RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 KAT6AQ92794 2004 aa16.66■□□□□ 0.26
SPG7-213ENST00000566221 AK8Q96MA6 479 aa16.66■□□□□ 0.26
SPG7-213ENST00000566221 SPATA33Q96N06 139 aa16.66■□□□□ 0.26
SPG7-213ENST00000566221 UNC45AQ9H3U1 944 aa16.66■□□□□ 0.26
SPG7-213ENST00000566221 DDX20Q9UHI6 824 aaKnown RBP16.66■□□□□ 0.26
SPG7-213ENST00000566221 POTEMA6NI47 508 aa16.65■□□□□ 0.26
SPG7-213ENST00000566221 GOLGA6L22H0YM25 854 aa16.65■□□□□ 0.26
SPG7-213ENST00000566221 NOP56O00567 594 aaKnown RBP16.65■□□□□ 0.26
SPG7-213ENST00000566221 CHMP2AO43633 222 aa16.65■□□□□ 0.26
SPG7-213ENST00000566221 SORBS3O60504 671 aa16.65■□□□□ 0.26
SPG7-213ENST00000566221 SP4Q02446 784 aa16.65■□□□□ 0.26
SPG7-213ENST00000566221 IL17AQ16552 155 aa16.65■□□□□ 0.26
SPG7-213ENST00000566221 NCAPH2Q6IBW4 605 aa16.65■□□□□ 0.26
SPG7-213ENST00000566221 MIER3Q7Z3K6 550 aa16.65■□□□□ 0.26
SPG7-213ENST00000566221 TMEM87AQ8NBN3 555 aa16.65■□□□□ 0.26
SPG7-213ENST00000566221 PPTC7Q8NI37 304 aa16.65■□□□□ 0.26
SPG7-213ENST00000566221 LENG1Q96BZ8 264 aaPredicted RBP16.65■□□□□ 0.26
SPG7-213ENST00000566221 ARMC5Q96C12 935 aa16.65■□□□□ 0.26
SPG7-213ENST00000566221 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.65■□□□□ 0.26
SPG7-213ENST00000566221 AP5M1Q9H0R1 490 aa16.65■□□□□ 0.26
SPG7-213ENST00000566221 BCAS3Q9H6U6 928 aa16.65■□□□□ 0.26
SPG7-213ENST00000566221 LRWD1Q9UFC0 647 aa16.65■□□□□ 0.26
SPG7-213ENST00000566221 STK24Q9Y6E0 443 aa16.65■□□□□ 0.26
SPG7-213ENST00000566221 CCNE2O96020 404 aa16.64■□□□□ 0.25
SPG7-213ENST00000566221 ACTR2P61160 394 aa16.64■□□□□ 0.25
SPG7-213ENST00000566221 ZNF579Q8NAF0 562 aaKnown RBP16.64■□□□□ 0.25
SPG7-213ENST00000566221 ERMNQ8TAM6 284 aa16.64■□□□□ 0.25
SPG7-213ENST00000566221 ZNF333Q96JL9 665 aa16.64■□□□□ 0.25
SPG7-213ENST00000566221 CLIC6Q96NY7 704 aa16.64■□□□□ 0.25
SPG7-213ENST00000566221 CSRNP2Q9H175 543 aa16.64■□□□□ 0.25
SPG7-213ENST00000566221 UNC93B1Q9H1C4 597 aa16.64■□□□□ 0.25
SPG7-213ENST00000566221 UPF3AQ9H1J1 476 aaKnown RBP16.64■□□□□ 0.25
SPG7-213ENST00000566221 SPC25Q9HBM1 224 aa16.64■□□□□ 0.25
SPG7-213ENST00000566221 DISC1Q9NRI5 854 aa16.64■□□□□ 0.25
SPG7-213ENST00000566221 PCDHA7Q9UN72 937 aa16.64■□□□□ 0.25
SPG7-213ENST00000566221 SYNRGQ9UMZ2 1314 aa16.64■□□□□ 0.25
SPG7-213ENST00000566221 DDX11L8A8MPP1 907 aa16.63■□□□□ 0.25
SPG7-213ENST00000566221 DYNC1LI2O43237 492 aaPredicted RBP16.63■□□□□ 0.25
SPG7-213ENST00000566221 CCL5P13501 91 aa16.63■□□□□ 0.25
SPG7-213ENST00000566221 PTGS1P23219 599 aa16.63■□□□□ 0.25
SPG7-213ENST00000566221 CPT1AP50416 773 aa16.63■□□□□ 0.25
SPG7-213ENST00000566221 GJA9P57773 515 aa16.63■□□□□ 0.25
SPG7-213ENST00000566221 GRIN1Q05586 938 aa16.63■□□□□ 0.25
SPG7-213ENST00000566221 HSDL1Q3SXM5 330 aa16.63■□□□□ 0.25
SPG7-213ENST00000566221 BRDTQ58F21 947 aaPredicted RBP16.63■□□□□ 0.25
SPG7-213ENST00000566221 AXDND1Q5T1B0 1012 aaPredicted RBP16.63■□□□□ 0.25
SPG7-213ENST00000566221 HAUS3Q68CZ6 603 aa16.63■□□□□ 0.25
SPG7-213ENST00000566221 MIS18BP1Q6P0N0 1132 aa16.63■□□□□ 0.25
SPG7-213ENST00000566221 NEK9Q8TD19 979 aa16.63■□□□□ 0.25
SPG7-213ENST00000566221 SEPT1Q8WYJ6 367 aa16.63■□□□□ 0.25
SPG7-213ENST00000566221 GPR20Q99678 358 aa16.63■□□□□ 0.25
SPG7-213ENST00000566221 XPNPEP3Q9NQH7 507 aa16.63■□□□□ 0.25
SPG7-213ENST00000566221 PAK6Q9NQU5 681 aaPredicted RBP16.63■□□□□ 0.25
SPG7-213ENST00000566221 SAMM50Q9Y512 469 aa16.63■□□□□ 0.25
SPG7-213ENST00000566221 PCDHA10Q9Y5I2 948 aa16.63■□□□□ 0.25
SPG7-213ENST00000566221 SCN10AQ9Y5Y9 1956 aa16.63■□□□□ 0.25
SPG7-213ENST00000566221 KIAA0100Q14667 2235 aaKnown RBP16.62■□□□□ 0.25
SPG7-213ENST00000566221 GOLGA6L4A6NEF3 574 aa16.62■□□□□ 0.25
SPG7-213ENST00000566221 EML1O00423 815 aa16.62■□□□□ 0.25
SPG7-213ENST00000566221 ATG7O95352 703 aa16.62■□□□□ 0.25
SPG7-213ENST00000566221 PSAPP07602 524 aa16.62■□□□□ 0.25
SPG7-213ENST00000566221 MMP3P08254 477 aa16.62■□□□□ 0.25
SPG7-213ENST00000566221 SUPT20HL2P0C7V6 817 aa16.62■□□□□ 0.25
SPG7-213ENST00000566221 HOXD8P13378 290 aaPredicted RBP16.62■□□□□ 0.25
SPG7-213ENST00000566221 TCF7P36402 384 aaPredicted RBP16.62■□□□□ 0.25
SPG7-213ENST00000566221 TXLNAP40222 546 aa16.62■□□□□ 0.25
SPG7-213ENST00000566221 NKX3-2P78367 333 aa16.62■□□□□ 0.25
SPG7-213ENST00000566221 EPHA7Q15375 998 aa16.62■□□□□ 0.25
SPG7-213ENST00000566221 ADALQ6DHV7 355 aa16.62■□□□□ 0.25
SPG7-213ENST00000566221 ABHD15Q6UXT9 468 aa16.62■□□□□ 0.25
SPG7-213ENST00000566221 AFG1LQ8WV93 481 aa16.62■□□□□ 0.25
SPG7-213ENST00000566221 EMSYQ7Z589 1322 aa16.62■□□□□ 0.25
SPG7-213ENST00000566221 KDM3AQ9Y4C1 1321 aa16.62■□□□□ 0.25
SPG7-213ENST00000566221 A0A1W2PQ27 194 aa16.61■□□□□ 0.25
SPG7-213ENST00000566221 A0A1W2PQ64 194 aa16.61■□□□□ 0.25
SPG7-213ENST00000566221 A0A1W2PQD8 194 aa16.61■□□□□ 0.25
SPG7-213ENST00000566221 GSTTP1A0A1W2PQM5 241 aa16.61■□□□□ 0.25
SPG7-213ENST00000566221 A6NJR5 290 aa16.61■□□□□ 0.25
SPG7-213ENST00000566221 SLC26A4O43511 780 aa16.61■□□□□ 0.25
SPG7-213ENST00000566221 ADAMTS4O75173 837 aa16.61■□□□□ 0.25
SPG7-213ENST00000566221 C6orf222P0C671 652 aaPredicted RBP16.61■□□□□ 0.25
SPG7-213ENST00000566221 MTFR1Q15390 333 aa16.61■□□□□ 0.25
SPG7-213ENST00000566221 FSCN1Q16658 493 aaKnown RBP16.61■□□□□ 0.25
SPG7-213ENST00000566221 DGKDQ16760 1214 aa16.61■□□□□ 0.25
SPG7-213ENST00000566221 KRT79Q5XKE5 535 aa16.61■□□□□ 0.25
SPG7-213ENST00000566221 SNX29Q8TEQ0 813 aa16.61■□□□□ 0.25
SPG7-213ENST00000566221 SYMPKQ92797 1274 aaKnown RBP16.61■□□□□ 0.25
SPG7-213ENST00000566221 EIF2AK1Q9BQI3 630 aaKnown RBP16.61■□□□□ 0.25
SPG7-213ENST00000566221 RNF208Q9H0X6 261 aa16.61■□□□□ 0.25
SPG7-213ENST00000566221 POTEFA5A3E0 1075 aa16.6■□□□□ 0.25
SPG7-213ENST00000566221 PP2D1A8MPX8 630 aa16.6■□□□□ 0.25
SPG7-213ENST00000566221 BACH1O14867 736 aa16.6■□□□□ 0.25
SPG7-213ENST00000566221 PGK1P00558 417 aa16.6■□□□□ 0.25
SPG7-213ENST00000566221 CST5P28325 142 aaPredicted RBP16.6■□□□□ 0.25
SPG7-213ENST00000566221 MCM4P33991 863 aa16.6■□□□□ 0.25
SPG7-213ENST00000566221 UBA7P41226 1012 aa16.6■□□□□ 0.25
SPG7-213ENST00000566221 SPECC1Q5M775 1068 aa16.6■□□□□ 0.25
SPG7-213ENST00000566221 FAM160B1Q5W0V3 765 aa16.6■□□□□ 0.25
SPG7-213ENST00000566221 RESP18Q5W5W9 173 aa16.6■□□□□ 0.25
SPG7-213ENST00000566221 LHX8Q68G74 356 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms