RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 TRIM43BA6NCK2 446 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 KIF28PB7ZC32 967 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 NOP56O00567 594 aaKnown RBP10□□□□□ -0.81
NSMCE1-206ENST00000563900 KIAA0355O15063 1070 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 B4GALT4O60513 344 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 PQBP1O60828 265 aaKnown RBP10□□□□□ -0.81
NSMCE1-206ENST00000563900 PSMD10O75832 226 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 CLTBP09497 229 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 U2AF2P26368 475 aaKnown RBP eCLIP10□□□□□ -0.81
NSMCE1-206ENST00000563900 GJB2P29033 226 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 TCF7P36402 384 aaPredicted RBP10□□□□□ -0.81
NSMCE1-206ENST00000563900 PSEN2P49810 448 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 FOSBP53539 338 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 ACTR2P61160 394 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 GUCY1B3Q02153 619 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 TRIM29Q14134 588 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 ABHD15Q6UXT9 468 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 SH3RF1Q7Z6J0 888 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 TRIM50Q86XT4 487 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 TRIM43Q96BQ3 446 aaPredicted RBP10□□□□□ -0.81
NSMCE1-206ENST00000563900 INTS4Q96HW7 963 aaKnown RBP10□□□□□ -0.81
NSMCE1-206ENST00000563900 RIT2Q99578 217 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 SDF4Q9BRK5 362 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 ZNF577Q9BSK1 485 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 KATNAL1Q9BW62 490 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 KCNMB3Q9NPA1 279 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 TBC1D22BQ9NU19 505 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 SLC9A2Q9UBY0 812 aa10□□□□□ -0.81
NSMCE1-206ENST00000563900 ZMYND8Q9ULU4 1186 aaPredicted RBP10□□□□□ -0.81
NSMCE1-206ENST00000563900 ZSCAN21Q9Y5A6 473 aaPredicted RBP10□□□□□ -0.81
NSMCE1-206ENST00000563900 H3BRB1 525 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 TBX3O15119 743 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 ITGB8P26012 769 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 ADAM17P78536 824 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 KRT76Q01546 638 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 SP4Q02446 784 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 RBL2Q08999 1139 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 HIC1Q14526 733 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 MFSD10Q14728 455 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 SAFBQ15424 915 aaKnown RBP eCLIP9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 KIAA0753Q2KHM9 967 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 LETM2Q2VYF4 491 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 ZNF746Q6NUN9 644 aaPredicted RBP9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 AFAP1L1Q8TED9 768 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 HAS1Q92839 578 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 VTI1AQ96AJ9 217 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 NAP1L4Q99733 375 aaKnown RBP9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 GDF15Q99988 308 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 TRPV6Q9H1D0 765 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 TUT1Q9H6E5 874 aaKnown RBP9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 TRMT13Q9NUP7 481 aaKnown RBP9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 PCDH10Q9P2E7 1040 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 HDAC6Q9UBN7 1215 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 DDX25Q9UHL0 483 aaKnown RBP9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 GTF2IRD1Q9UHL9 959 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 KIF3AQ9Y496 699 aa9.99□□□□□ -0.81
NSMCE1-206ENST00000563900 LAMA3Q16787 3333 aa9.98□□□□□ -0.81
NSMCE1-206ENST00000563900 DCDC2CA8MYV0 355 aa9.98□□□□□ -0.81
NSMCE1-206ENST00000563900 SUPT20HL2P0C7V6 817 aa9.98□□□□□ -0.81
NSMCE1-206ENST00000563900 SYN1P17600 705 aa9.98□□□□□ -0.81
NSMCE1-206ENST00000563900 GDF6Q6KF10 455 aaPredicted RBP9.98□□□□□ -0.81
NSMCE1-206ENST00000563900 PLPPR4Q7Z2D5 763 aa9.98□□□□□ -0.81
NSMCE1-206ENST00000563900 NOSTRINQ8IVI9 506 aa9.98□□□□□ -0.81
NSMCE1-206ENST00000563900 CCDC60Q8IWA6 550 aaPredicted RBP9.98□□□□□ -0.81
NSMCE1-206ENST00000563900 SMAP1Q8IYB5 467 aaPredicted RBP9.98□□□□□ -0.81
NSMCE1-206ENST00000563900 PPP1R13LQ8WUF5 828 aa9.98□□□□□ -0.81
NSMCE1-206ENST00000563900 GJA10Q969M2 543 aa9.98□□□□□ -0.81
NSMCE1-206ENST00000563900 VAV3Q9UKW4 847 aa9.98□□□□□ -0.81
NSMCE1-206ENST00000563900 SMC3Q9UQE7 1217 aa9.98□□□□□ -0.81
NSMCE1-206ENST00000563900 IGSF9BQ9UPX0 1349 aa9.98□□□□□ -0.81
NSMCE1-206ENST00000563900 WDR81Q562E7 1941 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 DDX39AO00148 427 aaKnown RBP9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 TLR3O15455 904 aaKnown RBP9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 CCNT1O60563 726 aaKnown RBP9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 SMIM10L2AP0DMW4 78 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 SMIM10L2BP0DMW5 78 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 ATP4AP20648 1035 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 MAGEA10P43363 369 aaPredicted RBP9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 TRAPPC10P48553 1259 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 SLC26A2P50443 739 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 SPIRE1Q08AE8 756 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 ORC2Q13416 577 aaPredicted RBP9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 TRIM71Q2Q1W2 868 aaKnown RBP9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 UTP14CQ5TAP6 766 aaKnown RBP9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 LRCH2Q5VUJ6 765 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 RDM1Q8NG50 284 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 DHX38Q92620 1227 aaKnown RBP9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 FAM20AQ96MK3 541 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 MTMR9Q96QG7 549 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 UIMC1Q96RL1 719 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 NOC4LQ9BVI4 516 aaKnown RBP9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 TEKT3Q9BXF9 490 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 UNC45AQ9H3U1 944 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 RNPEPQ9H4A4 650 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 SMARCAD1Q9H4L7 1026 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 TMEM39AQ9NV64 488 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 ERAP1Q9NZ08 941 aa9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 ZNF215Q9UL58 517 aaPredicted RBP9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 MAFBQ9Y5Q3 323 aaPredicted RBP9.97□□□□□ -0.81
NSMCE1-206ENST00000563900 TRIP12Q14669 1992 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms