RNA–Protein interactions for RNA: ENST00000560427.1

NEDD8-208, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-208ENST00000560427 CLTBP09497 229 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 SFNP31947 248 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 PSEN2P49810 448 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 SLC26A2P50443 739 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 PSMC6P62333 389 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 SP4Q02446 784 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 TLE2Q04725 743 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 KIAA0753Q2KHM9 967 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 NBPF20Q3BBV1 942 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 LRCH2Q5VUJ6 765 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 LARP1BQ659C4 914 aaKnown RBP14.71□□□□□ -0.05
NEDD8-208ENST00000560427 MIS18BP1Q6P0N0 1132 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 C7orf31Q8N865 590 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 RDM1Q8NG50 284 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 TNPO1Q92973 898 aaKnown RBP14.71□□□□□ -0.05
NEDD8-208ENST00000560427 TEKT3Q9BXF9 490 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 SMARCAD1Q9H4L7 1026 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 TUT1Q9H6E5 874 aaKnown RBP14.71□□□□□ -0.05
NEDD8-208ENST00000560427 AZI2Q9H6S1 392 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 KCNMB3Q9NPA1 279 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 ERAP1Q9NZ08 941 aa14.71□□□□□ -0.05
NEDD8-208ENST00000560427 NOL7Q9UMY1 257 aaKnown RBP14.71□□□□□ -0.05
NEDD8-208ENST00000560427 MKI67P46013 3256 aaKnown RBP14.7□□□□□ -0.06
NEDD8-208ENST00000560427 PDE4DIPQ5VU43 2346 aa14.7□□□□□ -0.06
NEDD8-208ENST00000560427 IGKV6D-21A0A0A0MT36 114 aa14.7□□□□□ -0.06
NEDD8-208ENST00000560427 GSTTP1A0A1W2PQM5 241 aa14.7□□□□□ -0.06
NEDD8-208ENST00000560427 FAM205CA6NFA0 338 aa14.7□□□□□ -0.06
NEDD8-208ENST00000560427 WDR64B1ANS9 1081 aa14.7□□□□□ -0.06
NEDD8-208ENST00000560427 SLC37A4O43826 429 aa14.7□□□□□ -0.06
NEDD8-208ENST00000560427 CCNE2O96020 404 aa14.7□□□□□ -0.06
NEDD8-208ENST00000560427 PDIA4P13667 645 aaKnown RBP14.7□□□□□ -0.06
NEDD8-208ENST00000560427 JAK3P52333 1124 aa14.7□□□□□ -0.06
NEDD8-208ENST00000560427 PRPF38BQ5VTL8 546 aaKnown RBP14.7□□□□□ -0.06
NEDD8-208ENST00000560427 SLFN12Q8IYM2 578 aa14.7□□□□□ -0.06
NEDD8-208ENST00000560427 AFAP1L1Q8TED9 768 aa14.7□□□□□ -0.06
NEDD8-208ENST00000560427 PDLIM7Q9NR12 457 aa14.7□□□□□ -0.06
NEDD8-208ENST00000560427 KIAA0355O15063 1070 aa14.69□□□□□ -0.06
NEDD8-208ENST00000560427 NEMFO60524 1076 aa14.69□□□□□ -0.06
NEDD8-208ENST00000560427 PSMD10O75832 226 aa14.69□□□□□ -0.06
NEDD8-208ENST00000560427 CD4P01730 458 aa14.69□□□□□ -0.06
NEDD8-208ENST00000560427 PSAPP07602 524 aa14.69□□□□□ -0.06
NEDD8-208ENST00000560427 FAAP100Q0VG06 881 aa14.69□□□□□ -0.06
NEDD8-208ENST00000560427 FAM47CQ5HY64 1035 aa14.69□□□□□ -0.06
NEDD8-208ENST00000560427 FAM160B1Q5W0V3 765 aa14.69□□□□□ -0.06
NEDD8-208ENST00000560427 ABHD15Q6UXT9 468 aa14.69□□□□□ -0.06
NEDD8-208ENST00000560427 PLPPR4Q7Z2D5 763 aa14.69□□□□□ -0.06
NEDD8-208ENST00000560427 GLG1Q92896 1179 aa14.69□□□□□ -0.06
NEDD8-208ENST00000560427 GTF2IRD1Q9UHL9 959 aa14.69□□□□□ -0.06
NEDD8-208ENST00000560427 PCDHA10Q9Y5I2 948 aa14.69□□□□□ -0.06
NEDD8-208ENST00000560427 KIF28PB7ZC32 967 aa14.68□□□□□ -0.06
NEDD8-208ENST00000560427 DDX39AO00148 427 aaKnown RBP14.68□□□□□ -0.06
NEDD8-208ENST00000560427 BAG4O95429 457 aaKnown RBP14.68□□□□□ -0.06
NEDD8-208ENST00000560427 HSP90AA1P07900 732 aaKnown RBP14.68□□□□□ -0.06
NEDD8-208ENST00000560427 GNAT1P11488 350 aa14.68□□□□□ -0.06
NEDD8-208ENST00000560427 HOXC8P31273 242 aa14.68□□□□□ -0.06
NEDD8-208ENST00000560427 STAT5BP51692 787 aa14.68□□□□□ -0.06
NEDD8-208ENST00000560427 PPP2R5CQ13362 524 aa14.68□□□□□ -0.06
NEDD8-208ENST00000560427 RILPL1Q5EBL4 403 aa14.68□□□□□ -0.06
NEDD8-208ENST00000560427 UTP14CQ5TAP6 766 aaKnown RBP14.68□□□□□ -0.06
NEDD8-208ENST00000560427 B3GNT9Q6UX72 402 aa14.68□□□□□ -0.06
NEDD8-208ENST00000560427 TRIM50Q86XT4 487 aa14.68□□□□□ -0.06
NEDD8-208ENST00000560427 POTEDQ86YR6 584 aa14.68□□□□□ -0.06
NEDD8-208ENST00000560427 TBX21Q9UL17 535 aa14.68□□□□□ -0.06
NEDD8-208ENST00000560427 NRCAMQ92823 1304 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 DOCK5Q9H7D0 1870 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 H0YGN5 161 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 MARCH6O60337 910 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 B4GALT4O60513 344 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 CALCRLQ16602 461 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 TTC38Q5R3I4 469 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 MCTP1Q6DN14 999 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 BRAPQ7Z569 592 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 HAS1Q92839 578 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 PCYT2Q99447 389 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 UNC45AQ9H3U1 944 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 PRDM5Q9NQX1 630 aaPredicted RBP14.67□□□□□ -0.06
NEDD8-208ENST00000560427 ZNF302Q9NR11 478 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 TMEM39AQ9NV64 488 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 HDAC6Q9UBN7 1215 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 NOD1Q9Y239 953 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 TELO2Q9Y4R8 837 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 SAMM50Q9Y512 469 aa14.67□□□□□ -0.06
NEDD8-208ENST00000560427 IGSF9BQ9UPX0 1349 aa14.66□□□□□ -0.06
NEDD8-208ENST00000560427 C17orf102A2RUQ5 167 aa14.66□□□□□ -0.06
NEDD8-208ENST00000560427 BACH1O14867 736 aa14.66□□□□□ -0.06
NEDD8-208ENST00000560427 SMIM10L2AP0DMW4 78 aa14.66□□□□□ -0.06
NEDD8-208ENST00000560427 SMIM10L2BP0DMW5 78 aa14.66□□□□□ -0.06
NEDD8-208ENST00000560427 PTGISQ16647 500 aa14.66□□□□□ -0.06
NEDD8-208ENST00000560427 CCDC60Q8IWA6 550 aaPredicted RBP14.66□□□□□ -0.06
NEDD8-208ENST00000560427 CCDC155Q8N6L0 562 aa14.66□□□□□ -0.06
NEDD8-208ENST00000560427 CAGE1Q8TC20 777 aa14.66□□□□□ -0.06
NEDD8-208ENST00000560427 ATP6V0A1Q93050 837 aa14.66□□□□□ -0.06
NEDD8-208ENST00000560427 FAM167AQ96KS9 214 aa14.66□□□□□ -0.06
NEDD8-208ENST00000560427 DISC1Q9NRI5 854 aa14.66□□□□□ -0.06
NEDD8-208ENST00000560427 TRMT13Q9NUP7 481 aaKnown RBP14.66□□□□□ -0.06
NEDD8-208ENST00000560427 VAV3Q9UKW4 847 aa14.66□□□□□ -0.06
NEDD8-208ENST00000560427 ZMYND8Q9ULU4 1186 aaPredicted RBP14.66□□□□□ -0.06
NEDD8-208ENST00000560427 MAFBQ9Y5Q3 323 aaPredicted RBP14.66□□□□□ -0.06
NEDD8-208ENST00000560427 VPS37CA5D8V6 355 aaPredicted RBP14.65□□□□□ -0.06
NEDD8-208ENST00000560427 LAD1O00515 517 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms