RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 MRPL42Q9Y6G3 142 aaKnown RBP5.7□□□□□ -1.5
TMOD3-207ENST00000560549 SYNMO15061 1565 aa5.7□□□□□ -1.5
TMOD3-207ENST00000560549 MED1Q15648 1581 aaPredicted RBP5.7□□□□□ -1.5
TMOD3-207ENST00000560549 ARHGAP31Q2M1Z3 1444 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 KTN1Q86UP2 1357 aaKnown RBP5.69□□□□□ -1.5
TMOD3-207ENST00000560549 SBNO2Q9Y2G9 1366 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 RPGRIP1LQ68CZ1 1315 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 NPHP3-ACAD11A0A0J9YXS1 232 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 ZC3H12DA2A288 527 aaKnown RBP5.69□□□□□ -1.5
TMOD3-207ENST00000560549 RFXAPO00287 272 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 INHBBP09529 407 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 PAMP19021 973 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 IGFBP6P24592 240 aaPredicted RBP5.69□□□□□ -1.5
TMOD3-207ENST00000560549 GRIA2P42262 883 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 MAPKAPK2P49137 400 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 TMEM62Q0P6H9 643 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 NFE2L2Q16236 605 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 SLC10A6Q3KNW5 377 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 DENND5AQ6IQ26 1287 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 LILRA6Q6PI73 481 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 LRP10Q7Z4F1 713 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 LILRB2Q8N423 598 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 KREMEN2Q8NCW0 462 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 MZB1Q8WU39 189 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 RNPC3Q96LT9 517 aaKnown RBP5.69□□□□□ -1.5
TMOD3-207ENST00000560549 KCNC2Q96PR1 638 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 BCAS3Q9H6U6 928 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 FBXL7Q9UJT9 491 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 TMA7Q9Y2S6 64 aaKnown RBP5.69□□□□□ -1.5
TMOD3-207ENST00000560549 ERVK-7P63135 1459 aa5.69□□□□□ -1.5
TMOD3-207ENST00000560549 PIK3C2GO75747 1445 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 MYO3AQ8NEV4 1616 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 A0A1W2PQ27 194 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 A0A1W2PQ64 194 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 A0A1W2PQC6 194 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 A0A1W2PQD8 194 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 MARCH6O60337 910 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 CYBBP04839 570 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 RASGRF1Q13972 1273 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 SV2CQ496J9 727 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 TCERG1LQ5VWI1 586 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 EGFLAMQ63HQ2 1017 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 ZC3H14Q6PJT7 736 aaKnown RBP5.68□□□□□ -1.5
TMOD3-207ENST00000560549 PAQR3Q6TCH7 311 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 SPATC1Q76KD6 591 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 TMEM151BQ8IW70 566 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 C1orf159Q96HA4 380 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 DNAJC7Q99615 494 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 CYP26B1Q9NR63 512 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 R3HCC1Q9Y3T6 440 aaKnown RBP5.68□□□□□ -1.5
TMOD3-207ENST00000560549 IRAK3Q9Y616 596 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 ZNF142P52746 1687 aaPredicted RBP5.68□□□□□ -1.5
TMOD3-207ENST00000560549 ADGRB1O14514 1584 aa5.68□□□□□ -1.5
TMOD3-207ENST00000560549 IQSEC2Q5JU85 1478 aa5.67□□□□□ -1.5
TMOD3-207ENST00000560549 U2SURPO15042 1029 aaKnown RBP5.67□□□□□ -1.5
TMOD3-207ENST00000560549 PDPK1O15530 556 aa5.67□□□□□ -1.5
TMOD3-207ENST00000560549 DIAPH1O60610 1272 aaKnown RBP5.67□□□□□ -1.5
TMOD3-207ENST00000560549 HOXA5P20719 270 aa5.67□□□□□ -1.5
TMOD3-207ENST00000560549 PPP2R1AP30153 589 aa5.67□□□□□ -1.5
TMOD3-207ENST00000560549 MC3RP41968 323 aa5.67□□□□□ -1.5
TMOD3-207ENST00000560549 PRR5P85299 388 aa5.67□□□□□ -1.5
TMOD3-207ENST00000560549 NR1I3Q14994 352 aa5.67□□□□□ -1.5
TMOD3-207ENST00000560549 POMZP3Q6PJE2 187 aa5.67□□□□□ -1.5
TMOD3-207ENST00000560549 FAM129CQ86XR2 697 aa5.67□□□□□ -1.5
TMOD3-207ENST00000560549 MARCH10Q8NA82 808 aaPredicted RBP5.67□□□□□ -1.5
TMOD3-207ENST00000560549 PLEKHO2Q8TD55 490 aa5.67□□□□□ -1.5
TMOD3-207ENST00000560549 C20orf173Q96LM9 149 aa5.67□□□□□ -1.5
TMOD3-207ENST00000560549 MMP19Q99542 508 aa5.67□□□□□ -1.5
TMOD3-207ENST00000560549 SIT1Q9Y3P8 196 aa5.67□□□□□ -1.5
TMOD3-207ENST00000560549 CEP170BQ9Y4F5 1589 aaPredicted RBP5.67□□□□□ -1.5
TMOD3-207ENST00000560549 IFT172Q9UG01 1749 aa5.67□□□□□ -1.5
TMOD3-207ENST00000560549 TNRQ92752 1358 aa5.67□□□□□ -1.5
TMOD3-207ENST00000560549 ZNF335Q9H4Z2 1342 aaPredicted RBP5.66□□□□□ -1.5
TMOD3-207ENST00000560549 NLRP1Q9C000 1473 aa5.66□□□□□ -1.5
TMOD3-207ENST00000560549 PIK3C2BO00750 1634 aa5.66□□□□□ -1.5
TMOD3-207ENST00000560549 F8W031 263 aaPredicted RBP5.66□□□□□ -1.5
TMOD3-207ENST00000560549 NOP56O00567 594 aaKnown RBP5.66□□□□□ -1.5
TMOD3-207ENST00000560549 TRIM13O60858 407 aa5.66□□□□□ -1.5
TMOD3-207ENST00000560549 LIMS1P48059 325 aa5.66□□□□□ -1.5
TMOD3-207ENST00000560549 CAP1Q01518 475 aa5.66□□□□□ -1.5
TMOD3-207ENST00000560549 NOL8Q76FK4 1167 aaKnown RBP5.66□□□□□ -1.5
TMOD3-207ENST00000560549 NLRP10Q86W26 655 aa5.66□□□□□ -1.5
TMOD3-207ENST00000560549 LZTR1Q8N653 840 aa5.66□□□□□ -1.5
TMOD3-207ENST00000560549 JMYQ8N9B5 988 aa5.66□□□□□ -1.5
TMOD3-207ENST00000560549 MRFAP1L1Q96HT8 127 aa5.66□□□□□ -1.5
TMOD3-207ENST00000560549 PARD6AQ9NPB6 346 aa5.66□□□□□ -1.5
TMOD3-207ENST00000560549 SLC52A1Q9NWF4 448 aa5.66□□□□□ -1.5
TMOD3-207ENST00000560549 SMG6Q86US8 1419 aaKnown RBP5.66□□□□□ -1.5
TMOD3-207ENST00000560549 KIAA1210Q9ULL0 1709 aa5.66□□□□□ -1.5
TMOD3-207ENST00000560549 EIF3AQ14152 1382 aaKnown RBP5.66□□□□□ -1.5
TMOD3-207ENST00000560549 NEXMIFQ5QGS0 1516 aa5.66□□□□□ -1.5
TMOD3-207ENST00000560549 A2ML1A8K2U0 1454 aa5.66□□□□□ -1.5
TMOD3-207ENST00000560549 CENPJQ9HC77 1338 aaPredicted RBP5.66□□□□□ -1.5
TMOD3-207ENST00000560549 BUB1BO60566 1050 aaPredicted RBP5.65□□□□□ -1.5
TMOD3-207ENST00000560549 SCG5P05408 212 aa5.65□□□□□ -1.5
TMOD3-207ENST00000560549 NAT2P11245 290 aa5.65□□□□□ -1.5
TMOD3-207ENST00000560549 LCP1P13796 627 aa5.65□□□□□ -1.5
TMOD3-207ENST00000560549 ATF2P15336 505 aa5.65□□□□□ -1.5
TMOD3-207ENST00000560549 FPR2P25090 351 aa5.65□□□□□ -1.5
TMOD3-207ENST00000560549 GFRA1P56159 465 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms