RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 B3GNT9Q6UX72 402 aa14.02□□□□□ -0.17
AC055717.2-201ENST00000561864 RAD9BQ6WBX8 426 aa14.02□□□□□ -0.17
AC055717.2-201ENST00000561864 ZNF280CQ8ND82 737 aa14.02□□□□□ -0.17
AC055717.2-201ENST00000561864 OR8K1Q8NGG5 319 aa14.02□□□□□ -0.17
AC055717.2-201ENST00000561864 UIMC1Q96RL1 719 aa14.02□□□□□ -0.17
AC055717.2-201ENST00000561864 WRNIP1Q96S55 665 aa14.02□□□□□ -0.17
AC055717.2-201ENST00000561864 DNAJC7Q99615 494 aa14.02□□□□□ -0.17
AC055717.2-201ENST00000561864 REEP2Q9BRK0 252 aa14.02□□□□□ -0.17
AC055717.2-201ENST00000561864 KCND2Q9NZV8 630 aa14.02□□□□□ -0.17
AC055717.2-201ENST00000561864 SCAF8Q9UPN6 1271 aaKnown RBP14.02□□□□□ -0.17
AC055717.2-201ENST00000561864 LUC7L2Q9Y383 392 aaKnown RBP14.02□□□□□ -0.17
AC055717.2-201ENST00000561864 SSC5DA1L4H1 1573 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 NPHP3-ACAD11A0A0J9YXS1 232 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 C19orf81C9J6K1 198 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 NFIBO00712 420 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 ALAS1P13196 640 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 MARSP56192 900 aaKnown RBP14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 PSMC6P62333 389 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 CYP4A11Q02928 519 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 SPP2Q13103 211 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 LRRC41Q15345 812 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 BMT2Q1RMZ1 405 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 SUPT20HL1Q3ZLR7 823 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 XRRA1Q6P2D8 792 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 TRIM65Q6PJ69 517 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 SYT10Q6XYQ8 523 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 TRPM4Q8TD43 1214 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 DYDC2Q96IM9 177 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 TTYH3Q9C0H2 523 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 L2HGDHQ9H9P8 463 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 RAVER2Q9HCJ3 691 aaKnown RBP14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 COL4A3BPQ9Y5P4 624 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 UBIAD1Q9Y5Z9 338 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 ADGRG1Q9Y653 693 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 LOC285556D6RIA3 1793 aa14.01□□□□□ -0.17
AC055717.2-201ENST00000561864 UBE4BO95155 1302 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 MYPNQ86TC9 1320 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 TTC26A0AVF1 554 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 IPO5O00410 1097 aaKnown RBP14□□□□□ -0.17
AC055717.2-201ENST00000561864 GRIN3BO60391 1043 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 ARP10275 920 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 UBXN2AP68543 259 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 ZBED6P86452 979 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 ARHGAP27Q6ZUM4 889 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 EPM2AIP1Q7L775 607 aaPredicted RBP14□□□□□ -0.17
AC055717.2-201ENST00000561864 GLIS3Q8NEA6 775 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 ZNF397Q8NF99 534 aaPredicted RBP14□□□□□ -0.17
AC055717.2-201ENST00000561864 SYTL5Q8TDW5 730 aaPredicted RBP14□□□□□ -0.17
AC055717.2-201ENST00000561864 SCFD1Q8WVM8 642 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 NACC1Q96RE7 527 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 BHMT2Q9H2M3 363 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 KCTD10Q9H3F6 313 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 NDST4Q9H3R1 872 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 UNC45AQ9H3U1 944 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 OLFML3Q9NRN5 406 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 GGA3Q9NZ52 723 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 COL20A1Q9P218 1284 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 SEL1LQ9UBV2 794 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 PAPPA2Q9BXP8 1791 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 WDR90Q96KV7 1748 aa14□□□□□ -0.17
AC055717.2-201ENST00000561864 SMCHD1A6NHR9 2005 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 TRAF5O00463 557 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 VWA5AO00534 786 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 SLITRK3O94933 977 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 ITGB5P18084 799 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 TRIM21P19474 475 aaKnown RBP13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 ERVK-24P63145 666 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 MTF1Q14872 753 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 MEA1Q16626 185 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 CCDC40Q4G0X9 1142 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 MUM1L1Q5H9M0 696 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 MTERF4Q7Z6M4 381 aaKnown RBP13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 SFR1Q86XK3 245 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 CPXCR1Q8N123 301 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 PCMTD1Q96MG8 357 aaPredicted RBP13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 DESI2Q9BSY9 194 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 RUSC1Q9BVN2 902 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 EDEM3Q9BZQ6 932 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 ZHX3Q9H4I2 956 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 AGO4Q9HCK5 861 aaKnown RBP13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 JADE2Q9NQC1 790 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 ZNHIT6Q9NWK9 470 aaKnown RBP13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 RGL1Q9NZL6 768 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 DNAI1Q9UI46 699 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 TRAF3IP3Q9Y228 551 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 SIK3Q9Y2K2 1263 aa13.99□□□□□ -0.17
AC055717.2-201ENST00000561864 RLFQ13129 1914 aa13.98□□□□□ -0.17
AC055717.2-201ENST00000561864 RNF225M0QZC1 329 aaPredicted RBP13.98□□□□□ -0.17
AC055717.2-201ENST00000561864 PDXKO00764 312 aa13.98□□□□□ -0.17
AC055717.2-201ENST00000561864 EIF3DO15371 548 aaKnown RBP eCLIP13.98□□□□□ -0.17
AC055717.2-201ENST00000561864 CHMP2AO43633 222 aa13.98□□□□□ -0.17
AC055717.2-201ENST00000561864 CALUO43852 315 aaPredicted RBP13.98□□□□□ -0.17
AC055717.2-201ENST00000561864 SLU7O95391 586 aaKnown RBP13.98□□□□□ -0.17
AC055717.2-201ENST00000561864 CDK17Q00537 523 aa13.98□□□□□ -0.17
AC055717.2-201ENST00000561864 CACNB1Q02641 598 aaPredicted RBP13.98□□□□□ -0.17
AC055717.2-201ENST00000561864 PPP2R3AQ06190 1150 aa13.98□□□□□ -0.17
AC055717.2-201ENST00000561864 CTTNQ14247 550 aaKnown RBP13.98□□□□□ -0.17
AC055717.2-201ENST00000561864 KNOP1Q1ED39 458 aaKnown RBP13.98□□□□□ -0.17
AC055717.2-201ENST00000561864 TKFCQ3LXA3 575 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms