RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 WHRNQ9P202 907 aa7.3□□□□□ -1.24
UBR1-203ENST00000562173 FHOD1Q9Y613 1164 aa7.3□□□□□ -1.24
UBR1-203ENST00000562173 LAMB4A4D0S4 1761 aa7.3□□□□□ -1.24
UBR1-203ENST00000562173 HEG1Q9ULI3 1381 aa7.3□□□□□ -1.24
UBR1-203ENST00000562173 COL3A1P02461 1466 aaPredicted RBP7.3□□□□□ -1.24
UBR1-203ENST00000562173 DUOX1Q9NRD9 1551 aa7.29□□□□□ -1.24
UBR1-203ENST00000562173 A0A087WZG4 1122 aa7.29□□□□□ -1.24
UBR1-203ENST00000562173 U2SURPO15042 1029 aaKnown RBP7.29□□□□□ -1.24
UBR1-203ENST00000562173 CBFA2T2O43439 604 aa7.29□□□□□ -1.24
UBR1-203ENST00000562173 LRRN2O75325 713 aa7.29□□□□□ -1.24
UBR1-203ENST00000562173 HSP90AB1P08238 724 aaKnown RBP7.29□□□□□ -1.24
UBR1-203ENST00000562173 ITGA4P13612 1032 aa7.29□□□□□ -1.24
UBR1-203ENST00000562173 ENDOUP21128 410 aaKnown RBP7.29□□□□□ -1.24
UBR1-203ENST00000562173 PDE6BP35913 854 aa7.29□□□□□ -1.24
UBR1-203ENST00000562173 DCTN1Q14203 1278 aa7.29□□□□□ -1.24
UBR1-203ENST00000562173 TCEAL1Q15170 157 aa7.29□□□□□ -1.24
UBR1-203ENST00000562173 CLEC16AQ2KHT3 1053 aa7.29□□□□□ -1.24
UBR1-203ENST00000562173 CCDC93Q567U6 631 aa7.29□□□□□ -1.24
UBR1-203ENST00000562173 LARP1BQ659C4 914 aaKnown RBP7.29□□□□□ -1.24
UBR1-203ENST00000562173 STYK1Q6J9G0 422 aa7.29□□□□□ -1.24
UBR1-203ENST00000562173 NGEFQ8N5V2 710 aa7.29□□□□□ -1.24
UBR1-203ENST00000562173 FLCNQ8NFG4 579 aa7.29□□□□□ -1.24
UBR1-203ENST00000562173 MASTLQ96GX5 879 aa7.29□□□□□ -1.24
UBR1-203ENST00000562173 KRTAP4-12Q9BQ66 201 aa7.29□□□□□ -1.24
UBR1-203ENST00000562173 PRDM14Q9GZV8 571 aa7.29□□□□□ -1.24
UBR1-203ENST00000562173 EPN3Q9H201 632 aa7.29□□□□□ -1.24
UBR1-203ENST00000562173 ANKRD34BA5PLL1 514 aa7.28□□□□□ -1.24
UBR1-203ENST00000562173 IQCA1LA6NCM1 817 aa7.28□□□□□ -1.24
UBR1-203ENST00000562173 ADM5C9JUS6 153 aa7.28□□□□□ -1.24
UBR1-203ENST00000562173 WNT11O96014 354 aa7.28□□□□□ -1.24
UBR1-203ENST00000562173 MAP2K1Q02750 393 aaPredicted RBP7.28□□□□□ -1.24
UBR1-203ENST00000562173 DCAF15Q66K64 600 aa7.28□□□□□ -1.24
UBR1-203ENST00000562173 HEATR6Q6AI08 1181 aaKnown RBP7.28□□□□□ -1.24
UBR1-203ENST00000562173 NFXL1Q6ZNB6 911 aa7.28□□□□□ -1.24
UBR1-203ENST00000562173 MOB2Q70IA6 237 aa7.28□□□□□ -1.24
UBR1-203ENST00000562173 SAPCD2Q86UD0 394 aa7.28□□□□□ -1.24
UBR1-203ENST00000562173 WFDC3Q8IUB2 231 aa7.28□□□□□ -1.24
UBR1-203ENST00000562173 FAM178BQ8IXR5 827 aa7.28□□□□□ -1.24
UBR1-203ENST00000562173 GP6Q9HCN6 339 aa7.28□□□□□ -1.24
UBR1-203ENST00000562173 MIS18AQ9NYP9 233 aa7.28□□□□□ -1.24
UBR1-203ENST00000562173 SIRPGQ9P1W8 387 aa7.28□□□□□ -1.24
UBR1-203ENST00000562173 ZNF646O15015 1829 aaPredicted RBP7.28□□□□□ -1.24
UBR1-203ENST00000562173 BRCA2P51587 3418 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 PRAMEF1O95521 474 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 CD247P20963 164 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 GPTP24298 496 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 TPP2P29144 1249 aaPredicted RBP7.27□□□□□ -1.25
UBR1-203ENST00000562173 IKZF1Q13422 519 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 SERINC3Q13530 473 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 AMOTQ4VCS5 1084 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 KIAA1211LQ6NV74 962 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 C6orf15Q6UXA7 325 aaPredicted RBP7.27□□□□□ -1.25
UBR1-203ENST00000562173 TTLL7Q6ZT98 887 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 LRP10Q7Z4F1 713 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 NBPF5PQ86XG9 351 aaPredicted RBP7.27□□□□□ -1.25
UBR1-203ENST00000562173 DHX38Q92620 1227 aaKnown RBP7.27□□□□□ -1.25
UBR1-203ENST00000562173 ZNF669Q96BR6 464 aaPredicted RBP7.27□□□□□ -1.25
UBR1-203ENST00000562173 PHACTR3Q96KR7 559 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 R3HDMLQ9H3Y0 253 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 ATP13A1Q9HD20 1204 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 PAK6Q9NQU5 681 aaPredicted RBP7.27□□□□□ -1.25
UBR1-203ENST00000562173 CHST7Q9NS84 486 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 DUSP13Q9UII6 198 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 FBXL21Q9UKT6 434 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 CENPFP49454 3210 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 DDX60Q8IY21 1712 aaKnown RBP7.27□□□□□ -1.25
UBR1-203ENST00000562173 UBN2Q6ZU65 1347 aa7.27□□□□□ -1.25
UBR1-203ENST00000562173 SZT2Q5T011 3432 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 SHISA3A0PJX4 238 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 YDJCA8MPS7 323 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 NPHP1O15259 732 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 RAD17O75943 681 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 GSNP06396 782 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 EPHX1P07099 455 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 FUT4P22083 530 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 GMPSP49915 693 aaPredicted RBP7.26□□□□□ -1.25
UBR1-203ENST00000562173 IRAK1P51617 712 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 CAP1Q01518 475 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 SNW1Q13573 536 aaKnown RBP7.26□□□□□ -1.25
UBR1-203ENST00000562173 RNF111Q6ZNA4 994 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 EEPD1Q7L9B9 569 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 TMC3Q7Z5M5 1100 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 CRACR2BQ8N4Y2 399 aaPredicted RBP7.26□□□□□ -1.25
UBR1-203ENST00000562173 UBE2FQ969M7 185 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 CCDC120Q96HB5 630 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 GFOD1Q9NXC2 390 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 ZSWIM5Q9P217 1185 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 PCDHB10Q9UN67 800 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 MSRB2Q9Y3D2 182 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 SPEF2Q9C093 1822 aa7.26□□□□□ -1.25
UBR1-203ENST00000562173 ANKRD36CQ5JPF3 1778 aa7.25□□□□□ -1.25
UBR1-203ENST00000562173 HTTP42858 3142 aa7.25□□□□□ -1.25
UBR1-203ENST00000562173 PPM1BO75688 479 aa7.25□□□□□ -1.25
UBR1-203ENST00000562173 DDAH1O94760 285 aa7.25□□□□□ -1.25
UBR1-203ENST00000562173 TP53P04637 393 aaPredicted RBP7.25□□□□□ -1.25
UBR1-203ENST00000562173 NPR1P16066 1061 aa7.25□□□□□ -1.25
UBR1-203ENST00000562173 ST5P78524 1137 aa7.25□□□□□ -1.25
UBR1-203ENST00000562173 RBM10P98175 930 aaKnown RBP7.25□□□□□ -1.25
UBR1-203ENST00000562173 KIF23Q02241 960 aaPredicted RBP7.25□□□□□ -1.25
UBR1-203ENST00000562173 CXCL9Q07325 125 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms