RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 PCK1P35558 622 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 POLE2P56282 527 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 ATG9AQ7Z3C6 839 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 SYMPKQ92797 1274 aaKnown RBP20.36■□□□□ 0.85
RAB40C-206ENST00000561781 XPO6Q96QU8 1125 aaKnown RBP20.36■□□□□ 0.85
RAB40C-206ENST00000561781 SYT15Q9BQS2 421 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 FAM129AQ9BZQ8 928 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 UBE2OQ9C0C9 1292 aaKnown RBP20.36■□□□□ 0.85
RAB40C-206ENST00000561781 PUS7LQ9H0K6 701 aaKnown RBP20.36■□□□□ 0.85
RAB40C-206ENST00000561781 BLZF1Q9H2G9 400 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 FOXP1Q9H334 677 aaPredicted RBP20.36■□□□□ 0.85
RAB40C-206ENST00000561781 AGPAT5Q9NUQ2 364 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 SAMD15Q9P1V8 674 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 LRWD1Q9UFC0 647 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 NFS1Q9Y697 457 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 HIP1RO75146 1068 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 SERPINB2P05120 415 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 ALDH1B1P30837 517 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 KLC1Q07866 573 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 ZNF844Q08AG5 666 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 PRCCQ92733 491 aaPredicted RBP20.36■□□□□ 0.85
RAB40C-206ENST00000561781 KIFAP3Q92845 792 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 IFT74Q96LB3 600 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 STK36Q9NRP7 1315 aa20.35■□□□□ 0.85
RAB40C-206ENST00000561781 ATP6V1C1P21283 382 aa20.35■□□□□ 0.85
RAB40C-206ENST00000561781 HMGB2P26583 209 aaKnown RBP20.35■□□□□ 0.85
RAB40C-206ENST00000561781 HSD17B3P37058 310 aa20.35■□□□□ 0.85
RAB40C-206ENST00000561781 NCALDP61601 193 aa20.35■□□□□ 0.85
RAB40C-206ENST00000561781 ERFEQ4G0M1 354 aa20.35■□□□□ 0.85
RAB40C-206ENST00000561781 TBC1D10CQ8IV04 446 aa20.35■□□□□ 0.85
RAB40C-206ENST00000561781 CASKIN2Q8WXE0 1202 aa20.35■□□□□ 0.85
RAB40C-206ENST00000561781 OPTNQ96CV9 577 aa20.35■□□□□ 0.85
RAB40C-206ENST00000561781 CCDC85AQ96PX6 553 aaPredicted RBP20.35■□□□□ 0.85
RAB40C-206ENST00000561781 IQCGQ9H095 443 aaKnown RBP20.35■□□□□ 0.85
RAB40C-206ENST00000561781 ADAM22Q9P0K1 906 aa20.35■□□□□ 0.85
RAB40C-206ENST00000561781 TRMT112Q9UI30 125 aaKnown RBP20.35■□□□□ 0.85
RAB40C-206ENST00000561781 AGAP1Q9UPQ3 857 aa20.35■□□□□ 0.85
RAB40C-206ENST00000561781 LGALS16A8MUM7 142 aa20.35■□□□□ 0.85
RAB40C-206ENST00000561781 NTSR2O95665 410 aa20.35■□□□□ 0.85
RAB40C-206ENST00000561781 PARP1P09874 1014 aaKnown RBP20.35■□□□□ 0.85
RAB40C-206ENST00000561781 CTNNA1P35221 906 aaKnown RBP20.35■□□□□ 0.85
RAB40C-206ENST00000561781 SPA17Q15506 151 aa20.35■□□□□ 0.85
RAB40C-206ENST00000561781 C3orf67Q6ZVT6 689 aa20.35■□□□□ 0.85
RAB40C-206ENST00000561781 SESTD1Q86VW0 696 aa20.35■□□□□ 0.85
RAB40C-206ENST00000561781 SYCP3Q8IZU3 236 aa20.35■□□□□ 0.85
RAB40C-206ENST00000561781 FGD4Q96M96 766 aa20.35■□□□□ 0.85
RAB40C-206ENST00000561781 MYH7P12883 1935 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 EIF4E1BA6NMX2 242 aaKnown RBP20.34■□□□□ 0.85
RAB40C-206ENST00000561781 IGF2BP3O00425 579 aaKnown RBP eCLIP20.34■□□□□ 0.85
RAB40C-206ENST00000561781 PENKP01210 267 aaPredicted RBP20.34■□□□□ 0.85
RAB40C-206ENST00000561781 GBP1P32455 592 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 TUBP50607 506 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 ENOX2Q16206 610 aaKnown RBP20.34■□□□□ 0.85
RAB40C-206ENST00000561781 LCA5Q86VQ0 697 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 IRF2BP1Q8IU81 584 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 GBP7Q8N8V2 638 aaPredicted RBP20.34■□□□□ 0.85
RAB40C-206ENST00000561781 FAM163AQ96GL9 167 aaPredicted RBP20.34■□□□□ 0.85
RAB40C-206ENST00000561781 SGIP1Q9BQI5 828 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 RMI1Q9H9A7 625 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 MLXIPQ9HAP2 919 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 ARHGEF10LQ9HCE6 1279 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 CABP5Q9NP86 173 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 DMAP1Q9NPF5 467 aaPredicted RBP20.34■□□□□ 0.85
RAB40C-206ENST00000561781 ATXN10Q9UBB4 475 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 NOVA2Q9UNW9 492 aaKnown RBP20.34■□□□□ 0.85
RAB40C-206ENST00000561781 MAPK8IP1Q9UQF2 711 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 AFDNP55196 1824 aaKnown RBP20.34■□□□□ 0.85
RAB40C-206ENST00000561781 ANKRD36CQ5JPF3 1778 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 MYH13Q9UKX3 1938 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 ZNF263O14978 683 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 MAP3K13O43283 966 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 MOCS3O95396 460 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 OATP04181 439 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 SP100P23497 879 aaPredicted RBP20.34■□□□□ 0.85
RAB40C-206ENST00000561781 MSH2P43246 934 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 PABPC1LQ4VXU2 614 aaKnown RBP20.34■□□□□ 0.85
RAB40C-206ENST00000561781 PRR5LQ6MZQ0 368 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 TMEM154Q6P9G4 183 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 LMBR1LQ6UX01 489 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 ZNF507Q8TCN5 953 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 OXER1Q8TDS5 423 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 FBF1Q8TES7 1133 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 ZNF317Q96PQ6 595 aaPredicted RBP20.34■□□□□ 0.85
RAB40C-206ENST00000561781 CTNNAL1Q9UBT7 734 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 TSKSQ9UJT2 592 aa20.34■□□□□ 0.85
RAB40C-206ENST00000561781 B4E1Z4 1266 aa20.33■□□□□ 0.85
RAB40C-206ENST00000561781 CTNND1O60716 968 aaKnown RBP20.33■□□□□ 0.85
RAB40C-206ENST00000561781 ATP6V1G1O75348 118 aa20.33■□□□□ 0.85
RAB40C-206ENST00000561781 RARAP10276 462 aa20.33■□□□□ 0.85
RAB40C-206ENST00000561781 LMNB2Q03252 620 aa20.33■□□□□ 0.85
RAB40C-206ENST00000561781 KRT26Q7Z3Y9 468 aa20.33■□□□□ 0.85
RAB40C-206ENST00000561781 WASF1Q92558 559 aa20.33■□□□□ 0.85
RAB40C-206ENST00000561781 KLHL29Q96CT2 875 aa20.33■□□□□ 0.85
RAB40C-206ENST00000561781 SLX1AQ9BQ83 275 aa20.33■□□□□ 0.85
RAB40C-206ENST00000561781 MAF1Q9H063 256 aa20.33■□□□□ 0.85
RAB40C-206ENST00000561781 RAB17Q9H0T7 212 aa20.33■□□□□ 0.85
RAB40C-206ENST00000561781 SH2D4AQ9H788 454 aa20.33■□□□□ 0.85
RAB40C-206ENST00000561781 ECT2Q9H8V3 914 aa20.33■□□□□ 0.85
RAB40C-206ENST00000561781 TMEM165Q9HC07 324 aa20.33■□□□□ 0.85
RAB40C-206ENST00000561781 XDHP47989 1333 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms