RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 POTEEQ6S8J3 1075 aa17.33■□□□□ 0.36
COMMD4-210ENST00000564587 SMYD4Q8IYR2 804 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-210ENST00000564587 GUF1Q8N442 669 aaKnown RBP17.33■□□□□ 0.36
COMMD4-210ENST00000564587 DNAJC19Q96DA6 116 aa17.33■□□□□ 0.36
COMMD4-210ENST00000564587 INPP4AQ96PE3 977 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-210ENST00000564587 UNC45AQ9H3U1 944 aa17.33■□□□□ 0.36
COMMD4-210ENST00000564587 ZNF408Q9H9D4 720 aa17.33■□□□□ 0.36
COMMD4-210ENST00000564587 PANK4Q9NVE7 773 aa17.33■□□□□ 0.36
COMMD4-210ENST00000564587 BTBD7Q9P203 1132 aa17.33■□□□□ 0.36
COMMD4-210ENST00000564587 GDAQ9Y2T3 454 aa17.33■□□□□ 0.36
COMMD4-210ENST00000564587 LOC102724159A0A0B4J2E5 919 aa17.32■□□□□ 0.36
COMMD4-210ENST00000564587 ESPNB1AK53 854 aa17.32■□□□□ 0.36
COMMD4-210ENST00000564587 DHX15O43143 795 aaKnown RBP17.32■□□□□ 0.36
COMMD4-210ENST00000564587 DKC1O60832 514 aaKnown RBP eCLIP17.32■□□□□ 0.36
COMMD4-210ENST00000564587 SLITRK3O94933 977 aa17.32■□□□□ 0.36
COMMD4-210ENST00000564587 FGFR1OPO95684 399 aaKnown RBP17.32■□□□□ 0.36
COMMD4-210ENST00000564587 P4HBP07237 508 aaKnown RBP17.32■□□□□ 0.36
COMMD4-210ENST00000564587 IDEP14735 1019 aa17.32■□□□□ 0.36
COMMD4-210ENST00000564587 CYP11B2P19099 503 aa17.32■□□□□ 0.36
COMMD4-210ENST00000564587 CCNE1P24864 410 aa17.32■□□□□ 0.36
COMMD4-210ENST00000564587 MSNP26038 577 aaKnown RBP17.32■□□□□ 0.36
COMMD4-210ENST00000564587 GSDMDP57764 484 aa17.32■□□□□ 0.36
COMMD4-210ENST00000564587 EHHADHQ08426 723 aa17.32■□□□□ 0.36
COMMD4-210ENST00000564587 PWP2Q15269 919 aaKnown RBP17.32■□□□□ 0.36
COMMD4-210ENST00000564587 FILIP1LQ4L180 1135 aa17.32■□□□□ 0.36
COMMD4-210ENST00000564587 CDKAL1Q5VV42 579 aa17.32■□□□□ 0.36
COMMD4-210ENST00000564587 DYMQ7RTS9 669 aa17.32■□□□□ 0.36
COMMD4-210ENST00000564587 TRMT44Q8IYL2 757 aaKnown RBP17.32■□□□□ 0.36
COMMD4-210ENST00000564587 SHCBP1Q8NEM2 672 aa17.32■□□□□ 0.36
COMMD4-210ENST00000564587 UIMC1Q96RL1 719 aa17.32■□□□□ 0.36
COMMD4-210ENST00000564587 SENP7Q9BQF6 1050 aa17.32■□□□□ 0.36
COMMD4-210ENST00000564587 XPO4Q9C0E2 1151 aaKnown RBP17.32■□□□□ 0.36
COMMD4-210ENST00000564587 MROH8Q9H579 483 aa17.32■□□□□ 0.36
COMMD4-210ENST00000564587 NFASCO94856 1347 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 FRMD3A2A2Y4 597 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 TESPA1A2RU30 521 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-210ENST00000564587 POTEB2H3BUK9 544 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 TRAF5O00463 557 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 CHMP2AO43633 222 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 EIF3JO75822 258 aaKnown RBP17.31■□□□□ 0.36
COMMD4-210ENST00000564587 LYPLA2O95372 231 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 POTEJP0CG39 1038 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 ZBTB48P10074 688 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-210ENST00000564587 STX17P56962 302 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 STXBP2Q15833 593 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 ZNF746Q6NUN9 644 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-210ENST00000564587 NCAPG2Q86XI2 1143 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 FAM114A1Q8IWE2 563 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 TPH2Q8IWU9 490 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 SPC24Q8NBT2 197 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 P2RX5Q93086 422 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 DYDC2Q96IM9 177 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 MED15Q96RN5 788 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 PAGR1Q9BTK6 254 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 MOV10L1Q9BXT6 1211 aaKnown RBP17.31■□□□□ 0.36
COMMD4-210ENST00000564587 THAP9Q9H5L6 903 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 ZSWIM4Q9H7M6 989 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 ZKSCAN5Q9Y2L8 839 aa17.31■□□□□ 0.36
COMMD4-210ENST00000564587 WDR64B1ANS9 1081 aa17.3■□□□□ 0.36
COMMD4-210ENST00000564587 CNMDO75829 334 aa17.3■□□□□ 0.36
COMMD4-210ENST00000564587 ATP1A3P13637 1013 aa17.3■□□□□ 0.36
COMMD4-210ENST00000564587 GAP43P17677 238 aa17.3■□□□□ 0.36
COMMD4-210ENST00000564587 ICAM3P32942 547 aa17.3■□□□□ 0.36
COMMD4-210ENST00000564587 GJA5P36382 358 aa17.3■□□□□ 0.36
COMMD4-210ENST00000564587 CCNA1P78396 465 aa17.3■□□□□ 0.36
COMMD4-210ENST00000564587 CYP4A11Q02928 519 aa17.3■□□□□ 0.36
COMMD4-210ENST00000564587 STK4Q13043 487 aa17.3■□□□□ 0.36
COMMD4-210ENST00000564587 COASYQ13057 564 aa17.3■□□□□ 0.36
COMMD4-210ENST00000564587 FAM26FQ5R3K3 315 aa17.3■□□□□ 0.36
COMMD4-210ENST00000564587 ANKRD23Q86SG2 305 aa17.3■□□□□ 0.36
COMMD4-210ENST00000564587 SMAP1Q8IYB5 467 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-210ENST00000564587 NMRK2Q9NPI5 230 aa17.3■□□□□ 0.36
COMMD4-210ENST00000564587 SAMSN1Q9NSI8 373 aaKnown RBP17.3■□□□□ 0.36
COMMD4-210ENST00000564587 RGL1Q9NZL6 768 aa17.3■□□□□ 0.36
COMMD4-210ENST00000564587 CELF2O95319 508 aaKnown RBP17.29■□□□□ 0.36
COMMD4-210ENST00000564587 EEF1GP26641 437 aaKnown RBP17.29■□□□□ 0.36
COMMD4-210ENST00000564587 GCLCP48506 637 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-210ENST00000564587 LRRC63Q05C16 580 aa17.29■□□□□ 0.36
COMMD4-210ENST00000564587 ITGB3BPQ13352 177 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-210ENST00000564587 CTTNQ14247 550 aaKnown RBP17.29■□□□□ 0.36
COMMD4-210ENST00000564587 FAM43AQ8N2R8 423 aa17.29■□□□□ 0.36
COMMD4-210ENST00000564587 TRIM47Q96LD4 638 aa17.29■□□□□ 0.36
COMMD4-210ENST00000564587 TSG101Q99816 390 aa17.29■□□□□ 0.36
COMMD4-210ENST00000564587 BHMT2Q9H2M3 363 aa17.29■□□□□ 0.36
COMMD4-210ENST00000564587 MAGEC2Q9UBF1 373 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-210ENST00000564587 RBPJLQ9UBG7 517 aa17.29■□□□□ 0.36
COMMD4-210ENST00000564587 DBR1Q9UK59 544 aaKnown RBP17.29■□□□□ 0.36
COMMD4-210ENST00000564587 COL4A3BPQ9Y5P4 624 aa17.29■□□□□ 0.36
COMMD4-210ENST00000564587 LRRC10BA6NIK2 292 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 SPATA31C2B4DYI2 1134 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 NRDCO43847 1150 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 TBCAO75347 108 aaKnown RBP17.28■□□□□ 0.36
COMMD4-210ENST00000564587 FCER1AP12319 257 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 ERCC3P19447 782 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 QARSP47897 775 aaKnown RBP17.28■□□□□ 0.36
COMMD4-210ENST00000564587 ALDH5A1P51649 535 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-210ENST00000564587 PSMC6P62333 389 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 GIT2Q14161 759 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 KCTD2Q14681 263 aa17.28■□□□□ 0.36
COMMD4-210ENST00000564587 HERC4Q5GLZ8 1057 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms