603 aa16.3■□□□□ 0.2
COMMD4-216ENST00000567023 ADD1P35611 737 aaKnown RBP16.3■□□□□ 0.2
COMMD4-216ENST00000567023 SP4Q02446 784 aa16.3■□□□□ 0.2
COMMD4-216ENST00000567023 FAM26DQ5JW98 314 aa16.3■□□□□ 0.2
COMMD4-216ENST00000567023 TMCO2Q7Z6W1 182 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-216ENST00000567023 ZBED2Q9BTP6 218 aa16.3■□□□□ 0.2
COMMD4-216ENST00000567023 AGXT2Q9BYV1 514 aa16.3■□□□□ 0.2
COMMD4-216ENST00000567023 SMARCAD1Q9H4L7 1026 aa16.3■□□□□ 0.2
COMMD4-216ENST00000567023 PRDM6Q9NQX0 595 aa16.3■□□□□ 0.2
COMMD4-216ENST00000567023 THEGQ9P2T0 379 aa16.3■□□□□ 0.2
COMMD4-216ENST00000567023 SNX14Q9Y5W7 946 aa16.3■□□□□ 0.2
COMMD4-216ENST00000567023 MTCH2Q9Y6C9 303 aa16.3■□□□□ 0.2
COMMD4-216ENST00000567023 NID2Q14112 1375 aa16.29■□□□□ 0.2
COMMD4-216ENST00000567023 LCHNA4D1U4 455 aa16.29■□□□□ 0.2
COMMD4-216ENST00000567023 EPOPA6NHQ4 379 aa16.29■□□□□ 0.2
COMMD4-216ENST00000567023 RFXAPO00287 272 aa16.29■□□□□ 0.2
COMMD4-216ENST00000567023 EPB41L2O43491 1005 aaKnown RBP16.29■□□□□ 0.2
COMMD4-216ENST00000567023 ADCY7P51828 1080 aa16.29■□□□□ 0.2
COMMD4-216ENST00000567023 ARHGAP4P98171 946 aa16.29■□□□□ 0.2
COMMD4-216ENST00000567023 AP3B2Q13367 1082 aa16.29■□□□□ 0.2
COMMD4-216ENST00000567023 CCDC85BQ15834 202 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-216ENST00000567023 PFKFB3Q16875 520 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-216ENST00000567023 CEP55Q53EZ4 464 aa16.29■□□□□ 0.2
COMMD4-216ENST00000567023 TAF2Q6P1X5 1199 aa16.29■□□□□ 0.2
COMMD4-216ENST00000567023 CYP2W1Q8TAV3 490 aa16.29■□□□□ 0.2
COMMD4-216ENST00000567023 CERS4Q9HA82 394 aa16.29■□□□□ 0.2
COMMD4-216ENST00000567023 JPH1Q9HDC5 661 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-216ENST00000567023 NFASCO94856 1347 aa16.28■□□□□ 0.2
COMMD4-216ENST00000567023 MBLAC1A4D2B0 266 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-216ENST00000567023 MEIS1O00470 390 aa16.28■□□□□ 0.2
COMMD4-216ENST00000567023 GTPBP6O43824 516 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-216ENST00000567023 REC8O95072 547 aa16.28■□□□□ 0.2
COMMD4-216ENST00000567023 CPA1P15085 419 aa16.28■□□□□ 0.2
COMMD4-216ENST00000567023 SREBF1P36956 1147 aa16.28■□□□□ 0.2
COMMD4-216ENST00000567023 METAP2P50579 478 aaKnown RBP eCLIP16.28■□□□□ 0.2
COMMD4-216ENST00000567023 FGD1P98174 961 aa16.28■□□□□ 0.2
COMMD4-216ENST00000567023 BLOC1S2Q6QNY1 142 aa16.28■□□□□ 0.2
COMMD4-216ENST00000567023 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.28■□□□□ 0.2
COMMD4-216ENST00000567023 Q6ZUG5 572 aa16.28■□□□□ 0.2
COMMD4-216ENST00000567023 ARNTL2Q8WYA1 636 aa16.28■□□□□ 0.2
COMMD4-216ENST00000567023 SEPT8Q92599 483 aa16.28■□□□□ 0.2
COMMD4-216ENST00000567023 JAKMIP1Q96N16 626 aaKnown RBP16.28■□□□□ 0.2
COMMD4-216ENST00000567023 ASB2Q96Q27 587 aa16.28■□□□□ 0.2
COMMD4-216ENST00000567023 ANO3Q9BYT9 981 aa16.28■□□□□ 0.2
COMMD4-216ENST00000567023 SLC9A2Q9UBY0 812 aa16.28■□□□□ 0.2
COMMD4-216ENST00000567023 INSL6Q9Y581 213 aa16.28■□□□□ 0.2
COMMD4-216ENST00000567023 KAT6AQ92794 2004 aa16.28■□□□□ 0.2
COMMD4-216ENST00000567023 LPXNO60711 386 aa16.27■□□□□ 0.2
COMMD4-216ENST00000567023 AMHP03971 560 aa16.27■□□□□ 0.2
COMMD4-216ENST00000567023 EVCP57679 992 aa16.27■□□□□ 0.2
COMMD4-216ENST00000567023 MRPS5P82675 430 aaKnown RBP16.27■□□□□ 0.2
COMMD4-216ENST00000567023 HTRA4P83105 476 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-216ENST00000567023 APOBRQ0VD83 1088 aa16.27■□□□□ 0.2
COMMD4-216ENST00000567023 PPFIA1Q13136 1202 aa16.27■□□□□ 0.2
COMMD4-216ENST00000567023 MARCH8Q5T0T0 291 aa16.27■□□□□ 0.2
COMMD4-216ENST00000567023 NIPA1Q7RTP0 329 aa16.27■□□□□ 0.2
COMMD4-216ENST00000567023 CRYGNQ8WXF5 182 aa16.27■□□□□ 0.2
COMMD4-216ENST00000567023 APBB2Q92870 758 aa16.27■□□□□ 0.2
COMMD4-216ENST00000567023 GLG1Q92896 1179 aa16.27■□□□□ 0.2
COMMD4-216ENST00000567023 BRF1Q92994 677 aa16.27■□□□□ 0.2
COMMD4-216ENST00000567023 TOP1MTQ969P6 601 aa16.27■□□□□ 0.2
COMMD4-216ENST00000567023 PCYT2Q99447 389 aa16.27■□□□□ 0.2
COMMD4-216ENST00000567023 OSBPL7Q9BZF2 842 aa16.27■□□□□ 0.2
COMMD4-216ENST00000567023 ZMYND12Q9H0C1 365 aa16.27■□□□□ 0.2
COMMD4-216ENST00000567023 TSPYL2Q9H2G4 693 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-216ENST00000567023 AGO4Q9HCK5 861 aaKnown RBP16.27■□□□□ 0.2
COMMD4-216ENST00000567023 LMCD1Q9NZU5 365 aa16.27■□□□□ 0.2
COMMD4-216ENST00000567023 PRRC2BQ5JSZ5 2229 aaKnown RBP16.27■□□□□ 0.19
COMMD4-216ENST00000567023 MICAL3Q7RTP6 2002 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 TTC28Q96AY4 2481 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 ESYT2A0FGR8 921 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 ATG7O95352 703 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 CHRNA1P02708 482 aa16.26■□□□□ 0.19
COMMD4-216ENST00000567023 RPLP2P05387 115 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms