RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 CCDC65Q8IXS2 484 aa10.46□□□□□ -0.73
LINC00838-201ENST00000562956 CCAR2Q8N163 923 aaKnown RBP10.46□□□□□ -0.73
LINC00838-201ENST00000562956 PIGOQ8TEQ8 1089 aa10.46□□□□□ -0.73
LINC00838-201ENST00000562956 C16orf45Q96MC5 204 aaPredicted RBP10.46□□□□□ -0.73
LINC00838-201ENST00000562956 BHMT2Q9H2M3 363 aa10.46□□□□□ -0.73
LINC00838-201ENST00000562956 MAP3K20Q9NYL2 800 aaKnown RBP10.46□□□□□ -0.73
LINC00838-201ENST00000562956 FRMPD4Q14CM0 1322 aa10.46□□□□□ -0.73
LINC00838-201ENST00000562956 FRMD3A2A2Y4 597 aa10.46□□□□□ -0.74
LINC00838-201ENST00000562956 ZBTB39O15060 712 aa10.46□□□□□ -0.74
LINC00838-201ENST00000562956 KRT18P05783 430 aaKnown RBP10.46□□□□□ -0.74
LINC00838-201ENST00000562956 GIT2Q14161 759 aa10.46□□□□□ -0.74
LINC00838-201ENST00000562956 PGM5Q15124 567 aa10.46□□□□□ -0.74
LINC00838-201ENST00000562956 TKFCQ3LXA3 575 aa10.46□□□□□ -0.74
LINC00838-201ENST00000562956 HERC4Q5GLZ8 1057 aaPredicted RBP10.46□□□□□ -0.74
LINC00838-201ENST00000562956 RMDN3Q96TC7 470 aa10.46□□□□□ -0.74
LINC00838-201ENST00000562956 TUFT1Q9NNX1 390 aa10.46□□□□□ -0.74
LINC00838-201ENST00000562956 WRAP73Q9P2S5 460 aaPredicted RBP10.46□□□□□ -0.74
LINC00838-201ENST00000562956 MAGEC2Q9UBF1 373 aaPredicted RBP10.46□□□□□ -0.74
LINC00838-201ENST00000562956 PNMA2Q9UL42 364 aa10.46□□□□□ -0.74
LINC00838-201ENST00000562956 UBIAD1Q9Y5Z9 338 aa10.46□□□□□ -0.74
LINC00838-201ENST00000562956 DDX39AO00148 427 aaKnown RBP10.45□□□□□ -0.74
LINC00838-201ENST00000562956 BCRP11274 1271 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 UBXN1Q04323 297 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 BAATQ14032 418 aaPredicted RBP10.45□□□□□ -0.74
LINC00838-201ENST00000562956 MYOCDQ8IZQ8 938 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 SAMD3Q8N6K7 520 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 CCDC112Q8NEF3 446 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 MYRIPQ8NFW9 859 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 CPLX3Q8WVH0 158 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 CNOT6LQ96LI5 555 aaKnown RBP10.45□□□□□ -0.74
LINC00838-201ENST00000562956 REEP2Q9BRK0 252 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 RUSC1Q9BVN2 902 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 TEKT3Q9BXF9 490 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 ZHX3Q9H4I2 956 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 SPDYE16A6NNV3 312 aaPredicted RBP10.45□□□□□ -0.74
LINC00838-201ENST00000562956 LGALS16A8MUM7 142 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 AKR1B15C9JRZ8 316 aaPredicted RBP10.45□□□□□ -0.74
LINC00838-201ENST00000562956 DHX15O43143 795 aaKnown RBP10.45□□□□□ -0.74
LINC00838-201ENST00000562956 NRDCO43847 1150 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 EYA4O95677 639 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 GYPCP04921 128 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 OAZ1P54368 228 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 ITGB3BPQ13352 177 aaPredicted RBP10.45□□□□□ -0.74
LINC00838-201ENST00000562956 SH3D19Q5HYK7 790 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 TREML2Q5T2D2 321 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 ITIH6Q6UXX5 1313 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 PPFIBP1Q86W92 1011 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 PHIPQ8WWQ0 1821 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 RIT2Q99578 217 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 TUBGCP2Q9BSJ2 902 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 AGO4Q9HCK5 861 aaKnown RBP10.45□□□□□ -0.74
LINC00838-201ENST00000562956 POLD4Q9HCU8 107 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 JADE2Q9NQC1 790 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 PXMP2Q9NR77 195 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 KCND1Q9NSA2 647 aa10.45□□□□□ -0.74
LINC00838-201ENST00000562956 B4DLN1 442 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 PPP1R12BO60237 982 aaPredicted RBP10.44□□□□□ -0.74
LINC00838-201ENST00000562956 MYCLP12524 364 aaPredicted RBP10.44□□□□□ -0.74
LINC00838-201ENST00000562956 CASP14P31944 242 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 KCNJ6P48051 423 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 MTMR1Q13613 665 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 NIPA1Q7RTP0 329 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 RBM46Q8TBY0 533 aaKnown RBP10.44□□□□□ -0.74
LINC00838-201ENST00000562956 ZNF507Q8TCN5 953 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 BAG1Q99933 345 aaPredicted RBP10.44□□□□□ -0.74
LINC00838-201ENST00000562956 PDCD2LQ9BRP1 358 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 BCAS3Q9H6U6 928 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 CGNQ9P2M7 1197 aaKnown RBP10.44□□□□□ -0.74
LINC00838-201ENST00000562956 RSPH10B2B2RC85 870 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 PES1O00541 588 aaKnown RBP10.44□□□□□ -0.74
LINC00838-201ENST00000562956 RSPH10BP0C881 870 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 FXR1P51114 621 aaKnown RBP eCLIP10.44□□□□□ -0.74
LINC00838-201ENST00000562956 LRRC63Q05C16 580 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 PLS1Q14651 629 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 UTP14CQ5TAP6 766 aaKnown RBP10.44□□□□□ -0.74
LINC00838-201ENST00000562956 ARHGEF16Q5VV41 709 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 DPY19L2Q6NUT2 758 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 MOB2Q70IA6 237 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 MB21D1Q8N884 522 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 SCFD1Q8WVM8 642 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 L3MBTL3Q96JM7 780 aaPredicted RBP10.44□□□□□ -0.74
LINC00838-201ENST00000562956 CSADQ9Y600 493 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 RLFQ13129 1914 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 RNF225M0QZC1 329 aaPredicted RBP10.44□□□□□ -0.74
LINC00838-201ENST00000562956 ATP2A1O14983 1001 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 PEX10O60683 326 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 HOXA7P31268 230 aaPredicted RBP10.44□□□□□ -0.74
LINC00838-201ENST00000562956 CASP5P51878 434 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 EPHA7Q15375 998 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 ZCWPW2Q504Y3 356 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 MIIPQ5JXC2 388 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 RINT1Q6NUQ1 792 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 LRRC55Q6ZSA7 311 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 FAM114A1Q8IWE2 563 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 NELFCDQ8IXH7 590 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 BANK1Q8NDB2 785 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 CLMNQ96JQ2 1002 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 TEX13BQ9BXU2 312 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 ELP3Q9H9T3 547 aa10.44□□□□□ -0.74
LINC00838-201ENST00000562956 HOXC10Q9NYD6 342 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms