RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 NDUFAB1O14561 156 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 DTNBO60941 627 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 ALDH1A1P00352 501 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 CYP2D6P10635 497 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 IDEP14735 1019 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 TRIM21P19474 475 aaKnown RBP9.44□□□□□ -0.9
CCDC33-209ENST00000560565 CDC27P30260 824 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 SLC8A1P32418 973 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 GJA5P36382 358 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 NOVP48745 357 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 CDK8P49336 464 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 IRAK1P51617 712 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 ATP2C1P98194 919 aaPredicted RBP9.44□□□□□ -0.9
CCDC33-209ENST00000560565 NEDD9Q14511 834 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 IFI16Q16666 785 aaKnown RBP9.44□□□□□ -0.9
CCDC33-209ENST00000560565 CFAP221Q4G0U5 840 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 COBLL1Q53SF7 1204 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 CFAP58Q5T655 872 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 IFIT1BQ5T764 474 aaKnown RBP9.44□□□□□ -0.9
CCDC33-209ENST00000560565 KLHL10Q6JEL2 608 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 SH3BP5LQ7L8J4 393 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 PACS2Q86VP3 889 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 ERO1BQ86YB8 467 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 CD302Q8IX05 232 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 TRMT44Q8IYL2 757 aaKnown RBP9.44□□□□□ -0.9
CCDC33-209ENST00000560565 ZNF654Q8IZM8 581 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 MREGQ8N565 214 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 MB21D1Q8N884 522 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 ENAHQ8N8S7 591 aaPredicted RBP9.44□□□□□ -0.9
CCDC33-209ENST00000560565 FANCBQ8NB91 859 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 MAGEC3Q8TD91 643 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 AENQ8WTP8 325 aaKnown RBP9.44□□□□□ -0.9
CCDC33-209ENST00000560565 CPLX3Q8WVH0 158 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 NELFBQ8WX92 580 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 CNKSR2Q8WXI2 1034 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 PHKBQ93100 1093 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 OTUD5Q96G74 571 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 CCDC42Q96M95 316 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 AK8Q96MA6 479 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 JADE2Q9NQC1 790 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 SH3GLB2Q9NR46 395 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 LCMT1Q9UIC8 334 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 ZNF112Q9UJU3 913 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 CTNND2Q9UQB3 1225 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 SPDYE5A6NIY4 337 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 CES2O00748 559 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 MEFVO15553 781 aaPredicted RBP9.43□□□□□ -0.9
CCDC33-209ENST00000560565 TEX33O43247 280 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 RPN1P04843 607 aaKnown RBP9.43□□□□□ -0.9
CCDC33-209ENST00000560565 TSPY3P0CV98 308 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 TSPY8P0CW00 308 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 RASA1P20936 1047 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 KIF5BP33176 963 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 GGCXP38435 758 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 GTF2A2P52657 109 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 GNGT1P63211 74 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 TFAP4Q01664 338 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 MTMR3Q13615 1198 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 MTF1Q14872 753 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 TTC38Q5R3I4 469 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 LRIG3Q6UXM1 1119 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 KDM7AQ6ZMT4 941 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 RUFY4Q6ZNE9 571 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 IFNL1Q8IU54 200 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 PRPF38AQ8NAV1 312 aaKnown RBP9.43□□□□□ -0.9
CCDC33-209ENST00000560565 ACRBPQ8NEB7 543 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 SYMPKQ92797 1274 aaKnown RBP9.43□□□□□ -0.9
CCDC33-209ENST00000560565 PURBQ96QR8 312 aaKnown RBP9.43□□□□□ -0.9
CCDC33-209ENST00000560565 SLF1Q9BQI6 1058 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 EPC1Q9H2F5 836 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 CABP5Q9NP86 173 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 INCENPQ9NQS7 918 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 EXOC1Q9NV70 894 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 STIM2Q9P246 746 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 SAP30BPQ9UHR5 308 aaKnown RBP9.43□□□□□ -0.9
CCDC33-209ENST00000560565 HERC5Q9UII4 1024 aaKnown RBP9.43□□□□□ -0.9
CCDC33-209ENST00000560565 SNX12Q9UMY4 172 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 SNCAIPQ9Y6H5 919 aa9.43□□□□□ -0.9
CCDC33-209ENST00000560565 DOCK1Q14185 1865 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 GOLGA6L10A0A0M3HER8 536 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 TESPA1A2RU30 521 aaPredicted RBP9.42□□□□□ -0.9
CCDC33-209ENST00000560565 TBC1D12O60347 775 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 PHACTR2O75167 634 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 PRDM1O75626 825 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 PARP1P09874 1014 aaKnown RBP9.42□□□□□ -0.9
CCDC33-209ENST00000560565 PRR29P0C7W0 189 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 EZRP15311 586 aaKnown RBP9.42□□□□□ -0.9
CCDC33-209ENST00000560565 HNRNPH3P31942 346 aaKnown RBP9.42□□□□□ -0.9
CCDC33-209ENST00000560565 GNAQP50148 359 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 TOB1P50616 345 aaPredicted RBP9.42□□□□□ -0.9
CCDC33-209ENST00000560565 GYS2P54840 703 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 ERVK-24P63145 666 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 TNNC1P63316 161 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 MAP3K10Q02779 954 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 PPATQ06203 517 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 GOLGA8FQ08AF8 430 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 GOLGA8DPQ0D2H9 430 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 PPIL2Q13356 520 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 BIRC3Q13489 604 aa9.42□□□□□ -0.9
CCDC33-209ENST00000560565 PPP4R3AQ6IN85 833 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms