RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PGRMC1O00264 195 aaKnown RBP18.04■□□□□ 0.48
TPM1-228ENST00000560975 ANP32DO95626 131 aa18.04■□□□□ 0.48
TPM1-228ENST00000560975 GOLGA8HP0CJ92 632 aa18.04■□□□□ 0.48
TPM1-228ENST00000560975 CHN1P15882 459 aa18.04■□□□□ 0.48
TPM1-228ENST00000560975 CHRNDQ07001 517 aa18.04■□□□□ 0.48
TPM1-228ENST00000560975 SLC35G1Q2M3R5 365 aa18.04■□□□□ 0.48
TPM1-228ENST00000560975 METTL13Q8N6R0 699 aa18.04■□□□□ 0.48
TPM1-228ENST00000560975 PNMA1Q8ND90 353 aa18.04■□□□□ 0.48
TPM1-228ENST00000560975 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.04■□□□□ 0.48
TPM1-228ENST00000560975 AK8Q96MA6 479 aa18.04■□□□□ 0.48
TPM1-228ENST00000560975 ELAC2Q9BQ52 826 aaKnown RBP18.04■□□□□ 0.48
TPM1-228ENST00000560975 GOPCQ9HD26 462 aa18.04■□□□□ 0.48
TPM1-228ENST00000560975 TBC1D7Q9P0N9 293 aa18.04■□□□□ 0.48
TPM1-228ENST00000560975 MMEP08473 750 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 PRPHP41219 470 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 ERMARDQ5T6L9 678 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 UNC13DQ70J99 1090 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 SPDL1Q96EA4 605 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 TSG101Q99816 390 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 TRIM51Q9BSJ1 452 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 FAM129AQ9BZQ8 928 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 BLOC1S4Q9NUP1 217 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 MYH3P11055 1940 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 LAD1O00515 517 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 FGRP09769 529 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 USP11P51784 963 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 ASIC2Q16515 512 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 GUF1Q8N442 669 aaKnown RBP18.03■□□□□ 0.48
TPM1-228ENST00000560975 ANKS4BQ8N8V4 417 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 ZNF384Q8TF68 577 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 CDK5RAP3Q96JB5 506 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 SH3GLB2Q9NR46 395 aa18.03■□□□□ 0.48
TPM1-228ENST00000560975 C1orf167Q5SNV9 1468 aa18.02■□□□□ 0.48
TPM1-228ENST00000560975 SHBGP04278 402 aa18.02■□□□□ 0.48
TPM1-228ENST00000560975 IGHMBP2P38935 993 aaKnown RBP18.02■□□□□ 0.48
TPM1-228ENST00000560975 GRB10Q13322 594 aa18.02■□□□□ 0.48
TPM1-228ENST00000560975 LRRC34Q8IZ02 419 aa18.02■□□□□ 0.48
TPM1-228ENST00000560975 P3H4Q92791 437 aa18.02■□□□□ 0.48
TPM1-228ENST00000560975 EDEM3Q9BZQ6 932 aa18.02■□□□□ 0.48
TPM1-228ENST00000560975 MTFR1LQ9H019 292 aa18.02■□□□□ 0.48
TPM1-228ENST00000560975 PANK4Q9NVE7 773 aa18.02■□□□□ 0.48
TPM1-228ENST00000560975 STXBP3O00186 592 aa18.02■□□□□ 0.48
TPM1-228ENST00000560975 CYTH3O43739 400 aa18.02■□□□□ 0.48
TPM1-228ENST00000560975 LRRC63Q05C16 580 aa18.02■□□□□ 0.48
TPM1-228ENST00000560975 ADAT2Q7Z6V5 191 aaKnown RBP18.02■□□□□ 0.48
TPM1-228ENST00000560975 PIGBQ92521 554 aa18.02■□□□□ 0.48
TPM1-228ENST00000560975 HOOK2Q96ED9 719 aa18.02■□□□□ 0.48
TPM1-228ENST00000560975 COL4A3BPQ9Y5P4 624 aa18.02■□□□□ 0.48
TPM1-228ENST00000560975 KAT6BQ8WYB5 2073 aa18.02■□□□□ 0.47
TPM1-228ENST00000560975 COL18A1P39060 1754 aa18.02■□□□□ 0.47
TPM1-228ENST00000560975 KIF13AQ9H1H9 1805 aa18.02■□□□□ 0.47
TPM1-228ENST00000560975 TNS2Q63HR2 1409 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 VIMP08670 466 aaKnown RBP18.01■□□□□ 0.47
TPM1-228ENST00000560975 IFNAR2P48551 515 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 TFAP4Q01664 338 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 NELFCDQ8IXH7 590 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 UHMK1Q8TAS1 419 aaKnown RBP18.01■□□□□ 0.47
TPM1-228ENST00000560975 AGAP11Q8TF27 550 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 LARP4BQ92615 738 aaKnown RBP18.01■□□□□ 0.47
TPM1-228ENST00000560975 PBKQ96KB5 322 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.01■□□□□ 0.478e-7■■■□□ 15.2
TPM1-228ENST00000560975 PLCH1Q4KWH8 1693 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 A0A0G2JS52 829 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 DZIP3Q86Y13 1208 aaKnown RBP18.01■□□□□ 0.47
TPM1-228ENST00000560975 NUCKS1Q9H1E3 243 aaKnown RBP18.01■□□□□ 0.47
TPM1-228ENST00000560975 KCNG1Q9UIX4 513 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 C15orf41Q9Y2V0 281 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 MYH1P12882 1939 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 MYH4Q9Y623 1939 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 ACTN1P12814 892 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 NAPAP54920 295 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 PTK2Q05397 1052 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 SUSD4Q5VX71 490 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 EIF1ADQ8N9N8 165 aaKnown RBP18.01■□□□□ 0.47
TPM1-228ENST00000560975 ACTRT1Q8TDG2 376 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 DCP1AQ9NPI6 582 aaPredicted RBP18.01■□□□□ 0.47
TPM1-228ENST00000560975 ABCF3Q9NUQ8 709 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 AGAP1Q9UPQ3 857 aa18.01■□□□□ 0.47
TPM1-228ENST00000560975 COPB2P35606 906 aa18■□□□□ 0.47
TPM1-228ENST00000560975 SLC8A3P57103 927 aa18■□□□□ 0.47
TPM1-228ENST00000560975 KCNJ2P63252 427 aa18■□□□□ 0.47
TPM1-228ENST00000560975 NKX1-1Q15270 411 aaPredicted RBP18■□□□□ 0.47
TPM1-228ENST00000560975 COBLL1Q53SF7 1204 aa18■□□□□ 0.47
TPM1-228ENST00000560975 PEX26Q7Z412 305 aa18■□□□□ 0.47
TPM1-228ENST00000560975 LMBR1Q8WVP7 490 aa18■□□□□ 0.47
TPM1-228ENST00000560975 PRCCQ92733 491 aaPredicted RBP18■□□□□ 0.47
TPM1-228ENST00000560975 DDX12PQ92771 950 aa18■□□□□ 0.47
TPM1-228ENST00000560975 ZNF317Q96PQ6 595 aaPredicted RBP18■□□□□ 0.47
TPM1-228ENST00000560975 PNMA5Q96PV4 448 aa18■□□□□ 0.47
TPM1-228ENST00000560975 CNOT10Q9H9A5 744 aaKnown RBP18■□□□□ 0.47
TPM1-228ENST00000560975 EBF2Q9HAK2 575 aa18■□□□□ 0.47
TPM1-228ENST00000560975 KIF9Q9HAQ2 790 aa18■□□□□ 0.47
TPM1-228ENST00000560975 BARHL2Q9NY43 387 aa18■□□□□ 0.47
TPM1-228ENST00000560975 WDR3Q9UNX4 943 aaKnown RBP eCLIP18■□□□□ 0.47
TPM1-228ENST00000560975 CD2APQ9Y5K6 639 aa18■□□□□ 0.47
TPM1-228ENST00000560975 EIF4E1BA6NMX2 242 aaKnown RBP18■□□□□ 0.47
TPM1-228ENST00000560975 DIAPH2O60879 1101 aa18■□□□□ 0.47
TPM1-228ENST00000560975 EPS15P42566 896 aa18■□□□□ 0.47
TPM1-228ENST00000560975 NONOQ15233 471 aaKnown RBP eCLIP18■□□□□ 0.47
TPM1-228ENST00000560975 SYN2Q92777 582 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms