RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 DCP1AQ9NPI6 582 aaPredicted RBP5.14□□□□□ -1.59
HERC1-211ENST00000560983 EBF1Q9UH73 591 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 NIP7Q9Y221 180 aaKnown RBP eCLIP5.14□□□□□ -1.59
HERC1-211ENST00000560983 ATP6V0A2Q9Y487 856 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 PCDHA11Q9Y5I1 949 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 KIF7Q2M1P5 1343 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 PAPPA2Q9BXP8 1791 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 SHISA3A0PJX4 238 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 FITM1A5D6W6 292 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 PSMD14O00487 310 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 BPNT1O95861 308 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 BMP8BP34820 402 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 TRHRP34981 398 aaPredicted RBP5.13□□□□□ -1.59
HERC1-211ENST00000560983 SREBF2Q12772 1141 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 PWP1Q13610 501 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 HLFQ16534 295 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 PRAMEF18Q5VWM3 479 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 ERMP1Q7Z2K6 904 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 REC114Q7Z4M0 266 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 BAHD1Q8TBE0 780 aaPredicted RBP5.13□□□□□ -1.59
HERC1-211ENST00000560983 LINC01599Q8WXQ3 324 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 CCDC74BQ96LY2 380 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 GDF15Q99988 308 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 CARD11Q9BXL7 1154 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 TEX13AQ9BXU3 409 aaPredicted RBP5.13□□□□□ -1.59
HERC1-211ENST00000560983 GGA3Q9NZ52 723 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 NR2E3Q9Y5X4 410 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 PTCH2Q9Y6C5 1203 aa5.13□□□□□ -1.59
HERC1-211ENST00000560983 LAMA2P24043 3122 aaKnown RBP5.12□□□□□ -1.59
HERC1-211ENST00000560983 F6X3S4 739 aa5.12□□□□□ -1.59
HERC1-211ENST00000560983 ETV2O00321 342 aaPredicted RBP5.12□□□□□ -1.59
HERC1-211ENST00000560983 SORBS3O60504 671 aa5.12□□□□□ -1.59
HERC1-211ENST00000560983 ZSCAN22P10073 491 aaPredicted RBP5.12□□□□□ -1.59
HERC1-211ENST00000560983 TNNT2P45379 298 aaPredicted RBP5.12□□□□□ -1.59
HERC1-211ENST00000560983 PIP4K2AP48426 406 aaPredicted RBP5.12□□□□□ -1.59
HERC1-211ENST00000560983 INHBEP58166 350 aa5.12□□□□□ -1.59
HERC1-211ENST00000560983 SP3Q02447 781 aa5.12□□□□□ -1.59
HERC1-211ENST00000560983 MAP3K12Q12852 859 aa5.12□□□□□ -1.59
HERC1-211ENST00000560983 CRHR2Q13324 411 aa5.12□□□□□ -1.59
HERC1-211ENST00000560983 KCNA10Q16322 511 aa5.12□□□□□ -1.59
HERC1-211ENST00000560983 SLC9C1Q4G0N8 1177 aa5.12□□□□□ -1.59
HERC1-211ENST00000560983 DIEXFQ68CQ4 756 aaKnown RBP5.12□□□□□ -1.59
HERC1-211ENST00000560983 RELL1Q8IUW5 271 aa5.12□□□□□ -1.59
HERC1-211ENST00000560983 OXR1Q8N573 874 aa5.12□□□□□ -1.59
HERC1-211ENST00000560983 SUPT20HQ8NEM7 779 aa5.12□□□□□ -1.59
HERC1-211ENST00000560983 SH3TC2Q8TF17 1288 aa5.12□□□□□ -1.59
HERC1-211ENST00000560983 DHX38Q92620 1227 aaKnown RBP5.12□□□□□ -1.59
HERC1-211ENST00000560983 RBM17Q96I25 401 aaKnown RBP5.12□□□□□ -1.59
HERC1-211ENST00000560983 CWC22Q9HCG8 908 aaKnown RBP5.12□□□□□ -1.59
HERC1-211ENST00000560983 SCAF8Q9UPN6 1271 aaKnown RBP5.12□□□□□ -1.59
HERC1-211ENST00000560983 YBX2Q9Y2T7 364 aaKnown RBP5.12□□□□□ -1.59
HERC1-211ENST00000560983 USP16Q9Y5T5 823 aa5.12□□□□□ -1.59
HERC1-211ENST00000560983 RPTORQ8N122 1335 aa5.12□□□□□ -1.59
HERC1-211ENST00000560983 ABCC12Q96J65 1359 aa5.12□□□□□ -1.59
HERC1-211ENST00000560983 ARFGEF2Q9Y6D5 1785 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 NOTOA8MTQ0 251 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 NPIPB6E9PJ23 425 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 RGS13O14921 159 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 GREM1O60565 184 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 PEX10O60683 326 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 ATE1O95260 518 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 TMEM253P0C7T8 217 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 TAGLNQ01995 201 aaKnown RBP5.11□□□□□ -1.59
HERC1-211ENST00000560983 SNX17Q15036 470 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 LDLRAD1Q5T700 205 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 SULT6B1Q6IMI4 303 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 ZNF790Q6PG37 636 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 ATG14Q6ZNE5 492 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 TTLL10Q6ZVT0 673 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 SP8Q8IXZ3 490 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 ENOX1Q8TC92 643 aaKnown RBP5.11□□□□□ -1.59
HERC1-211ENST00000560983 RPGRQ92834 1020 aaKnown RBP5.11□□□□□ -1.59
HERC1-211ENST00000560983 PTPN18Q99952 460 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 HTATIP2Q9BUP3 242 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 HDAC8Q9BY41 377 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 SLC6A17Q9H1V8 727 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 SMG5Q9UPR3 1016 aaKnown RBP5.11□□□□□ -1.59
HERC1-211ENST00000560983 HEG1Q9ULI3 1381 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 ZNF609O15014 1411 aa5.11□□□□□ -1.59
HERC1-211ENST00000560983 MYOCOSA0A1B0GUC4 107 aa5.1□□□□□ -1.59
HERC1-211ENST00000560983 MANSC4A6NHS7 340 aaPredicted RBP5.1□□□□□ -1.59
HERC1-211ENST00000560983 KCNQ3O43525 872 aa5.1□□□□□ -1.59
HERC1-211ENST00000560983 UBOX5O94941 541 aa5.1□□□□□ -1.59
HERC1-211ENST00000560983 EFEMP2O95967 443 aa5.1□□□□□ -1.59
HERC1-211ENST00000560983 VIL1P09327 827 aaKnown RBP5.1□□□□□ -1.59
HERC1-211ENST00000560983 ERCC3P19447 782 aa5.1□□□□□ -1.59
HERC1-211ENST00000560983 RPS12P25398 132 aaKnown RBP5.1□□□□□ -1.59
HERC1-211ENST00000560983 GBP2P32456 591 aaPredicted RBP5.1□□□□□ -1.59
HERC1-211ENST00000560983 GJA8P48165 433 aa5.1□□□□□ -1.59
HERC1-211ENST00000560983 ZNF280AP59817 542 aaPredicted RBP5.1□□□□□ -1.59
HERC1-211ENST00000560983 CHRNEQ04844 493 aa5.1□□□□□ -1.59
HERC1-211ENST00000560983 FAM109BQ6ICB4 259 aaPredicted RBP5.1□□□□□ -1.59
HERC1-211ENST00000560983 DPP8Q6V1X1 898 aaPredicted RBP5.1□□□□□ -1.59
HERC1-211ENST00000560983 RBBP6Q7Z6E9 1792 aaKnown RBP5.1□□□□□ -1.59
HERC1-211ENST00000560983 ANKS4BQ8N8V4 417 aa5.1□□□□□ -1.59
HERC1-211ENST00000560983 GOLM1Q8NBJ4 401 aa5.1□□□□□ -1.59
HERC1-211ENST00000560983 RTL9Q8NET4 1388 aa5.1□□□□□ -1.59
HERC1-211ENST00000560983 FBXO27Q8NI29 283 aa5.1□□□□□ -1.59
HERC1-211ENST00000560983 SYTL5Q8TDW5 730 aaPredicted RBP5.1□□□□□ -1.59
HERC1-211ENST00000560983 TTC28Q96AY4 2481 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms