RNA–Protein interactions for RNA: ENST00000564022.1

SCAPER-210, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 3

Gene SCAPER, Length 574 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-210	ENST00000564022	NINJ1	Q92982	152 aa		6.29	□□□□□ -1.4
SCAPER-210	ENST00000564022	ZSWIM3	Q96MP5	696 aa		6.29	□□□□□ -1.4
SCAPER-210	ENST00000564022	SMURF1	Q9HCE7	757 aa		6.29	□□□□□ -1.4
SCAPER-210	ENST00000564022	MAGEC2	Q9UBF1	373 aa	Predicted RBP	6.29	□□□□□ -1.4
SCAPER-210	ENST00000564022	ATP23	Q9Y6H3	246 aa		6.29	□□□□□ -1.4
SCAPER-210	ENST00000564022	SCD	O00767	359 aa		6.28	□□□□□ -1.4
SCAPER-210	ENST00000564022	GLRX3	O76003	335 aa	Known RBP	6.28	□□□□□ -1.4
SCAPER-210	ENST00000564022	NPTXR	O95502	500 aa		6.28	□□□□□ -1.4
SCAPER-210	ENST00000564022	FAH	P16930	419 aa		6.28	□□□□□ -1.4
SCAPER-210	ENST00000564022	NEK4	P51957	841 aa		6.28	□□□□□ -1.4
SCAPER-210	ENST00000564022	EPHA5	P54756	1037 aa		6.28	□□□□□ -1.4
SCAPER-210	ENST00000564022	TCERG1L	Q5VWI1	586 aa		6.28	□□□□□ -1.4
SCAPER-210	ENST00000564022	CDCA2	Q69YH5	1023 aa	Predicted RBP	6.28	□□□□□ -1.4
SCAPER-210	ENST00000564022	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	6.28	□□□□□ -1.4
SCAPER-210	ENST00000564022	CILP2	Q8IUL8	1156 aa		6.28	□□□□□ -1.4
SCAPER-210	ENST00000564022	TMEM151B	Q8IW70	566 aa		6.28	□□□□□ -1.4
SCAPER-210	ENST00000564022	TTLL11	Q8NHH1	800 aa		6.28	□□□□□ -1.4
SCAPER-210	ENST00000564022	DACT3	Q96B18	629 aa	Predicted RBP	6.28	□□□□□ -1.4
SCAPER-210	ENST00000564022	WNK4	Q96J92	1243 aa		6.28	□□□□□ -1.4
SCAPER-210	ENST00000564022	C11orf84	Q9BUA3	381 aa	Predicted RBP	6.28	□□□□□ -1.4
SCAPER-210	ENST00000564022	SLC12A8	A0AV02	714 aa		6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	PRAMEF25	A6NGN4	478 aa		6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	FAM90A27P	A6NNH2	459 aa		6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	ACOT7	O00154	380 aa		6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	SMARCA5	O60264	1052 aa	Predicted RBP	6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	KPNA6	O60684	536 aa		6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	PTPN1	P18031	435 aa	Known RBP	6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	GYS2	P54840	703 aa		6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	ITGA1	P56199	1179 aa		6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	PLEKHG4	Q58EX7	1191 aa		6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	DALRD3	Q5D0E6	543 aa	Known RBP	6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	FIGN	Q5HY92	759 aa		6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	PHF19	Q5T6S3	580 aa		6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	LRRTM3	Q86VH5	581 aa		6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	ADGRG2	Q8IZP9	1017 aa		6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	PCDH18	Q9HCL0	1135 aa		6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	CABP5	Q9NP86	173 aa		6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	CROT	Q9UKG9	612 aa		6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022	PLAA	Q9Y263	795 aa		6.27	□□□□□ -1.41
SCAPER-210	ENST00000564022		A0A1B0GTL3	188 aa		6.26	□□□□□ -1.41
SCAPER-210	ENST00000564022	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	6.26	□□□□□ -1.41
SCAPER-210	ENST00000564022	CLSTN1	O94985	981 aa		6.26	□□□□□ -1.41
SCAPER-210	ENST00000564022	ZSCAN22	P10073	491 aa	Predicted RBP	6.26	□□□□□ -1.41
SCAPER-210	ENST00000564022	HSD3B2	P26439	372 aa		6.26	□□□□□ -1.41
SCAPER-210	ENST00000564022	TAF7L	Q5H9L4	462 aa		6.26	□□□□□ -1.41
SCAPER-210	ENST00000564022	VASN	Q6EMK4	673 aa		6.26	□□□□□ -1.41
SCAPER-210	ENST00000564022	FSTL4	Q6MZW2	842 aa		6.26	□□□□□ -1.41
SCAPER-210	ENST00000564022	HHIPL2	Q6UWX4	724 aa		6.26	□□□□□ -1.41
SCAPER-210	ENST00000564022	C1QL4	Q86Z23	238 aa		6.26	□□□□□ -1.41
SCAPER-210	ENST00000564022	KY	Q8NBH2	561 aa		6.26	□□□□□ -1.41
SCAPER-210	ENST00000564022	ZNF526	Q8TF50	670 aa	Predicted RBP	6.26	□□□□□ -1.41
SCAPER-210	ENST00000564022	MFSD3	Q96ES6	412 aa		6.26	□□□□□ -1.41
SCAPER-210	ENST00000564022	SLK	Q9H2G2	1235 aa	Predicted RBP	6.26	□□□□□ -1.41
SCAPER-210	ENST00000564022	INTS7	Q9NVH2	962 aa	Known RBP	6.26	□□□□□ -1.41
SCAPER-210	ENST00000564022	WASF3	Q9UPY6	502 aa		6.26	□□□□□ -1.41
SCAPER-210	ENST00000564022	CLASP2	O75122	1294 aa	Known RBP	6.25	□□□□□ -1.41
SCAPER-210	ENST00000564022	HIP1R	O75146	1068 aa		6.25	□□□□□ -1.41
SCAPER-210	ENST00000564022	MYCLP1	P12525	358 aa	Predicted RBP	6.25	□□□□□ -1.41
SCAPER-210	ENST00000564022	HTRA3	P83110	453 aa		6.25	□□□□□ -1.41
SCAPER-210	ENST00000564022	IRF9	Q00978	393 aa		6.25	□□□□□ -1.41
SCAPER-210	ENST00000564022	ADAM9	Q13443	819 aa		6.25	□□□□□ -1.41
SCAPER-210	ENST00000564022	TMEM132B	Q14DG7	1078 aa		6.25	□□□□□ -1.41
SCAPER-210	ENST00000564022	PKN3	Q6P5Z2	889 aa		6.25	□□□□□ -1.41
SCAPER-210	ENST00000564022	LIPI	Q6XZB0	460 aa		6.25	□□□□□ -1.41
SCAPER-210	ENST00000564022	TTLL7	Q6ZT98	887 aa		6.25	□□□□□ -1.41
SCAPER-210	ENST00000564022	LINC00482	Q8N8I6	264 aa		6.25	□□□□□ -1.41
SCAPER-210	ENST00000564022	CHST14	Q8NCH0	376 aa		6.25	□□□□□ -1.41
SCAPER-210	ENST00000564022	CLIC6	Q96NY7	704 aa		6.25	□□□□□ -1.41
SCAPER-210	ENST00000564022	TARS2	Q9BW92	718 aa	Known RBP	6.25	□□□□□ -1.41
SCAPER-210	ENST00000564022	KRTAP9-2	Q9BYQ4	174 aa		6.25	□□□□□ -1.41
SCAPER-210	ENST00000564022	SLC39A2	Q9NP94	309 aa		6.25	□□□□□ -1.41
SCAPER-210	ENST00000564022	SPATA6	Q9NWH7	488 aa	Predicted RBP	6.25	□□□□□ -1.41
SCAPER-210	ENST00000564022	PTPDC1	A2A3K4	754 aa		6.24	□□□□□ -1.41
SCAPER-210	ENST00000564022	TRAF5	O00463	557 aa		6.24	□□□□□ -1.41
SCAPER-210	ENST00000564022	FFAR3	O14843	346 aa		6.24	□□□□□ -1.41
SCAPER-210	ENST00000564022	ENO2	P09104	434 aa	Predicted RBP	6.24	□□□□□ -1.41
SCAPER-210	ENST00000564022	GJA4	P35212	333 aa		6.24	□□□□□ -1.41
SCAPER-210	ENST00000564022	GLRB	P48167	497 aa		6.24	□□□□□ -1.41
SCAPER-210	ENST00000564022	PFKP	Q01813	784 aa		6.24	□□□□□ -1.41
SCAPER-210	ENST00000564022	SEC23A	Q15436	765 aa		6.24	□□□□□ -1.41
SCAPER-210	ENST00000564022	CD276	Q5ZPR3	534 aa		6.24	□□□□□ -1.41
SCAPER-210	ENST00000564022	SAPCD2	Q86UD0	394 aa		6.24	□□□□□ -1.41
SCAPER-210	ENST00000564022	PROSER1	Q86XN7	944 aa		6.24	□□□□□ -1.41
SCAPER-210	ENST00000564022	NOSTRIN	Q8IVI9	506 aa		6.24	□□□□□ -1.41
SCAPER-210	ENST00000564022	TTLL6	Q8N841	843 aa		6.24	□□□□□ -1.41
SCAPER-210	ENST00000564022	DDX1	Q92499	740 aa	Known RBP	6.24	□□□□□ -1.41
SCAPER-210	ENST00000564022	ARHGAP28	Q9P2N2	729 aa		6.24	□□□□□ -1.41
SCAPER-210	ENST00000564022	C4BPA	P04003	597 aa	Known RBP	6.23	□□□□□ -1.41
SCAPER-210	ENST00000564022	THBS2	P35442	1172 aa		6.23	□□□□□ -1.41
SCAPER-210	ENST00000564022	MECP2	P51608	486 aa	Known RBP	6.23	□□□□□ -1.41
SCAPER-210	ENST00000564022	JAG1	P78504	1218 aa		6.23	□□□□□ -1.41
SCAPER-210	ENST00000564022	DBP	Q10586	325 aa	Predicted RBP	6.23	□□□□□ -1.41
SCAPER-210	ENST00000564022	PCBP1	Q15365	356 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
SCAPER-210	ENST00000564022	ARHGAP44	Q17R89	818 aa		6.23	□□□□□ -1.41
SCAPER-210	ENST00000564022	SKIDA1	Q1XH10	827 aa		6.23	□□□□□ -1.41
SCAPER-210	ENST00000564022	VWA3B	Q502W6	1294 aa		6.23	□□□□□ -1.41
SCAPER-210	ENST00000564022	TM4SF20	Q53R12	229 aa		6.23	□□□□□ -1.41
SCAPER-210	ENST00000564022	KRTAP19-1	Q8IUB9	90 aa		6.23	□□□□□ -1.41
SCAPER-210	ENST00000564022	NXPE1	Q8N323	547 aa		6.23	□□□□□ -1.41
SCAPER-210	ENST00000564022	LINC01356	Q8N9X3	169 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms