RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 KRT31Q15323 416 aa13.66□□□□□ -0.22
SYNM-203ENST00000560674 PDCD2Q16342 344 aaPredicted RBP13.66□□□□□ -0.22
SYNM-203ENST00000560674 LCORLQ8N3X6 602 aa13.66□□□□□ -0.22
SYNM-203ENST00000560674 FAM149B1Q96BN6 582 aa13.66□□□□□ -0.22
SYNM-203ENST00000560674 TTI1O43156 1089 aa13.66□□□□□ -0.22
SYNM-203ENST00000560674 ARL4AP40617 200 aa13.66□□□□□ -0.22
SYNM-203ENST00000560674 LLGL1Q15334 1064 aa13.66□□□□□ -0.22
SYNM-203ENST00000560674 TRIP13Q15645 432 aaPredicted RBP13.66□□□□□ -0.22
SYNM-203ENST00000560674 SPICE1Q8N0Z3 855 aa13.66□□□□□ -0.22
SYNM-203ENST00000560674 KCTD6Q8NC69 237 aa13.66□□□□□ -0.22
SYNM-203ENST00000560674 PUS7LQ9H0K6 701 aaKnown RBP13.66□□□□□ -0.22
SYNM-203ENST00000560674 OSBP2Q969R2 916 aa13.66□□□□□ -0.22
SYNM-203ENST00000560674 ATP6V1E2Q96A05 226 aa13.66□□□□□ -0.22
SYNM-203ENST00000560674 RPS6KC1Q96S38 1066 aa13.66□□□□□ -0.22
SYNM-203ENST00000560674 ATG3Q9NT62 314 aa13.66□□□□□ -0.22
SYNM-203ENST00000560674 MAGI2Q86UL8 1455 aa13.66□□□□□ -0.22
SYNM-203ENST00000560674 ATP1A3P13637 1013 aa13.66□□□□□ -0.22
SYNM-203ENST00000560674 MXI1P50539 228 aa13.66□□□□□ -0.22
SYNM-203ENST00000560674 YEATS2Q9ULM3 1422 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 CROCC2H7BZ55 1655 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 PRKAB2O43741 272 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 PLA2G4BP0C869 781 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 TBC1D10BQ4KMP7 808 aaPredicted RBP13.65□□□□□ -0.22
SYNM-203ENST00000560674 MIS18BP1Q6P0N0 1132 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 APOL6Q9BWW8 343 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 CALN1Q9BXU9 219 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 PARVGQ9HBI0 331 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 NFU1Q9UMS0 254 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 IQCB1Q15051 598 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 SARM1Q6SZW1 724 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 PACSIN2Q9UNF0 486 aaPredicted RBP13.65□□□□□ -0.22
SYNM-203ENST00000560674 PPME1Q9Y570 386 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 ARL6IP4Q66PJ3 421 aaKnown RBP13.65□□□□□ -0.22
SYNM-203ENST00000560674 PPP4R3CPQ6ZMV5 832 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 ZSWIM5Q9P217 1185 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 NUB1Q9Y5A7 615 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 ESRRAP11474 423 aaPredicted RBP13.65□□□□□ -0.22
SYNM-203ENST00000560674 PLS3P13797 630 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 SLC16A2P36021 539 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 LIFRP42702 1097 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 TMTC4Q5T4D3 741 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 PCGF5Q86SE9 256 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 CLASP1Q7Z460 1538 aa13.65□□□□□ -0.22
SYNM-203ENST00000560674 TRPA1O75762 1119 aa13.65□□□□□ -0.23
SYNM-203ENST00000560674 THOC5Q13769 683 aaKnown RBP13.65□□□□□ -0.23
SYNM-203ENST00000560674 COA7Q96BR5 231 aa13.65□□□□□ -0.23
SYNM-203ENST00000560674 CEP170P1Q96L14 293 aa13.65□□□□□ -0.23
SYNM-203ENST00000560674 CCDC188H7C350 402 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 INO80B-WBP1J3KQ70 363 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 USPL1Q5W0Q7 1092 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.64□□□□□ -0.23
SYNM-203ENST00000560674 PI4K2BQ8TCG2 481 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 CFAP36Q96G28 342 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 CCDC138Q96M89 665 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 INO80BQ9C086 356 aaPredicted RBP13.64□□□□□ -0.23
SYNM-203ENST00000560674 SNX25Q9H3E2 840 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 KANSL2Q9H9L4 492 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 MID2Q9UJV3 735 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 TMEM2Q9UHN6 1383 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 IQANK1A0A1B0GTG1 560 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 MAPK13O15264 365 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 CA4P22748 312 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 CDC37Q16543 378 aaPredicted RBP13.64□□□□□ -0.23
SYNM-203ENST00000560674 GLE1Q53GS7 698 aaKnown RBP13.64□□□□□ -0.23
SYNM-203ENST00000560674 CENPUQ71F23 418 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 MYLK4Q86YV6 388 aaPredicted RBP13.64□□□□□ -0.23
SYNM-203ENST00000560674 SYNMO15061 1565 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 WDR91A4D1P6 747 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 ZBTB24O43167 697 aaPredicted RBP13.64□□□□□ -0.23
SYNM-203ENST00000560674 ART3Q13508 389 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 NECTIN1Q15223 517 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 ZNF449Q6P9G9 518 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.64□□□□□ -0.23
SYNM-203ENST00000560674 PLAAQ9Y263 795 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 ZBTB17Q13105 803 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 BBS9Q3SYG4 887 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 RESP18Q5W5W9 173 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 ATG16L1Q676U5 607 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 SPOPLQ6IQ16 392 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 KRT80Q6KB66 452 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 ALKBH5Q6P6C2 394 aaKnown RBP13.64□□□□□ -0.23
SYNM-203ENST00000560674 RSRC2Q7L4I2 434 aaKnown RBP13.64□□□□□ -0.23
SYNM-203ENST00000560674 SERPINI1Q99574 410 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 AKT3Q9Y243 479 aa13.64□□□□□ -0.23
SYNM-203ENST00000560674 GSTA4O15217 222 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 HSPA8P11142 646 aaKnown RBP13.63□□□□□ -0.23
SYNM-203ENST00000560674 RWDD2BP57060 319 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 TFAMQ00059 246 aaKnown RBP13.63□□□□□ -0.23
SYNM-203ENST00000560674 TSTA3Q13630 321 aaPredicted RBP13.63□□□□□ -0.23
SYNM-203ENST00000560674 RHOT2Q8IXI1 618 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 DEPDC1BQ8WUY9 529 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 DIS3Q9Y2L1 958 aaKnown RBP13.63□□□□□ -0.23
SYNM-203ENST00000560674 PRPSAP2O60256 369 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 IL6STP40189 918 aaPredicted RBP13.63□□□□□ -0.23
SYNM-203ENST00000560674 CRKLP46109 303 aaKnown RBP13.63□□□□□ -0.23
SYNM-203ENST00000560674 FIS1Q9Y3D6 152 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 ADCY10Q96PN6 1610 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 IPO5O00410 1097 aaKnown RBP13.63□□□□□ -0.23
SYNM-203ENST00000560674 NUGGCQ68CJ6 796 aa13.63□□□□□ -0.23
SYNM-203ENST00000560674 MAML1Q92585 1016 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms