RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 SLC52A2Q9HAB3 445 aa5.65□□□□□ -1.5
GDE1-202ENST00000563645 DLL4Q9NR61 685 aa5.65□□□□□ -1.5
GDE1-202ENST00000563645 SFMBT1Q9UHJ3 866 aa5.65□□□□□ -1.5
GDE1-202ENST00000563645 CROTQ9UKG9 612 aa5.65□□□□□ -1.5
GDE1-202ENST00000563645 SRPK3Q9UPE1 567 aa5.65□□□□□ -1.5
GDE1-202ENST00000563645 PCDHA9Q9Y5H5 950 aa5.65□□□□□ -1.5
GDE1-202ENST00000563645 PTCH2Q9Y6C5 1203 aa5.65□□□□□ -1.5
GDE1-202ENST00000563645 CCDC163A0A0D9SF12 145 aa5.64□□□□□ -1.51
GDE1-202ENST00000563645 TCRBV5S4A2TA0A5A2 114 aa5.64□□□□□ -1.51
GDE1-202ENST00000563645 PRICKLE3O43900 615 aaPredicted RBP5.64□□□□□ -1.51
GDE1-202ENST00000563645 CRTAMO95727 393 aa5.64□□□□□ -1.51
GDE1-202ENST00000563645 PYGMP11217 842 aa5.64□□□□□ -1.51
GDE1-202ENST00000563645 CNR2P34972 360 aa5.64□□□□□ -1.51
GDE1-202ENST00000563645 BMS1Q14692 1282 aaKnown RBP5.64□□□□□ -1.51
GDE1-202ENST00000563645 TRIM61Q5EBN2 209 aa5.64□□□□□ -1.51
GDE1-202ENST00000563645 FAM47CQ5HY64 1035 aa5.64□□□□□ -1.51
GDE1-202ENST00000563645 FIGNQ5HY92 759 aa5.64□□□□□ -1.51
GDE1-202ENST00000563645 UBXN11Q5T124 520 aa5.64□□□□□ -1.51
GDE1-202ENST00000563645 CD276Q5ZPR3 534 aa5.64□□□□□ -1.51
GDE1-202ENST00000563645 MCTP2Q6DN12 878 aa5.64□□□□□ -1.51
GDE1-202ENST00000563645 C16orf59Q7L2K0 433 aa5.64□□□□□ -1.51
GDE1-202ENST00000563645 ZC3H7AQ8IWR0 971 aaKnown RBP5.64□□□□□ -1.51
GDE1-202ENST00000563645 ZCCHC14Q8WYQ9 949 aaKnown RBP5.64□□□□□ -1.51
GDE1-202ENST00000563645 YTHDC1Q96MU7 727 aaKnown RBP5.64□□□□□ -1.51
GDE1-202ENST00000563645 L2HGDHQ9H9P8 463 aa5.64□□□□□ -1.51
GDE1-202ENST00000563645 CATSPERZQ9NTU4 200 aa5.64□□□□□ -1.51
GDE1-202ENST00000563645 CBLCQ9ULV8 474 aa5.64□□□□□ -1.51
GDE1-202ENST00000563645 CDK11AQ9UQ88 783 aaPredicted RBP5.64□□□□□ -1.51
GDE1-202ENST00000563645 DUSP10Q9Y6W6 482 aa5.64□□□□□ -1.51
GDE1-202ENST00000563645 CCDC66A2RUB6 948 aa5.63□□□□□ -1.51
GDE1-202ENST00000563645 MROH6A6NGR9 719 aa5.63□□□□□ -1.51
GDE1-202ENST00000563645 C9orf118A6NHY6 69 aa5.63□□□□□ -1.51
GDE1-202ENST00000563645 MAN2B1O00754 1011 aa5.63□□□□□ -1.51
GDE1-202ENST00000563645 GSTA4O15217 222 aa5.63□□□□□ -1.51
GDE1-202ENST00000563645 SRGAP2CP0DJJ0 459 aa5.63□□□□□ -1.51
GDE1-202ENST00000563645 IL13P35225 146 aa5.63□□□□□ -1.51
GDE1-202ENST00000563645 MLLT6P55198 1093 aaPredicted RBP5.63□□□□□ -1.51
GDE1-202ENST00000563645 ST5P78524 1137 aa5.63□□□□□ -1.51
GDE1-202ENST00000563645 BORAQ6PGQ7 559 aa5.63□□□□□ -1.51
GDE1-202ENST00000563645 ARHGAP36Q6ZRI8 547 aa5.63□□□□□ -1.51
GDE1-202ENST00000563645 FERMT3Q86UX7 667 aa5.63□□□□□ -1.51
GDE1-202ENST00000563645 FAM124AQ86V42 546 aa5.63□□□□□ -1.51
GDE1-202ENST00000563645 NLGN4XQ8N0W4 816 aa5.63□□□□□ -1.51
GDE1-202ENST00000563645 LILRB2Q8N423 598 aa5.63□□□□□ -1.51
GDE1-202ENST00000563645 DDX1Q92499 740 aaKnown RBP5.63□□□□□ -1.51
GDE1-202ENST00000563645 UBXN4Q92575 508 aa5.63□□□□□ -1.51
GDE1-202ENST00000563645 LCORQ96JN0 433 aaPredicted RBP5.63□□□□□ -1.51
GDE1-202ENST00000563645 DRC1Q96MC2 740 aa5.63□□□□□ -1.51
GDE1-202ENST00000563645 BDH2Q9BUT1 245 aa5.63□□□□□ -1.51
GDE1-202ENST00000563645 MRPL4Q9BYD3 311 aaKnown RBP5.63□□□□□ -1.51
GDE1-202ENST00000563645 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.62□□□□□ -1.51
GDE1-202ENST00000563645 ZNF839A8K0R7 811 aa5.62□□□□□ -1.51
GDE1-202ENST00000563645 ZNF561-AS1K7EIQ3 104 aa5.62□□□□□ -1.51
GDE1-202ENST00000563645 ACOT7O00154 380 aa5.62□□□□□ -1.51
GDE1-202ENST00000563645 RASGRP1O95267 797 aa5.62□□□□□ -1.51
GDE1-202ENST00000563645 AMY2AP04746 511 aa5.62□□□□□ -1.51
GDE1-202ENST00000563645 CYP1A1P04798 512 aaPredicted RBP5.62□□□□□ -1.51
GDE1-202ENST00000563645 APPP05067 770 aa5.62□□□□□ -1.51
GDE1-202ENST00000563645 CELA3BP08861 270 aa5.62□□□□□ -1.51
GDE1-202ENST00000563645 COL6A1P12109 1028 aa5.62□□□□□ -1.51
GDE1-202ENST00000563645 PDE6AP16499 860 aa5.62□□□□□ -1.51
GDE1-202ENST00000563645 AMY2BP19961 511 aa5.62□□□□□ -1.51
GDE1-202ENST00000563645 KIAA2012Q0VF49 1180 aa5.62□□□□□ -1.51
GDE1-202ENST00000563645 CRY1Q16526 586 aa5.62□□□□□ -1.51
GDE1-202ENST00000563645 SKIDA1Q1XH10 827 aa5.62□□□□□ -1.51
GDE1-202ENST00000563645 TRMT10BQ6PF06 316 aaKnown RBP5.62□□□□□ -1.51
GDE1-202ENST00000563645 PTRH1Q86Y79 214 aaKnown RBP5.62□□□□□ -1.51
GDE1-202ENST00000563645 SLC7A14Q8TBB6 771 aa5.62□□□□□ -1.51
GDE1-202ENST00000563645 TMEM168Q9H0V1 697 aa5.62□□□□□ -1.51
GDE1-202ENST00000563645 FTSJ1Q9UET6 329 aa5.62□□□□□ -1.51
GDE1-202ENST00000563645 ATP23Q9Y6H3 246 aa5.62□□□□□ -1.51
GDE1-202ENST00000563645 KCNQ2O43526 872 aa5.61□□□□□ -1.51
GDE1-202ENST00000563645 CHGBP05060 677 aa5.61□□□□□ -1.51
GDE1-202ENST00000563645 CKMP06732 381 aa5.61□□□□□ -1.51
GDE1-202ENST00000563645 ENO2P09104 434 aaPredicted RBP5.61□□□□□ -1.51
GDE1-202ENST00000563645 PTPN1P18031 435 aaKnown RBP5.61□□□□□ -1.51
GDE1-202ENST00000563645 KRT15P19012 456 aa5.61□□□□□ -1.51
GDE1-202ENST00000563645 GJA4P35212 333 aa5.61□□□□□ -1.51
GDE1-202ENST00000563645 DNM2P50570 870 aa5.61□□□□□ -1.51
GDE1-202ENST00000563645 SKOR2Q2VWA4 1001 aaPredicted RBP5.61□□□□□ -1.51
GDE1-202ENST00000563645 PHF19Q5T6S3 580 aa5.61□□□□□ -1.51
GDE1-202ENST00000563645 BTBD8Q5XKL5 378 aa5.61□□□□□ -1.51
GDE1-202ENST00000563645 BRAPQ7Z569 592 aa5.61□□□□□ -1.51
GDE1-202ENST00000563645 OSTM1Q86WC4 334 aa5.61□□□□□ -1.51
GDE1-202ENST00000563645 LGI4Q8N135 537 aa5.61□□□□□ -1.51
GDE1-202ENST00000563645 MRFAP1L1Q96HT8 127 aa5.61□□□□□ -1.51
GDE1-202ENST00000563645 MAGEB10Q96LZ2 347 aaPredicted RBP5.61□□□□□ -1.51
GDE1-202ENST00000563645 NCOA5Q9HCD5 579 aaKnown RBP5.61□□□□□ -1.51
GDE1-202ENST00000563645 SMURF1Q9HCE7 757 aa5.61□□□□□ -1.51
GDE1-202ENST00000563645 RIC8BQ9NVN3 520 aa5.61□□□□□ -1.51
GDE1-202ENST00000563645 ARHGAP20Q9P2F6 1191 aa5.61□□□□□ -1.51
GDE1-202ENST00000563645 ZFP69BQ9UJL9 534 aa5.61□□□□□ -1.51
GDE1-202ENST00000563645 FAM90A27PA6NNH2 459 aa5.6□□□□□ -1.51
GDE1-202ENST00000563645 FBXO21O94952 628 aa5.6□□□□□ -1.51
GDE1-202ENST00000563645 BUD31P41223 144 aaPredicted RBP5.6□□□□□ -1.51
GDE1-202ENST00000563645 GLRBP48167 497 aa5.6□□□□□ -1.51
GDE1-202ENST00000563645 JAM2P57087 298 aa5.6□□□□□ -1.51
GDE1-202ENST00000563645 LACTBP83111 547 aaPredicted RBP5.6□□□□□ -1.51
GDE1-202ENST00000563645 PFKPQ01813 784 aa5.6□□□□□ -1.51
GDE1-202ENST00000563645 DBPQ10586 325 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms