RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 NOVA2Q9UNW9 492 aaKnown RBP12.95□□□□□ -0.34
ABCA3-203ENST00000563623 BCL9LQ86UU0 1499 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 POTEB3A0JP26 581 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 A6NNZ2 444 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 POTECB2RU33 542 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 GNPATO15228 680 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 TLR2O60603 784 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 HNRNPH3P31942 346 aaKnown RBP12.95□□□□□ -0.34
ABCA3-203ENST00000563623 NAB2Q15742 525 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 TUBB8Q3ZCM7 444 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 POTEBQ6S5H4 581 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 LRRC55Q6ZSA7 311 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 SCLT1Q96NL6 688 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 SPZ1Q9BXG8 430 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 FGFBP2Q9BYJ0 223 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 NUCKS1Q9H1E3 243 aaKnown RBP12.95□□□□□ -0.34
ABCA3-203ENST00000563623 EMILIN3Q9NT22 766 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 DCCP43146 1447 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 ABCB4P21439 1286 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 MDH1P40925 334 aaKnown RBP12.94□□□□□ -0.34
ABCA3-203ENST00000563623 KCNH2Q12809 1159 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 SLC18A3Q16572 532 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 DAAM2Q86T65 1068 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 VPS36Q86VN1 386 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 WHAMMQ8TF30 809 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 RNF14Q9UBS8 474 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 CICQ96RK0 1608 aaPredicted RBP12.94□□□□□ -0.34
ABCA3-203ENST00000563623 SLC9A1P19634 815 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 STAT3P40763 770 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 ITIH3Q06033 890 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 PTGISQ16647 500 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 DPP8Q6V1X1 898 aaPredicted RBP12.94□□□□□ -0.34
ABCA3-203ENST00000563623 ZNF804AQ7Z570 1209 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 EGFL6Q8IUX8 553 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 LRRC45Q96CN5 670 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 SELENOSQ9BQE4 189 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 AMACRQ9UHK6 382 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 PCDHB13Q9Y5F0 798 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 DAPK3O43293 454 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 CDC37Q16543 378 aaPredicted RBP12.94□□□□□ -0.34
ABCA3-203ENST00000563623 HGSNATQ68CP4 663 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 CNKSR2Q8WXI2 1034 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 NYXQ9GZU5 481 aa12.94□□□□□ -0.34
ABCA3-203ENST00000563623 TAF1DQ9H5J8 278 aaPredicted RBP12.94□□□□□ -0.34
ABCA3-203ENST00000563623 GRID2IPA4D2P6 1211 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 PLA2G4BP0C869 781 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 SKOR1P84550 965 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 ACTN3Q08043 901 aaPredicted RBP12.93□□□□□ -0.34
ABCA3-203ENST00000563623 SEMA3FQ13275 785 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 PABPC4Q13310 644 aaKnown RBP eCLIP12.93□□□□□ -0.34
ABCA3-203ENST00000563623 IFI16Q16666 785 aaKnown RBP12.93□□□□□ -0.34
ABCA3-203ENST00000563623 ALKBH5Q6P6C2 394 aaKnown RBP12.93□□□□□ -0.34
ABCA3-203ENST00000563623 MARCH10Q8NA82 808 aaPredicted RBP12.93□□□□□ -0.34
ABCA3-203ENST00000563623 MYCBPAPQ8TBZ2 947 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 ARMCX3Q9UH62 379 aaPredicted RBP12.93□□□□□ -0.34
ABCA3-203ENST00000563623 FBXL5Q9UKA1 691 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 HDAC9Q9UKV0 1011 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 TAF1P21675 1872 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 HMGB1P1B2RPK0 211 aaPredicted RBP12.93□□□□□ -0.34
ABCA3-203ENST00000563623 C6orf229H3BNL8 230 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 CLIC2O15247 247 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 PJA2O43164 708 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 UFL1O94874 794 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 TTBK2Q6IQ55 1244 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 KCTD1Q719H9 257 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 TAX1BP1Q86VP1 789 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 IQCKQ8N0W5 287 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 USP38Q8NB14 1042 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 RNF217Q8TC41 542 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 SLIT2O94813 1529 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 SART1O43290 800 aaKnown RBP12.93□□□□□ -0.34
ABCA3-203ENST00000563623 SARNPP82979 210 aaKnown RBP12.93□□□□□ -0.34
ABCA3-203ENST00000563623 PTK2Q05397 1052 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 DHX9Q08211 1270 aaKnown RBP12.93□□□□□ -0.34
ABCA3-203ENST00000563623 ECM1Q16610 540 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 KDM7AQ6ZMT4 941 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 GDF3Q9NR23 364 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 ATP8A1Q9Y2Q0 1164 aa12.93□□□□□ -0.34
ABCA3-203ENST00000563623 TMEM110-MUSTN1A8MSY1 372 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 USP17L15C9J2P7 530 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 USP17L13C9JLJ4 530 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 USP17L11C9JVI0 530 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 USP17L18D6R9N7 530 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 USP17L22D6RA61 530 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 USP17L17D6RBQ6 530 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 USP17L19D6RCP7 530 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 USP17L20D6RJB6 530 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 KIF4AO95239 1232 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 HSD17B3P37058 310 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 MRPL12P52815 198 aaKnown RBP12.92□□□□□ -0.34
ABCA3-203ENST00000563623 ERVK-9P63128 1117 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 CYP4A11Q02928 519 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 USP17L24Q0WX57 530 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 PSMD2Q13200 908 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 NFIXQ14938 502 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 EXOC3L4Q17RC7 722 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 USP17L6PQ6QN14 398 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 CLEC4GQ6UXB4 293 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 NEDD1Q8NHV4 660 aa12.92□□□□□ -0.34
ABCA3-203ENST00000563623 ANKS1AQ92625 1134 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms