RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 AFF2P51816 1311 aa27.37■■□□□ 1.97
FANCA-221ENST00000566889 GOLGA6L10A0A0M3HER8 536 aa27.37■■□□□ 1.97
FANCA-221ENST00000566889 SMNDC1O75940 238 aaKnown RBP eCLIP27.37■■□□□ 1.971e-17■■■□□ 17.9
FANCA-221ENST00000566889 VEGFAP15692 232 aaPredicted RBP27.37■■□□□ 1.97
FANCA-221ENST00000566889 FLT3P36888 993 aa27.37■■□□□ 1.97
FANCA-221ENST00000566889 DHX9Q08211 1270 aaKnown RBP27.37■■□□□ 1.97
FANCA-221ENST00000566889 NBPF20Q3BBV1 942 aa27.37■■□□□ 1.97
FANCA-221ENST00000566889 TMED8Q6PL24 325 aaPredicted RBP27.37■■□□□ 1.97
FANCA-221ENST00000566889 GPIHBP1Q8IV16 184 aa27.37■■□□□ 1.97
FANCA-221ENST00000566889 NLRC4Q9NPP4 1024 aa27.37■■□□□ 1.97
FANCA-221ENST00000566889 ZNF330Q9Y3S2 320 aaPredicted RBP27.37■■□□□ 1.97
FANCA-221ENST00000566889 PCDH11XQ9BZA7 1347 aa27.37■■□□□ 1.97
FANCA-221ENST00000566889 PCDH11YQ9BZA8 1340 aa27.37■■□□□ 1.97
FANCA-221ENST00000566889 MYH7BA7E2Y1 1941 aa27.37■■□□□ 1.97
FANCA-221ENST00000566889 PPARDQ03181 441 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 ADCY2Q08462 1091 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 TXNRD1Q16881 649 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 UNC13DQ70J99 1090 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 TBC1D1Q86TI0 1168 aaPredicted RBP27.36■■□□□ 1.97
FANCA-221ENST00000566889 NSRP1Q9H0G5 558 aaKnown RBP27.36■■□□□ 1.97
FANCA-221ENST00000566889 CCDC134Q9H6E4 229 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 DAPK3O43293 454 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 PPFIA2O75334 1257 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 MMEP08473 750 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 AP1ARQ63HQ0 302 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 LRRC55Q6ZSA7 311 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 PROM2Q8N271 834 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 MDM1Q8TC05 714 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 AGAP11Q8TF27 550 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 TSG101Q99816 390 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 TANGO6Q9C0B7 1094 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 RIC8AQ9NPQ8 531 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 PCDHA6Q9UN73 950 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 PCDHA8Q9Y5H6 950 aa27.36■■□□□ 1.97
FANCA-221ENST00000566889 ANKRD33BA6NCL7 494 aa27.35■■□□□ 1.97
FANCA-221ENST00000566889 MIS18BP1Q6P0N0 1132 aa27.35■■□□□ 1.97
FANCA-221ENST00000566889 CNKSR1Q969H4 720 aa27.35■■□□□ 1.97
FANCA-221ENST00000566889 KIF9Q9HAQ2 790 aa27.35■■□□□ 1.97
FANCA-221ENST00000566889 A0A087X0T9 212 aa27.35■■□□□ 1.97
FANCA-221ENST00000566889 NOL4O94818 638 aa27.35■■□□□ 1.97
FANCA-221ENST00000566889 FAM228BP0C875 321 aa27.35■■□□□ 1.97
FANCA-221ENST00000566889 NQO1P15559 274 aaKnown RBP27.35■■□□□ 1.97
FANCA-221ENST00000566889 CHN1P15882 459 aa27.35■■□□□ 1.97
FANCA-221ENST00000566889 MMP13P45452 471 aa27.35■■□□□ 1.97
FANCA-221ENST00000566889 RASGRP4Q8TDF6 673 aa27.35■■□□□ 1.97
FANCA-221ENST00000566889 ATXN2LQ8WWM7 1075 aaKnown RBP27.35■■□□□ 1.97
FANCA-221ENST00000566889 PGM2Q96G03 612 aa27.35■■□□□ 1.97
FANCA-221ENST00000566889 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.35■■□□□ 1.97
FANCA-221ENST00000566889 AIPL1Q9NZN9 384 aa27.35■■□□□ 1.97
FANCA-221ENST00000566889 UTP11Q9Y3A2 253 aaKnown RBP27.35■■□□□ 1.97
FANCA-221ENST00000566889 NOC2LQ9Y3T9 749 aaKnown RBP27.35■■□□□ 1.97
FANCA-221ENST00000566889 KRIT1O00522 736 aa27.34■■□□□ 1.97
FANCA-221ENST00000566889 OR52Z1P0C646 297 aa27.34■■□□□ 1.97
FANCA-221ENST00000566889 INF2Q27J81 1249 aa27.34■■□□□ 1.97
FANCA-221ENST00000566889 DZIP3Q86Y13 1208 aaKnown RBP27.34■■□□□ 1.97
FANCA-221ENST00000566889 L3MBTL1Q9Y468 752 aa27.34■■□□□ 1.97
FANCA-221ENST00000566889 SMIM22K7EJ46 135 aa27.33■■□□□ 1.97
FANCA-221ENST00000566889 ZNF131P52739 623 aa27.33■■□□□ 1.97
FANCA-221ENST00000566889 SV2BQ7L1I2 683 aa27.33■■□□□ 1.97
FANCA-221ENST00000566889 RASGEF1CQ8N431 466 aa27.33■■□□□ 1.97
FANCA-221ENST00000566889 HPS3Q969F9 1004 aa27.33■■□□□ 1.97
FANCA-221ENST00000566889 CALML4Q96GE6 196 aa27.33■■□□□ 1.97
FANCA-221ENST00000566889 ZNF570Q96NI8 536 aa27.33■■□□□ 1.97
FANCA-221ENST00000566889 ANKRD27Q96NW4 1050 aa27.33■■□□□ 1.97
FANCA-221ENST00000566889 TXLNGYQ9BZA5 131 aa27.33■■□□□ 1.97
FANCA-221ENST00000566889 DDX47Q9H0S4 455 aaKnown RBP27.33■■□□□ 1.97
FANCA-221ENST00000566889 PANK4Q9NVE7 773 aa27.33■■□□□ 1.97
FANCA-221ENST00000566889 PNMA2Q9UL42 364 aa27.33■■□□□ 1.97
FANCA-221ENST00000566889 LUC7L3O95232 432 aaKnown RBP27.33■■□□□ 1.97
FANCA-221ENST00000566889 NUDT17P0C025 328 aa27.33■■□□□ 1.97
FANCA-221ENST00000566889 KLHL30Q0D2K2 578 aa27.33■■□□□ 1.97
FANCA-221ENST00000566889 SEPT2Q15019 361 aa27.33■■□□□ 1.97
FANCA-221ENST00000566889 AP1M1Q9BXS5 423 aa27.33■■□□□ 1.97
FANCA-221ENST00000566889 CROCCP2Q86T23 111 aa27.32■■□□□ 1.96
FANCA-221ENST00000566889 RNF217Q8TC41 542 aa27.32■■□□□ 1.96
FANCA-221ENST00000566889 SLC5A4Q9NY91 659 aa27.32■■□□□ 1.96
FANCA-221ENST00000566889 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.32■■□□□ 1.96
FANCA-221ENST00000566889 INHBEP58166 350 aa27.32■■□□□ 1.96
FANCA-221ENST00000566889 POLR2FP61218 127 aaKnown RBP27.32■■□□□ 1.96
FANCA-221ENST00000566889 ADGRA1Q86SQ6 560 aa27.32■■□□□ 1.96
FANCA-221ENST00000566889 LRRC57Q8N9N7 239 aa27.32■■□□□ 1.96
FANCA-221ENST00000566889 RIOK1Q9BRS2 568 aaKnown RBP27.32■■□□□ 1.96
FANCA-221ENST00000566889 LSM14BQ9BX40 385 aaKnown RBP27.32■■□□□ 1.96
FANCA-221ENST00000566889 PACSIN1Q9BY11 444 aa27.32■■□□□ 1.96
FANCA-221ENST00000566889 ADAMTSL3P82987 1691 aa27.31■■□□□ 1.96
FANCA-221ENST00000566889 CAND2O75155 1236 aa27.31■■□□□ 1.96
FANCA-221ENST00000566889 LRRC34Q8IZ02 419 aa27.31■■□□□ 1.96
FANCA-221ENST00000566889 GBP7Q8N8V2 638 aaPredicted RBP27.31■■□□□ 1.96
FANCA-221ENST00000566889 FMO2Q99518 471 aa27.31■■□□□ 1.96
FANCA-221ENST00000566889 STK17AQ9UEE5 414 aa27.31■■□□□ 1.96
FANCA-221ENST00000566889 ADAMTS1Q9UHI8 967 aa27.31■■□□□ 1.96
FANCA-221ENST00000566889 ATP8B3O60423 1300 aa27.31■■□□□ 1.96
FANCA-221ENST00000566889 CCDC169A6NNP5 214 aa27.31■■□□□ 1.96
FANCA-221ENST00000566889 ZBTB48P10074 688 aaPredicted RBP27.31■■□□□ 1.96
FANCA-221ENST00000566889 PSMD2Q13200 908 aa27.31■■□□□ 1.96
FANCA-221ENST00000566889 MKRN4PQ13434 485 aaPredicted RBP27.31■■□□□ 1.96
FANCA-221ENST00000566889 ASIC2Q16515 512 aa27.31■■□□□ 1.96
FANCA-221ENST00000566889 GPKOWQ92917 476 aaPredicted RBP eCLIP27.31■■□□□ 1.96
FANCA-221ENST00000566889 RAB17Q9H0T7 212 aa27.31■■□□□ 1.96
FANCA-221ENST00000566889 AMACRQ9UHK6 382 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms