RNA–Protein interactions for RNA: ENST00000560239.1

AC048382.2-201, humanhuman

TSL 2 BASIC

Gene AC048382.2, Length 492 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048382.2-201ENST00000560239 HOXD8P13378 290 aaPredicted RBP6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 RRP1P56182 461 aaKnown RBP6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 ARHGAP1Q07960 439 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 STXBP2Q15833 593 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 PTPROQ16827 1216 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 TIGD5Q53EQ6 642 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 TSHZ3Q63HK5 1081 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 KRT40Q6A162 431 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 GDF6Q6KF10 455 aaPredicted RBP6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 PPP1R18Q6NYC8 613 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 DGKHQ86XP1 1220 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 FAM178BQ8IXR5 827 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 GJD3Q8N144 294 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 SAMD3Q8N6K7 520 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 C7orf31Q8N865 590 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 PPTC7Q8NI37 304 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 GDPD5Q8WTR4 605 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 AFG1LQ8WV93 481 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 MRPL38Q96DV4 380 aaKnown RBP6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 CTAGE1Q96RT6 745 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 CRBNQ96SW2 442 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 SUGCTQ9HAC7 445 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 C11orf16Q9NQ32 467 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 TOMM22Q9NS69 142 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 MAP3K20Q9NYL2 800 aaKnown RBP6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 PRKAG3Q9UGI9 489 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 MTMR7Q9Y216 660 aa6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 FRMPD2Q68DX3 1309 aaPredicted RBP6.96□□□□□ -1.3
AC048382.2-201ENST00000560239 PIEZO1Q92508 2521 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 LCHNA4D1U4 455 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 LINC01553A4QN01 128 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 RNF223E7ERA6 249 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 HAS3O00219 553 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 NCK2O43639 380 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 NBNO60934 754 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 LGR5O75473 907 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 EIF3JO75822 258 aaKnown RBP6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 ARIH2O95376 493 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 FGAP02671 866 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 AMHP03971 560 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 MFAP1P55081 439 aaKnown RBP6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 DEFB103AP81534 67 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 HTRA4P83105 476 aaPredicted RBP6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 LAMC2Q13753 1193 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 GPNMBQ14956 572 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 MCMDC2Q4G0Z9 681 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 ASPRV1Q53RT3 343 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 RRP12Q5JTH9 1297 aaKnown RBP6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 MFSD6Q6ZSS7 791 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 RASGRP2Q7LDG7 609 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 IQCA1Q86XH1 822 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 LRRN4Q8WUT4 740 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 DHX38Q92620 1227 aaKnown RBP6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 KAT2BQ92831 832 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 COPS5Q92905 334 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 CHMP4CQ96CF2 233 aa6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 FCF1Q9Y324 198 aaKnown RBP6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 MRPL11Q9Y3B7 192 aaKnown RBP6.95□□□□□ -1.3
AC048382.2-201ENST00000560239 DCXO43602 365 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 PPFIA4O75335 1185 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 TGFB3P10600 412 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 HSPD1P10809 573 aaKnown RBP6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 KCNA5P22460 613 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 GHRHRQ02643 423 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 TRAF1Q13077 416 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 MCM6Q14566 821 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 COL19A1Q14993 1142 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 CDC37Q16543 378 aaPredicted RBP6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 KIAA0753Q2KHM9 967 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 USH1GQ495M9 461 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 PTCRAQ6ISU1 281 aaPredicted RBP6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 SEPT14Q6ZU15 432 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 NEK9Q8TD19 979 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 SYTL5Q8TDW5 730 aaPredicted RBP6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 ESR2Q92731 530 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 APBB2Q92870 758 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 PABPC5Q96DU9 382 aaKnown RBP6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 IPO9Q96P70 1041 aaKnown RBP6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 RMDN3Q96TC7 470 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 UPF3BQ9BZI7 483 aaKnown RBP6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 HDAC6Q9UBN7 1215 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 DDX41Q9UJV9 622 aaKnown RBP6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 RWDD3Q9Y3V2 267 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 MRVI1Q9Y6F6 885 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 SALL3Q9BXA9 1300 aa6.94□□□□□ -1.3
AC048382.2-201ENST00000560239 H3BNC9 293 aa6.93□□□□□ -1.3
AC048382.2-201ENST00000560239 NR3C2P08235 984 aa6.93□□□□□ -1.3
AC048382.2-201ENST00000560239 HOXC8P31273 242 aa6.93□□□□□ -1.3
AC048382.2-201ENST00000560239 CTHP32929 405 aa6.93□□□□□ -1.3
AC048382.2-201ENST00000560239 CHMP4BP1P59074 171 aa6.93□□□□□ -1.3
AC048382.2-201ENST00000560239 LY6KQ17RY6 165 aa6.93□□□□□ -1.3
AC048382.2-201ENST00000560239 TRIM71Q2Q1W2 868 aaKnown RBP6.93□□□□□ -1.3
AC048382.2-201ENST00000560239 PLEKHG4Q58EX7 1191 aa6.93□□□□□ -1.3
AC048382.2-201ENST00000560239 ZNF618Q5T7W0 954 aa6.93□□□□□ -1.3
AC048382.2-201ENST00000560239 C20orf194Q5TEA3 1177 aa6.93□□□□□ -1.3
AC048382.2-201ENST00000560239 VPS53Q5VIR6 699 aa6.93□□□□□ -1.3
AC048382.2-201ENST00000560239 ARHGEF16Q5VV41 709 aa6.93□□□□□ -1.3
AC048382.2-201ENST00000560239 TRAF7Q6Q0C0 670 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms