RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ASIC2Q16515 512 aa15.66■□□□□ 0.1
CDH1-209ENST00000566510 CFAP58Q5T655 872 aa15.66■□□□□ 0.1
CDH1-209ENST00000566510 FAM196AQ6ZSG2 479 aa15.66■□□□□ 0.1
CDH1-209ENST00000566510 DNAAF5Q86Y56 855 aa15.66■□□□□ 0.1
CDH1-209ENST00000566510 NGLY1Q96IV0 654 aa15.66■□□□□ 0.1
CDH1-209ENST00000566510 POLLQ9UGP5 575 aa15.66■□□□□ 0.1
CDH1-209ENST00000566510 COL24A1Q17RW2 1714 aa15.66■□□□□ 0.1
CDH1-209ENST00000566510 ZEB2O60315 1214 aa15.66■□□□□ 0.1
CDH1-209ENST00000566510 SLURP2P0DP57 97 aa15.66■□□□□ 0.1
CDH1-209ENST00000566510 ACTN1P12814 892 aa15.66■□□□□ 0.1
CDH1-209ENST00000566510 NOP2P46087 812 aaKnown RBP15.66■□□□□ 0.1
CDH1-209ENST00000566510 TTC31Q49AM3 519 aaPredicted RBP15.66■□□□□ 0.1
CDH1-209ENST00000566510 GLE1Q53GS7 698 aaKnown RBP15.66■□□□□ 0.1
CDH1-209ENST00000566510 PRR5LQ6MZQ0 368 aa15.66■□□□□ 0.1
CDH1-209ENST00000566510 SCFD1Q8WVM8 642 aa15.66■□□□□ 0.1
CDH1-209ENST00000566510 CEP63Q96MT8 703 aa15.66■□□□□ 0.1
CDH1-209ENST00000566510 KDM3AQ9Y4C1 1321 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 RBAK-RBAKDNI3L0D1 243 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 GNA14O95837 355 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 KCNH2Q12809 1159 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 NNTQ13423 1086 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 SEPT2Q15019 361 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 TRIM59Q8IWR1 403 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 PPM1EQ8WY54 764 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 TAF4BQ92750 862 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 SPAG5Q96R06 1193 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 SH3GL2Q99962 352 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 GOLPH3Q9H4A6 298 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 SERPINB13Q9UIV8 391 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 SAMM50Q9Y512 469 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 MYH4Q9Y623 1939 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 KCNK3O14649 394 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 ZBTB5O15062 677 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 CETN3O15182 167 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 NR2F2P24468 414 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 PAK2Q13177 524 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 PDCLQ13371 301 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 TRADDQ15628 312 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 GBP6Q6ZN66 633 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 TBC1D22AQ8WUA7 517 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 SYN2Q92777 582 aaPredicted RBP15.65■□□□□ 0.1
CDH1-209ENST00000566510 CAVIN3Q969G5 261 aa15.65■□□□□ 0.1
CDH1-209ENST00000566510 DDX4Q9NQI0 724 aaKnown RBP15.65■□□□□ 0.1
CDH1-209ENST00000566510 AHDC1Q5TGY3 1603 aaPredicted RBP15.64■□□□□ 0.09
CDH1-209ENST00000566510 POTEFA5A3E0 1075 aa15.64■□□□□ 0.09
CDH1-209ENST00000566510 MEIS1O00470 390 aa15.64■□□□□ 0.09
CDH1-209ENST00000566510 EIF3HO15372 352 aaKnown RBP eCLIP15.64■□□□□ 0.09
CDH1-209ENST00000566510 POTEIP0CG38 1075 aa15.64■□□□□ 0.09
CDH1-209ENST00000566510 NOVP48745 357 aa15.64■□□□□ 0.09
CDH1-209ENST00000566510 PPARDQ03181 441 aa15.64■□□□□ 0.09
CDH1-209ENST00000566510 POTEGQ6S5H5 508 aa15.64■□□□□ 0.09
CDH1-209ENST00000566510 POTEEQ6S8J3 1075 aa15.64■□□□□ 0.09
CDH1-209ENST00000566510 MICALL1Q8N3F8 863 aa15.64■□□□□ 0.09
CDH1-209ENST00000566510 FAM163AQ96GL9 167 aaPredicted RBP15.64■□□□□ 0.09
CDH1-209ENST00000566510 RNF14Q9UBS8 474 aa15.64■□□□□ 0.09
CDH1-209ENST00000566510 SNHG28P0DPA3 235 aa15.64■□□□□ 0.09
CDH1-209ENST00000566510 CLK2P49760 499 aaKnown RBP15.64■□□□□ 0.09
CDH1-209ENST00000566510 SCNN1DP51172 638 aa15.64■□□□□ 0.09
CDH1-209ENST00000566510 HLTFQ14527 1009 aaKnown RBP eCLIP15.64■□□□□ 0.09
CDH1-209ENST00000566510 KCTD19Q17RG1 926 aaPredicted RBP15.64■□□□□ 0.09
CDH1-209ENST00000566510 DCAF17Q5H9S7 520 aaPredicted RBP15.64■□□□□ 0.09
CDH1-209ENST00000566510 MEI1Q5TIA1 1274 aa15.64■□□□□ 0.09
CDH1-209ENST00000566510 TCERG1LQ5VWI1 586 aa15.64■□□□□ 0.09
CDH1-209ENST00000566510 C15orf52Q6ZUT6 534 aaKnown RBP15.64■□□□□ 0.09
CDH1-209ENST00000566510 PACS2Q86VP3 889 aa15.64■□□□□ 0.09
CDH1-209ENST00000566510 TBC1D16Q8TBP0 767 aa15.64■□□□□ 0.09
CDH1-209ENST00000566510 CENPHQ9H3R5 247 aa15.64■□□□□ 0.09
CDH1-209ENST00000566510 GAKO14976 1311 aa15.64■□□□□ 0.09
CDH1-209ENST00000566510 CYP11B2P19099 503 aa15.63■□□□□ 0.09
CDH1-209ENST00000566510 SLC9A1P19634 815 aa15.63■□□□□ 0.09
CDH1-209ENST00000566510 PTK2Q05397 1052 aa15.63■□□□□ 0.09
CDH1-209ENST00000566510 RBM17Q96I25 401 aaKnown RBP15.63■□□□□ 0.09
CDH1-209ENST00000566510 USP40Q9NVE5 1235 aa15.63■□□□□ 0.09
CDH1-209ENST00000566510 HDAC9Q9UKV0 1011 aa15.63■□□□□ 0.09
CDH1-209ENST00000566510 MED24O75448 989 aa15.63■□□□□ 0.09
CDH1-209ENST00000566510 GCFC2P16383 781 aaKnown RBP15.63■□□□□ 0.09
CDH1-209ENST00000566510 CASP5P51878 434 aa15.63■□□□□ 0.09
CDH1-209ENST00000566510 PABPC4Q13310 644 aaKnown RBP eCLIP15.63■□□□□ 0.09
CDH1-209ENST00000566510 PPP1R18Q6NYC8 613 aa15.63■□□□□ 0.09
CDH1-209ENST00000566510 PROCA1Q8NCQ7 364 aaPredicted RBP15.63■□□□□ 0.09
CDH1-209ENST00000566510 MXD3Q9BW11 206 aa15.63■□□□□ 0.09
CDH1-209ENST00000566510 KCTD10Q9H3F6 313 aa15.63■□□□□ 0.09
CDH1-209ENST00000566510 GDF3Q9NR23 364 aa15.63■□□□□ 0.09
CDH1-209ENST00000566510 PCDHA2Q9Y5H9 948 aa15.63■□□□□ 0.09
CDH1-209ENST00000566510 PCDHA1Q9Y5I3 950 aa15.63■□□□□ 0.09
CDH1-209ENST00000566510 GRID2IPA4D2P6 1211 aa15.62■□□□□ 0.09
CDH1-209ENST00000566510 GABPAQ06546 454 aa15.62■□□□□ 0.09
CDH1-209ENST00000566510 RPS6KA1Q15418 735 aa15.62■□□□□ 0.09
CDH1-209ENST00000566510 MAATS1Q7Z4T9 603 aa15.62■□□□□ 0.09
CDH1-209ENST00000566510 EFCAB13Q8IY85 973 aa15.62■□□□□ 0.09
CDH1-209ENST00000566510 CASKIN2Q8WXE0 1202 aa15.62■□□□□ 0.09
CDH1-209ENST00000566510 FAM169AQ9Y6X4 670 aa15.62■□□□□ 0.09
CDH1-209ENST00000566510 GRIN2DO15399 1336 aa15.62■□□□□ 0.09
CDH1-209ENST00000566510 FAM170AA1A519 330 aa15.62■□□□□ 0.09
CDH1-209ENST00000566510 TMCO5BA8MYB1 307 aa15.62■□□□□ 0.09
CDH1-209ENST00000566510 NDUFAB1O14561 156 aa15.62■□□□□ 0.09
CDH1-209ENST00000566510 CEP104O60308 925 aa15.62■□□□□ 0.09
CDH1-209ENST00000566510 EPB41P11171 864 aaKnown RBP15.62■□□□□ 0.09
CDH1-209ENST00000566510 TNFRSF8P28908 595 aa15.62■□□□□ 0.09
CDH1-209ENST00000566510 LIG3P49916 1009 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms