RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 PPFIA3O75145 1194 aa13.14□□□□□ -0.31
FANCA-209ENST00000562424 CYP2C9P11712 490 aa13.14□□□□□ -0.31
FANCA-209ENST00000562424 CSF2RAP15509 400 aa13.14□□□□□ -0.31
FANCA-209ENST00000562424 KCNA2P16389 499 aa13.14□□□□□ -0.31
FANCA-209ENST00000562424 SREBF1P36956 1147 aa13.14□□□□□ -0.31
FANCA-209ENST00000562424 STK3Q13188 491 aa13.14□□□□□ -0.31
FANCA-209ENST00000562424 MTMR1Q13613 665 aa13.14□□□□□ -0.31
FANCA-209ENST00000562424 KIAA0753Q2KHM9 967 aa13.14□□□□□ -0.31
FANCA-209ENST00000562424 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
FANCA-209ENST00000562424 GIMAP8Q8ND71 665 aaPredicted RBP13.14□□□□□ -0.31
FANCA-209ENST00000562424 C16orf70Q9BSU1 422 aa13.14□□□□□ -0.31
FANCA-209ENST00000562424 C6orf50Q9HD87 102 aa13.14□□□□□ -0.31
FANCA-209ENST00000562424 JADE2Q9NQC1 790 aa13.14□□□□□ -0.31
FANCA-209ENST00000562424 TMEM260Q9NX78 707 aa13.14□□□□□ -0.31
FANCA-209ENST00000562424 TET1Q8NFU7 2136 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 ATP9AO75110 1047 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 LGALS2P05162 132 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 GNA11P29992 359 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 SSRP1Q08945 709 aaKnown RBP13.13□□□□□ -0.31
FANCA-209ENST00000562424 ANKRD1Q15327 319 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 PTGISQ16647 500 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 JAKMIP3Q5VZ66 844 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 MCTP2Q6DN12 878 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 GDF6Q6KF10 455 aaPredicted RBP13.13□□□□□ -0.31
FANCA-209ENST00000562424 CPLX2Q6PUV4 134 aaKnown RBP13.13□□□□□ -0.31
FANCA-209ENST00000562424 REXO1Q8N1G1 1221 aaKnown RBP13.13□□□□□ -0.31
FANCA-209ENST00000562424 CCDC148Q8NFR7 591 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 FAM161BQ96MY7 647 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 CTAGE1Q96RT6 745 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 GPR20Q99678 358 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 MXRA8Q9BRK3 442 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 ALG1Q9BT22 464 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 WNT8AQ9H1J5 351 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 SH3GLB2Q9NR46 395 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 HDAC6Q9UBN7 1215 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 GTF2IRD1Q9UHL9 959 aa13.13□□□□□ -0.31
FANCA-209ENST00000562424 H3BRB1 525 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 ADAMTS3O15072 1205 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 PFKFB2O60825 505 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 DEXIO95424 95 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 AK2P54819 239 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 CCL23P55773 120 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 ARHGAP4P98171 946 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 SCRN1Q12765 414 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 C8orf34Q49A92 452 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 CEP55Q53EZ4 464 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 TMEM240Q5SV17 173 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 C16orf59Q7L2K0 433 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 C7orf31Q8N865 590 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 CYP2W1Q8TAV3 490 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 BICD2Q8TD16 824 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 CRYGNQ8WXF5 182 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 RNPC3Q96LT9 517 aaKnown RBP13.12□□□□□ -0.31
FANCA-209ENST00000562424 CDX2Q99626 313 aaPredicted RBP13.12□□□□□ -0.31
FANCA-209ENST00000562424 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.12□□□□□ -0.312e-15■■□□□ 11.6
FANCA-209ENST00000562424 SLKQ9H2G2 1235 aaPredicted RBP13.12□□□□□ -0.31
FANCA-209ENST00000562424 SEMA6BQ9H3T3 888 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 TUT1Q9H6E5 874 aaKnown RBP13.12□□□□□ -0.31
FANCA-209ENST00000562424 IL23AQ9NPF7 189 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 KCNH7Q9NS40 1196 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 VPS54Q9P1Q0 977 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 TPCN1Q9ULQ1 816 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 NOD1Q9Y239 953 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 TELO2Q9Y4R8 837 aa13.12□□□□□ -0.31
FANCA-209ENST00000562424 MEIS1O00470 390 aa13.11□□□□□ -0.31
FANCA-209ENST00000562424 CYP3A4P08684 503 aa13.11□□□□□ -0.31
FANCA-209ENST00000562424 SP4Q02446 784 aa13.11□□□□□ -0.31
FANCA-209ENST00000562424 ZNF697Q5TEC3 545 aa13.11□□□□□ -0.31
FANCA-209ENST00000562424 PSRC1Q6PGN9 363 aaPredicted RBP13.11□□□□□ -0.31
FANCA-209ENST00000562424 NIPA1Q7RTP0 329 aa13.11□□□□□ -0.31
FANCA-209ENST00000562424 VCANP13611 3396 aa13.11□□□□□ -0.31
FANCA-209ENST00000562424 WDR81Q562E7 1941 aa13.11□□□□□ -0.31
FANCA-209ENST00000562424 NFASCO94856 1347 aa13.11□□□□□ -0.31
FANCA-209ENST00000562424 MYH9P35579 1960 aaKnown RBP13.11□□□□□ -0.31
FANCA-209ENST00000562424 CDKL5O76039 1030 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 ARP10275 920 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 ACRP10323 421 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 HOXC8P31273 242 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 TCF7P36402 384 aaPredicted RBP13.1□□□□□ -0.31
FANCA-209ENST00000562424 ZNF76P36508 570 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 NEK4P51957 841 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 NLRP5P59047 1200 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 RBL2Q08999 1139 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 BFSP2Q13515 415 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 RASIP1Q5U651 963 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 MAMSTRQ6ZN01 415 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 ZNF365Q70YC5 407 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 TRIM50Q86XT4 487 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 RPUSD2Q8IZ73 545 aaKnown RBP13.1□□□□□ -0.31
FANCA-209ENST00000562424 FAM177A1Q8N128 213 aaPredicted RBP13.1□□□□□ -0.31
FANCA-209ENST00000562424 CCDC155Q8N6L0 562 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 CAGE1Q8TC20 777 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 SEPT1Q8WYJ6 367 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 DHX38Q92620 1227 aaKnown RBP13.1□□□□□ -0.31
FANCA-209ENST00000562424 VWCEQ96DN2 955 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 SCLYQ96I15 445 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 PKD2L1Q9P0L9 805 aa13.1□□□□□ -0.31
FANCA-209ENST00000562424 ZNF215Q9UL58 517 aaPredicted RBP13.1□□□□□ -0.31
FANCA-209ENST00000562424 ARIH1Q9Y4X5 557 aaPredicted RBP13.1□□□□□ -0.31
FANCA-209ENST00000562424 IGLV3-22A0A075B6J6 115 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms