RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 MYLIPQ8WY64 445 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 PHKBQ93100 1093 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 EMID1Q96A84 441 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 TIFAQ96CG3 184 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 GUCD1Q96NT3 240 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 INPP4AQ96PE3 977 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 UIMC1Q96RL1 719 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 SLC26A6Q9BXS9 759 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 ANO3Q9BYT9 981 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 FAM117AQ9C073 453 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 NCOA5Q9HCD5 579 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 TELO2Q9Y4R8 837 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 LAMA3Q16787 3333 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 CCDC196A0A1B0GTZ2 297 aa11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 SMCO2A6NFE2 343 aa11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 DDX39AO00148 427 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 STXBP3O00186 592 aa11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 STAM2O75886 525 aa11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 CTSHP09668 335 aa11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 ACTN1P12814 892 aa11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 MARK3P27448 753 aa11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 ZNF76P36508 570 aa11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 RABGGTBP53611 331 aa11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 MTMR1Q13613 665 aa11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 METTL7BQ6UX53 244 aa11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 NKX2-4Q9H2Z4 354 aa11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 TTYH1Q9H313 450 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 GTF2IRD1Q9UHL9 959 aa11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 MSRAQ9UJ68 235 aa11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 ZNF215Q9UL58 517 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 CYP46A1Q9Y6A2 500 aa11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 SLC4A7Q9Y6M7 1214 aa11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 EVPLQ92817 2033 aa11.57□□□□□ -0.56
GTF3C1-206ENST00000566779 COL4A4P53420 1690 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 C17orf102A2RUQ5 167 aa11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 SPATA31C2B4DYI2 1134 aa11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 IQCF3P0C7M6 154 aa11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 SMIM10L2AP0DMW4 78 aa11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 SMIM10L2BP0DMW5 78 aa11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 TGFB3P10600 412 aa11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 SCG2P13521 617 aa11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 FOSL2P15408 326 aa11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 ITGB5P18084 799 aa11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 PTGDRQ13258 359 aa11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 PPP1R18Q6NYC8 613 aa11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 LRRC8DQ7L1W4 858 aa11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 HERVK_113Q902F9 699 aa11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 DHX38Q92620 1227 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 KCNB2Q92953 911 aa11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 CDX2Q99626 313 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 GPR20Q99678 358 aa11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 PBX4Q9BYU1 374 aa11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 RIC8AQ9NPQ8 531 aa11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 FAM217BQ9NTX9 383 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-206ENST00000566779 H3BRB1 525 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 hCG_1984214I3L0E3 225 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 CPLX1O14810 134 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 ATP9AO75110 1047 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 PPFIA4O75335 1185 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 SELPP16109 830 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 ATP2A2P16615 1042 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 ICAM3P32942 547 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 TCF7P36402 384 aaPredicted RBP11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 THPOP40225 353 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 KCNJ6P48051 423 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 ARHGAP4P98171 946 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 FUT2Q10981 343 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 PFKFB3Q16875 520 aaPredicted RBP11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 XRRA1Q6P2D8 792 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 RUFY3Q7L099 469 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 PARP9Q8IXQ6 854 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 ZNF713Q8N859 430 aaPredicted RBP11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 SLC17A8Q8NDX2 589 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 CAGE1Q8TC20 777 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 GLG1Q92896 1179 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 ATP6V0A1Q93050 837 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 WNT8BQ93098 351 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 GPRASP2Q96D09 838 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 CDHR1Q96JP9 859 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 CTAGE1Q96RT6 745 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 C16orf70Q9BSU1 422 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 SEMA6BQ9H3T3 888 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 TUT1Q9H6E5 874 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 BARHL2Q9NY43 387 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 METRNQ9UJH8 293 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 STXBP5LQ9Y2K9 1186 aa11.55□□□□□ -0.56
GTF3C1-206ENST00000566779 HAS3O00219 553 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 DTNBO60941 627 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 PFKMP08237 780 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 CKBP12277 381 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 MYOGP15173 224 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 RFC2P35250 354 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 RCAN1P53805 252 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 IGBP1P78318 339 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 RAB30Q15771 203 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 FAM117BQ6P1L5 589 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 SESTD1Q86VW0 696 aa11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 REXO1Q8N1G1 1221 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 MAFAQ8NHW3 353 aaPredicted RBP11.54□□□□□ -0.56
GTF3C1-206ENST00000566779 CYP2W1Q8TAV3 490 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms