RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 SHHQ15465 462 aa15.24■□□□□ 0.03
CLK3-218ENST00000566926 GDF6Q6KF10 455 aaPredicted RBP15.24■□□□□ 0.03
CLK3-218ENST00000566926 PSRC1Q6PGN9 363 aaPredicted RBP15.24■□□□□ 0.03
CLK3-218ENST00000566926 PLA2G4DQ86XP0 818 aa15.24■□□□□ 0.03
CLK3-218ENST00000566926 BLIDQ8IZY5 108 aa15.24■□□□□ 0.03
CLK3-218ENST00000566926 DAGLBQ8NCG7 672 aa15.24■□□□□ 0.03
CLK3-218ENST00000566926 NSUN7Q8NE18 718 aaKnown RBP15.24■□□□□ 0.03
CLK3-218ENST00000566926 BCAS3Q9H6U6 928 aa15.24■□□□□ 0.03
CLK3-218ENST00000566926 JPH1Q9HDC5 661 aaPredicted RBP15.24■□□□□ 0.03
CLK3-218ENST00000566926 IL23AQ9NPF7 189 aa15.24■□□□□ 0.03
CLK3-218ENST00000566926 PCDH10Q9P2E7 1040 aa15.24■□□□□ 0.03
CLK3-218ENST00000566926 ORC3Q9UBD5 711 aaPredicted RBP15.24■□□□□ 0.03
CLK3-218ENST00000566926 SLC9A2Q9UBY0 812 aa15.24■□□□□ 0.03
CLK3-218ENST00000566926 PFKMP08237 780 aa15.23■□□□□ 0.03
CLK3-218ENST00000566926 RFC2P35250 354 aa15.23■□□□□ 0.03
CLK3-218ENST00000566926 TCF7P36402 384 aaPredicted RBP15.23■□□□□ 0.03
CLK3-218ENST00000566926 USP11P51784 963 aa15.23■□□□□ 0.03
CLK3-218ENST00000566926 CCL23P55773 120 aa15.23■□□□□ 0.03
CLK3-218ENST00000566926 UTP14CQ5TAP6 766 aaKnown RBP15.23■□□□□ 0.03
CLK3-218ENST00000566926 GPR153Q6NV75 609 aa15.23■□□□□ 0.03
CLK3-218ENST00000566926 CYP2W1Q8TAV3 490 aa15.23■□□□□ 0.03
CLK3-218ENST00000566926 CRYGNQ8WXF5 182 aa15.23■□□□□ 0.03
CLK3-218ENST00000566926 TNPO1Q92973 898 aaKnown RBP15.23■□□□□ 0.03
CLK3-218ENST00000566926 RNPC3Q96LT9 517 aaKnown RBP15.23■□□□□ 0.03
CLK3-218ENST00000566926 MTIF3Q9H2K0 278 aaKnown RBP15.23■□□□□ 0.03
CLK3-218ENST00000566926 AGO4Q9HCK5 861 aaKnown RBP15.23■□□□□ 0.03
CLK3-218ENST00000566926 PKD2L1Q9P0L9 805 aa15.23■□□□□ 0.03
CLK3-218ENST00000566926 TCEAL9Q9UHQ7 104 aa15.23■□□□□ 0.03
CLK3-218ENST00000566926 ATP6V1DQ9Y5K8 247 aa15.23■□□□□ 0.03
CLK3-218ENST00000566926 C17orf102A2RUQ5 167 aa15.22■□□□□ 0.03
CLK3-218ENST00000566926 STX6O43752 255 aa15.22■□□□□ 0.03
CLK3-218ENST00000566926 PARNO95453 639 aaKnown RBP15.22■□□□□ 0.03
CLK3-218ENST00000566926 ARP10275 920 aa15.22■□□□□ 0.03
CLK3-218ENST00000566926 CIITAP33076 1130 aa15.22■□□□□ 0.03
CLK3-218ENST00000566926 PTK7Q13308 1070 aa15.22■□□□□ 0.03
CLK3-218ENST00000566926 LARP1BQ659C4 914 aaKnown RBP15.22■□□□□ 0.03
CLK3-218ENST00000566926 RASGRP4Q8TDF6 673 aa15.22■□□□□ 0.03
CLK3-218ENST00000566926 PPP1R13LQ8WUF5 828 aa15.22■□□□□ 0.03
CLK3-218ENST00000566926 SMARCAD1Q9H4L7 1026 aa15.22■□□□□ 0.03
CLK3-218ENST00000566926 AZI2Q9H6S1 392 aa15.22■□□□□ 0.03
CLK3-218ENST00000566926 TBC1D22BQ9NU19 505 aa15.22■□□□□ 0.03
CLK3-218ENST00000566926 ERAP1Q9NZ08 941 aa15.22■□□□□ 0.03
CLK3-218ENST00000566926 UMODL1Q5DID0 1318 aa15.21■□□□□ 0.03
CLK3-218ENST00000566926 GSTTP1A0A1W2PQM5 241 aa15.21■□□□□ 0.03
CLK3-218ENST00000566926 FAM86B1E9PN63 330 aa15.21■□□□□ 0.03
CLK3-218ENST00000566926 BRD1O95696 1058 aa15.21■□□□□ 0.03
CLK3-218ENST00000566926 FGBP02675 491 aa15.21■□□□□ 0.03
CLK3-218ENST00000566926 FAM86B2P0C5J1 330 aa15.21■□□□□ 0.03
CLK3-218ENST00000566926 EPHB4P54760 987 aa15.21■□□□□ 0.03
CLK3-218ENST00000566926 RBL2Q08999 1139 aa15.21■□□□□ 0.03
CLK3-218ENST00000566926 C9orf50Q5SZB4 431 aa15.21■□□□□ 0.03
CLK3-218ENST00000566926 KRT25Q7Z3Z0 450 aa15.21■□□□□ 0.03
CLK3-218ENST00000566926 AFAP1L1Q8TED9 768 aa15.21■□□□□ 0.03
CLK3-218ENST00000566926 GLG1Q92896 1179 aa15.21■□□□□ 0.03
CLK3-218ENST00000566926 GBP4Q96PP9 640 aa15.21■□□□□ 0.03
CLK3-218ENST00000566926 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.21■□□□□ 0.032e-6■■■□□ 15
CLK3-218ENST00000566926 ZNF577Q9BSK1 485 aa15.21■□□□□ 0.03
CLK3-218ENST00000566926 PHF20Q9BVI0 1012 aa15.21■□□□□ 0.03
CLK3-218ENST00000566926 WNT8AQ9H1J5 351 aa15.21■□□□□ 0.03
CLK3-218ENST00000566926 BRMS1Q9HCU9 246 aa15.21■□□□□ 0.03
CLK3-218ENST00000566926 TET1Q8NFU7 2136 aa15.2■□□□□ 0.02
CLK3-218ENST00000566926 EMSYQ7Z589 1322 aa15.2■□□□□ 0.02
CLK3-218ENST00000566926 IGLV3-22A0A075B6J6 115 aa15.2■□□□□ 0.02
CLK3-218ENST00000566926 IPO5O00410 1097 aaKnown RBP15.2■□□□□ 0.02
CLK3-218ENST00000566926 CTDNEP1O95476 244 aa15.2■□□□□ 0.02
CLK3-218ENST00000566926 IQCF3P0C7M6 154 aa15.2■□□□□ 0.02
CLK3-218ENST00000566926 SMIM10L2AP0DMW4 78 aa15.2■□□□□ 0.02
CLK3-218ENST00000566926 SMIM10L2BP0DMW5 78 aa15.2■□□□□ 0.02
CLK3-218ENST00000566926 SYT1P21579 422 aa15.2■□□□□ 0.02
CLK3-218ENST00000566926 ACTR2P61160 394 aa15.2■□□□□ 0.02
CLK3-218ENST00000566926 TRIM29Q14134 588 aa15.2■□□□□ 0.02
CLK3-218ENST00000566926 NONOQ15233 471 aaKnown RBP eCLIP15.2■□□□□ 0.02
CLK3-218ENST00000566926 PRR16Q569H4 304 aa15.2■□□□□ 0.02
CLK3-218ENST00000566926 TMEM240Q5SV17 173 aa15.2■□□□□ 0.02
CLK3-218ENST00000566926 TBCKQ8TEA7 893 aa15.2■□□□□ 0.02
CLK3-218ENST00000566926 ATP6V0A1Q93050 837 aa15.2■□□□□ 0.02
CLK3-218ENST00000566926 AIFM3Q96NN9 605 aa15.2■□□□□ 0.02
CLK3-218ENST00000566926 RNPEPQ9H4A4 650 aa15.2■□□□□ 0.02
CLK3-218ENST00000566926 NRCAMQ92823 1304 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 CCDC194A0A1B0GVG4 234 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 M0R2N6 131 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 ADAMTS3O15072 1205 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 LGR5O75473 907 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 SLC34A2O95436 690 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 ACTN1P12814 892 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 SELPP16109 830 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 HOXC8P31273 242 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 SLC26A2P50443 739 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 SMAD3P84022 425 aaKnown RBP15.19■□□□□ 0.02
CLK3-218ENST00000566926 ITGB3BPQ13352 177 aaPredicted RBP15.19■□□□□ 0.02
CLK3-218ENST00000566926 MOXD1Q6UVY6 613 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 CLEC17AQ6ZS10 378 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 ZNF365Q70YC5 407 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 PLPPR4Q7Z2D5 763 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 TRIM50Q86XT4 487 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 SCLYQ96I15 445 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 NAP1L4Q99733 375 aaKnown RBP15.19■□□□□ 0.02
CLK3-218ENST00000566926 KCNJ14Q9UNX9 436 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 MYO9BQ13459 2157 aa15.19■□□□□ 0.02
CLK3-218ENST00000566926 EVPLQ92817 2033 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms