RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ZNF76P36508 570 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 ARHGAP4P98171 946 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 TRIM71Q2Q1W2 868 aaKnown RBP16.08■□□□□ 0.16
TPM1-223ENST00000560445 ADCK5Q3MIX3 580 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 NIPA1Q7RTP0 329 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 RASEFQ8IZ41 740 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 IL27Q8NEV9 243 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 CCDC148Q8NFR7 591 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 VWCEQ96DN2 955 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 MXRA8Q9BRK3 442 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 C6orf50Q9HD87 102 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 BRPF3Q9ULD4 1205 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 NFASCO94856 1347 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 NID2Q14112 1375 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 SMCO2A6NFE2 343 aa16.07■□□□□ 0.16
TPM1-223ENST00000560445 RRN3P2A6NIE6 340 aa16.07■□□□□ 0.16
TPM1-223ENST00000560445 NBNO60934 754 aa16.07■□□□□ 0.16
TPM1-223ENST00000560445 SCG2P13521 617 aa16.07■□□□□ 0.16
TPM1-223ENST00000560445 SREBF1P36956 1147 aa16.07■□□□□ 0.16
TPM1-223ENST00000560445 SLC26A2P50443 739 aa16.07■□□□□ 0.16
TPM1-223ENST00000560445 PPFIA1Q13136 1202 aa16.07■□□□□ 0.16
TPM1-223ENST00000560445 PFKFB3Q16875 520 aaPredicted RBP16.07■□□□□ 0.16
TPM1-223ENST00000560445 CEP55Q53EZ4 464 aa16.07■□□□□ 0.16
TPM1-223ENST00000560445 Q6ZUG5 572 aa16.07■□□□□ 0.16
TPM1-223ENST00000560445 ATXN2LQ8WWM7 1075 aaKnown RBP16.07■□□□□ 0.16
TPM1-223ENST00000560445 BRF1Q92994 677 aa16.07■□□□□ 0.16
TPM1-223ENST00000560445 TCEANC2Q96MN5 208 aa16.07■□□□□ 0.16
TPM1-223ENST00000560445 RAD9AQ99638 391 aa16.07■□□□□ 0.16
TPM1-223ENST00000560445 ANO3Q9BYT9 981 aa16.07■□□□□ 0.16
TPM1-223ENST00000560445 RNPEPQ9H4A4 650 aa16.07■□□□□ 0.16
TPM1-223ENST00000560445 THEGQ9P2T0 379 aa16.07■□□□□ 0.16
TPM1-223ENST00000560445 SLC9A2Q9UBY0 812 aa16.07■□□□□ 0.16
TPM1-223ENST00000560445 TET1Q8NFU7 2136 aa16.06■□□□□ 0.16
TPM1-223ENST00000560445 STXBP3O00186 592 aa16.06■□□□□ 0.16
TPM1-223ENST00000560445 TREHO43280 583 aa16.06■□□□□ 0.16
TPM1-223ENST00000560445 GJB5O95377 273 aa16.06■□□□□ 0.16
TPM1-223ENST00000560445 RPS6KB1P23443 525 aa16.06■□□□□ 0.16
TPM1-223ENST00000560445 SETQ01105 290 aaPredicted RBP16.06■□□□□ 0.16
TPM1-223ENST00000560445 FUT2Q10981 343 aa16.06■□□□□ 0.16
TPM1-223ENST00000560445 AAK1Q2M2I8 961 aa16.06■□□□□ 0.16
TPM1-223ENST00000560445 ERICH6BQ5W0A0 696 aa16.06■□□□□ 0.16
TPM1-223ENST00000560445 CPLX2Q6PUV4 134 aaKnown RBP16.06■□□□□ 0.16
TPM1-223ENST00000560445 RPAINQ86UA6 219 aa16.06■□□□□ 0.16
TPM1-223ENST00000560445 TRIM22Q8IYM9 498 aa16.06■□□□□ 0.16
TPM1-223ENST00000560445 REXO1Q8N1G1 1221 aaKnown RBP16.06■□□□□ 0.16
TPM1-223ENST00000560445 LMBR1Q8WVP7 490 aa16.06■□□□□ 0.16
TPM1-223ENST00000560445 KCNH7Q9NS40 1196 aa16.06■□□□□ 0.16
TPM1-223ENST00000560445 SETD4Q9NVD3 440 aa16.06■□□□□ 0.16
TPM1-223ENST00000560445 SNX14Q9Y5W7 946 aa16.06■□□□□ 0.16
TPM1-223ENST00000560445 A0A0C4DFX4 3053 aa16.05■□□□□ 0.16
TPM1-223ENST00000560445 M0QZ92 97 aa16.05■□□□□ 0.16
TPM1-223ENST00000560445 ZNF200P98182 395 aaPredicted RBP16.05■□□□□ 0.16
TPM1-223ENST00000560445 PLEKHG4Q58EX7 1191 aa16.05■□□□□ 0.16
TPM1-223ENST00000560445 TJAP1Q5JTD0 557 aa16.05■□□□□ 0.16
TPM1-223ENST00000560445 FAM160B1Q5W0V3 765 aa16.05■□□□□ 0.16
TPM1-223ENST00000560445 TRIM50Q86XT4 487 aa16.05■□□□□ 0.16
TPM1-223ENST00000560445 FAM177A1Q8N128 213 aaPredicted RBP16.05■□□□□ 0.16
TPM1-223ENST00000560445 RNF26Q9BY78 433 aaPredicted RBP16.05■□□□□ 0.16
TPM1-223ENST00000560445 C22orf23Q9BZE7 217 aa16.05■□□□□ 0.16
TPM1-223ENST00000560445 TUBE1Q9UJT0 475 aa16.05■□□□□ 0.16
TPM1-223ENST00000560445 INSL6Q9Y581 213 aa16.05■□□□□ 0.16
TPM1-223ENST00000560445 CDH23Q9H251 3354 aa16.05■□□□□ 0.16
TPM1-223ENST00000560445 DOCK5Q9H7D0 1870 aa16.05■□□□□ 0.16
TPM1-223ENST00000560445 PRPF3O43395 683 aaKnown RBP16.04■□□□□ 0.16
TPM1-223ENST00000560445 MYOGP15173 224 aa16.04■□□□□ 0.16
TPM1-223ENST00000560445 POU3F3P20264 500 aaPredicted RBP16.04■□□□□ 0.16
TPM1-223ENST00000560445 TAP1Q03518 808 aa16.04■□□□□ 0.16
TPM1-223ENST00000560445 APOBRQ0VD83 1088 aa16.04■□□□□ 0.16
TPM1-223ENST00000560445 GRIK4Q16099 956 aa16.04■□□□□ 0.16
TPM1-223ENST00000560445 FAM26DQ5JW98 314 aa16.04■□□□□ 0.16
TPM1-223ENST00000560445 TRAF7Q6Q0C0 670 aa16.04■□□□□ 0.16
TPM1-223ENST00000560445 SAMD11Q96NU1 681 aa16.04■□□□□ 0.16
TPM1-223ENST00000560445 AGXT2Q9BYV1 514 aa16.04■□□□□ 0.16
TPM1-223ENST00000560445 ZMYND12Q9H0C1 365 aa16.04■□□□□ 0.16
TPM1-223ENST00000560445 LMCD1Q9NZU5 365 aa16.04■□□□□ 0.16
TPM1-223ENST00000560445 TRPC6Q9Y210 931 aa16.04■□□□□ 0.16
TPM1-223ENST00000560445 CYP46A1Q9Y6A2 500 aa16.04■□□□□ 0.16
TPM1-223ENST00000560445 MEIS1O00470 390 aa16.03■□□□□ 0.16
TPM1-223ENST00000560445 ATP9AO75110 1047 aa16.03■□□□□ 0.16
TPM1-223ENST00000560445 CENPBP07199 599 aaPredicted RBP16.03■□□□□ 0.16
TPM1-223ENST00000560445 COL9A3Q14050 684 aaPredicted RBP16.03■□□□□ 0.16
TPM1-223ENST00000560445 IER5Q5VY09 327 aa16.03■□□□□ 0.16
TPM1-223ENST00000560445 PLPPR4Q7Z2D5 763 aa16.03■□□□□ 0.16
TPM1-223ENST00000560445 USP38Q8NB14 1042 aa16.03■□□□□ 0.16
TPM1-223ENST00000560445 DBF4BQ8NFT6 615 aa16.03■□□□□ 0.16
TPM1-223ENST00000560445 ARNTL2Q8WYA1 636 aa16.03■□□□□ 0.16
TPM1-223ENST00000560445 TGS1Q96RS0 853 aaKnown RBP16.03■□□□□ 0.16
TPM1-223ENST00000560445 TM6SF1Q9BZW5 370 aa16.03■□□□□ 0.16
TPM1-223ENST00000560445 SH3GLB2Q9NR46 395 aa16.03■□□□□ 0.16
TPM1-223ENST00000560445 TBC1D22BQ9NU19 505 aa16.03■□□□□ 0.16
TPM1-223ENST00000560445 PKD2L1Q9P0L9 805 aa16.03■□□□□ 0.16
TPM1-223ENST00000560445 GSTTP1A0A1W2PQM5 241 aa16.02■□□□□ 0.16
TPM1-223ENST00000560445 CPLX1O14810 134 aa16.02■□□□□ 0.16
TPM1-223ENST00000560445 CTSHP09668 335 aa16.02■□□□□ 0.16
TPM1-223ENST00000560445 IFNAR1P17181 557 aa16.02■□□□□ 0.16
TPM1-223ENST00000560445 CDC27P30260 824 aa16.02■□□□□ 0.16
TPM1-223ENST00000560445 ADD1P35611 737 aaKnown RBP16.02■□□□□ 0.16
TPM1-223ENST00000560445 CLK2P49760 499 aaKnown RBP16.02■□□□□ 0.16
TPM1-223ENST00000560445 STAT5BP51692 787 aa16.02■□□□□ 0.16
TPM1-223ENST00000560445 EVCP57679 992 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms