RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 TAP1Q03518 808 aa23.08■■□□□ 1.29
CLN6-207ENST00000566347 TYW1BQ6NUM6 668 aa23.08■■□□□ 1.29
CLN6-207ENST00000566347 SYMPKQ92797 1274 aaKnown RBP23.08■■□□□ 1.29
CLN6-207ENST00000566347 JAKMIP1Q96N16 626 aaKnown RBP23.08■■□□□ 1.29
CLN6-207ENST00000566347 FAM217BQ9NTX9 383 aaPredicted RBP23.08■■□□□ 1.29
CLN6-207ENST00000566347 VCANP13611 3396 aa23.07■■□□□ 1.28
CLN6-207ENST00000566347 REC8O95072 547 aa23.07■■□□□ 1.28
CLN6-207ENST00000566347 CDC27P30260 824 aa23.07■■□□□ 1.28
CLN6-207ENST00000566347 METAP2P50579 478 aaKnown RBP eCLIP23.07■■□□□ 1.28
CLN6-207ENST00000566347 ADAM17P78536 824 aa23.07■■□□□ 1.28
CLN6-207ENST00000566347 ARHGAP4P98171 946 aa23.07■■□□□ 1.28
CLN6-207ENST00000566347 TCTN1Q2MV58 587 aa23.07■■□□□ 1.28
CLN6-207ENST00000566347 BLOC1S2Q6QNY1 142 aa23.07■■□□□ 1.28
CLN6-207ENST00000566347 LMBR1Q8WVP7 490 aa23.07■■□□□ 1.28
CLN6-207ENST00000566347 MXRA8Q9BRK3 442 aa23.07■■□□□ 1.28
CLN6-207ENST00000566347 ERAP1Q9NZ08 941 aa23.07■■□□□ 1.28
CLN6-207ENST00000566347 GSTTP1A0A1W2PQM5 241 aa23.06■■□□□ 1.28
CLN6-207ENST00000566347 SMCO2A6NFE2 343 aa23.06■■□□□ 1.28
CLN6-207ENST00000566347 GTPBP6O43824 516 aaPredicted RBP23.06■■□□□ 1.28
CLN6-207ENST00000566347 GJB5O95377 273 aa23.06■■□□□ 1.28
CLN6-207ENST00000566347 POU3F3P20264 500 aaPredicted RBP23.06■■□□□ 1.28
CLN6-207ENST00000566347 AP3B2Q13367 1082 aa23.06■■□□□ 1.28
CLN6-207ENST00000566347 CCDC85BQ15834 202 aaPredicted RBP23.06■■□□□ 1.28
CLN6-207ENST00000566347 PLEKHG4Q58EX7 1191 aa23.06■■□□□ 1.28
CLN6-207ENST00000566347 Q6ZUG5 572 aa23.06■■□□□ 1.28
CLN6-207ENST00000566347 DBF4BQ8NFT6 615 aa23.06■■□□□ 1.28
CLN6-207ENST00000566347 RAD9AQ99638 391 aa23.06■■□□□ 1.28
CLN6-207ENST00000566347 ANO3Q9BYT9 981 aa23.06■■□□□ 1.28
CLN6-207ENST00000566347 SMARCAD1Q9H4L7 1026 aa23.06■■□□□ 1.28
CLN6-207ENST00000566347 CERS4Q9HA82 394 aa23.06■■□□□ 1.28
CLN6-207ENST00000566347 JPH1Q9HDC5 661 aaPredicted RBP23.06■■□□□ 1.28
CLN6-207ENST00000566347 KCNH7Q9NS40 1196 aa23.06■■□□□ 1.28
CLN6-207ENST00000566347 PKD2L1Q9P0L9 805 aa23.06■■□□□ 1.28
CLN6-207ENST00000566347 SNX14Q9Y5W7 946 aa23.06■■□□□ 1.28
CLN6-207ENST00000566347 CPA1P15085 419 aa23.05■■□□□ 1.28
CLN6-207ENST00000566347 APOBRQ0VD83 1088 aa23.05■■□□□ 1.28
CLN6-207ENST00000566347 TJAP1Q5JTD0 557 aa23.05■■□□□ 1.28
CLN6-207ENST00000566347 FBXL16Q8N461 479 aa23.05■■□□□ 1.28
CLN6-207ENST00000566347 ATXN2LQ8WWM7 1075 aaKnown RBP23.05■■□□□ 1.28
CLN6-207ENST00000566347 ARNTL2Q8WYA1 636 aa23.05■■□□□ 1.28
CLN6-207ENST00000566347 SEPT8Q92599 483 aa23.05■■□□□ 1.28
CLN6-207ENST00000566347 GLG1Q92896 1179 aa23.05■■□□□ 1.28
CLN6-207ENST00000566347 BRF1Q92994 677 aa23.05■■□□□ 1.28
CLN6-207ENST00000566347 TSPYL2Q9H2G4 693 aaPredicted RBP23.05■■□□□ 1.28
CLN6-207ENST00000566347 THEGQ9P2T0 379 aa23.05■■□□□ 1.28
CLN6-207ENST00000566347 MICAL3Q7RTP6 2002 aa23.04■■□□□ 1.28
CLN6-207ENST00000566347 ARHGEF15O94989 841 aa23.04■■□□□ 1.28
CLN6-207ENST00000566347 AMHP03971 560 aa23.04■■□□□ 1.28
CLN6-207ENST00000566347 CTSHP09668 335 aa23.04■■□□□ 1.28
CLN6-207ENST00000566347 PSMA5P28066 241 aa23.04■■□□□ 1.28
CLN6-207ENST00000566347 ADD1P35611 737 aaKnown RBP23.04■■□□□ 1.28
CLN6-207ENST00000566347 PPFIA1Q13136 1202 aa23.04■■□□□ 1.28
CLN6-207ENST00000566347 PFKFB3Q16875 520 aaPredicted RBP23.04■■□□□ 1.28
CLN6-207ENST00000566347 CEP55Q53EZ4 464 aa23.04■■□□□ 1.28
CLN6-207ENST00000566347 TAF2Q6P1X5 1199 aa23.04■■□□□ 1.28
CLN6-207ENST00000566347 TMCO2Q7Z6W1 182 aaPredicted RBP23.04■■□□□ 1.28
CLN6-207ENST00000566347 SDF4Q9BRK5 362 aa23.04■■□□□ 1.28
CLN6-207ENST00000566347 PRDM6Q9NQX0 595 aa23.04■■□□□ 1.28
CLN6-207ENST00000566347 SLC9A2Q9UBY0 812 aa23.04■■□□□ 1.28
CLN6-207ENST00000566347 NFASCO94856 1347 aa23.04■■□□□ 1.28
CLN6-207ENST00000566347 NID2Q14112 1375 aa23.03■■□□□ 1.28
CLN6-207ENST00000566347 SCG2P13521 617 aa23.03■■□□□ 1.28
CLN6-207ENST00000566347 SREBF1P36956 1147 aa23.03■■□□□ 1.28
CLN6-207ENST00000566347 CLK2P49760 499 aaKnown RBP23.03■■□□□ 1.28
CLN6-207ENST00000566347 MKRN4PQ13434 485 aaPredicted RBP23.03■■□□□ 1.28
CLN6-207ENST00000566347 FAM26DQ5JW98 314 aa23.03■■□□□ 1.28
CLN6-207ENST00000566347 RPAINQ86UA6 219 aa23.03■■□□□ 1.28
CLN6-207ENST00000566347 MICALL1Q8N3F8 863 aa23.03■■□□□ 1.28
CLN6-207ENST00000566347 CCDC12Q8WUD4 166 aaPredicted RBP23.03■■□□□ 1.28
CLN6-207ENST00000566347 PGBD1Q96JS3 809 aa23.03■■□□□ 1.28
CLN6-207ENST00000566347 TTC28Q96AY4 2481 aa23.03■■□□□ 1.28
CLN6-207ENST00000566347 LCHNA4D1U4 455 aa23.02■■□□□ 1.28
CLN6-207ENST00000566347 EPOPA6NHQ4 379 aa23.02■■□□□ 1.28
CLN6-207ENST00000566347 RFXAPO00287 272 aa23.02■■□□□ 1.28
CLN6-207ENST00000566347 EPB41L2O43491 1005 aaKnown RBP23.02■■□□□ 1.28
CLN6-207ENST00000566347 RPS6KB1P23443 525 aa23.02■■□□□ 1.28
CLN6-207ENST00000566347 MARK3P27448 753 aa23.02■■□□□ 1.28
CLN6-207ENST00000566347 GRIK4Q16099 956 aa23.02■■□□□ 1.28
CLN6-207ENST00000566347 MCTP2Q6DN12 878 aa23.02■■□□□ 1.28
CLN6-207ENST00000566347 RSPH3Q86UC2 560 aa23.02■■□□□ 1.28
CLN6-207ENST00000566347 CYP2W1Q8TAV3 490 aa23.02■■□□□ 1.28
CLN6-207ENST00000566347 APBB2Q92870 758 aa23.02■■□□□ 1.28
CLN6-207ENST00000566347 TNPO1Q92973 898 aaKnown RBP23.02■■□□□ 1.28
CLN6-207ENST00000566347 AZI2Q9H6S1 392 aa23.02■■□□□ 1.28
CLN6-207ENST00000566347 INSL6Q9Y581 213 aa23.02■■□□□ 1.28
CLN6-207ENST00000566347 MTCH2Q9Y6C9 303 aa23.02■■□□□ 1.28
CLN6-207ENST00000566347 PRRC2BQ5JSZ5 2229 aaKnown RBP23.02■■□□□ 1.28
CLN6-207ENST00000566347 ESYT2A0FGR8 921 aa23.01■■□□□ 1.27
CLN6-207ENST00000566347 MEIS1O00470 390 aa23.01■■□□□ 1.27
CLN6-207ENST00000566347 ZNF76P36508 570 aa23.01■■□□□ 1.27
CLN6-207ENST00000566347 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.01■■□□□ 1.27
CLN6-207ENST00000566347 NIPA1Q7RTP0 329 aa23.01■■□□□ 1.27
CLN6-207ENST00000566347 AGXT2Q9BYV1 514 aa23.01■■□□□ 1.27
CLN6-207ENST00000566347 AGO4Q9HCK5 861 aaKnown RBP23.01■■□□□ 1.27
CLN6-207ENST00000566347 TMEM260Q9NX78 707 aa23.01■■□□□ 1.27
CLN6-207ENST00000566347 TUBE1Q9UJT0 475 aa23.01■■□□□ 1.27
CLN6-207ENST00000566347 MBLAC1A4D2B0 266 aaPredicted RBP23■■□□□ 1.27
CLN6-207ENST00000566347 RRN3P2A6NIE6 340 aa23■■□□□ 1.27
CLN6-207ENST00000566347 PRPF3O43395 683 aaKnown RBP23■■□□□ 1.27
CLN6-207ENST00000566347 RPLP2P05387 115 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms