RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 NID1P14543 1247 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 SYT1P21579 422 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 HNRNPH2P55795 449 aaKnown RBP6.02□□□□□ -1.45
TPM1-222ENST00000560131 GSDMDP57764 484 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 MCL1Q07820 350 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 STRN3Q13033 797 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 AUHQ13825 339 aaKnown RBP6.02□□□□□ -1.45
TPM1-222ENST00000560131 COL9A3Q14050 684 aaPredicted RBP6.02□□□□□ -1.45
TPM1-222ENST00000560131 PPP2R5AQ15172 486 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 PCBP1Q15365 356 aaKnown RBP eCLIP6.02□□□□□ -1.45
TPM1-222ENST00000560131 PTPN14Q15678 1187 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 TPD52L1Q16890 204 aaPredicted RBP6.02□□□□□ -1.45
TPM1-222ENST00000560131 CCDC93Q567U6 631 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 NUTM2GQ5VZR2 741 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 FBXO38Q6PIJ6 1188 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 BRAPQ7Z569 592 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 MFSD2AQ8NA29 543 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 SMG8Q8ND04 991 aaKnown RBP6.02□□□□□ -1.45
TPM1-222ENST00000560131 PPP1R13LQ8WUF5 828 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 RTF1Q92541 710 aaKnown RBP6.02□□□□□ -1.45
TPM1-222ENST00000560131 PTPRN2Q92932 1015 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 VWCEQ96DN2 955 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 CCDC140Q96MF4 163 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 ASPSCR1Q9BZE9 553 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 SCAND2PQ9GZW5 306 aaPredicted RBP6.02□□□□□ -1.45
TPM1-222ENST00000560131 MTFR1LQ9H019 292 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 OSBPL5Q9H0X9 879 aaPredicted RBP6.02□□□□□ -1.45
TPM1-222ENST00000560131 NUP62CLQ9H1M0 184 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 ALDH8A1Q9H2A2 487 aaPredicted RBP6.02□□□□□ -1.45
TPM1-222ENST00000560131 SLC52A2Q9HAB3 445 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 SUGCTQ9HAC7 445 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 GP6Q9HCN6 339 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 SSU72Q9NP77 194 aaKnown RBP6.02□□□□□ -1.45
TPM1-222ENST00000560131 ARGLU1Q9NWB6 273 aaPredicted RBP6.02□□□□□ -1.45
TPM1-222ENST00000560131 SLC5A4Q9NY91 659 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 TERF2IPQ9NYB0 399 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 IMPACTQ9P2X3 320 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 ZNF215Q9UL58 517 aaPredicted RBP6.02□□□□□ -1.45
TPM1-222ENST00000560131 LIMCH1Q9UPQ0 1083 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 CNPY2Q9Y2B0 182 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 TNPO3Q9Y5L0 923 aaKnown RBP6.02□□□□□ -1.45
TPM1-222ENST00000560131 FHOD1Q9Y613 1164 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 PXDNLA1KZ92 1463 aa6.02□□□□□ -1.45
TPM1-222ENST00000560131 SOS1Q07889 1333 aaPredicted RBP6.01□□□□□ -1.45
TPM1-222ENST00000560131 NPHP3Q7Z494 1330 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.01□□□□□ -1.45
TPM1-222ENST00000560131 FYB1O15117 783 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 CTAGE5O15320 804 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 OPA1O60313 960 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 BRINP1O60477 761 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 RNGTTO60942 597 aaKnown RBP6.01□□□□□ -1.45
TPM1-222ENST00000560131 ADH5P11766 374 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 ITGA4P13612 1032 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 TAL1P17542 331 aaPredicted RBP6.01□□□□□ -1.45
TPM1-222ENST00000560131 PDCP20941 246 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 HOXC12P31275 282 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 FLT3P36888 993 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 NOP2P46087 812 aaKnown RBP6.01□□□□□ -1.45
TPM1-222ENST00000560131 RNF4P78317 190 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 KRT85P78386 507 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 SOX4Q06945 474 aaPredicted RBP6.01□□□□□ -1.45
TPM1-222ENST00000560131 GORABQ5T7V8 394 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 UBE3DQ7Z6J8 389 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 WDR75Q8IWA0 830 aaKnown RBP6.01□□□□□ -1.45
TPM1-222ENST00000560131 LRRC8AQ8IWT6 810 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 CCAR2Q8N163 923 aaKnown RBP6.01□□□□□ -1.45
TPM1-222ENST00000560131 CACTINQ8WUQ7 758 aaKnown RBP6.01□□□□□ -1.45
TPM1-222ENST00000560131 KCTD13Q8WZ19 329 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 ISL2Q96A47 359 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 EXOC4Q96A65 974 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 C16orf45Q96MC5 204 aaPredicted RBP6.01□□□□□ -1.45
TPM1-222ENST00000560131 CLSTN2Q9H4D0 955 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 GSX1Q9H4S2 264 aaPredicted RBP6.01□□□□□ -1.45
TPM1-222ENST00000560131 PIDD1Q9HB75 910 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 ZNF446Q9NWS9 450 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 AP4E1Q9UPM8 1137 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 MTMR6Q9Y217 621 aa6.01□□□□□ -1.45
TPM1-222ENST00000560131 DIS3Q9Y2L1 958 aaKnown RBP6.01□□□□□ -1.45
TPM1-222ENST00000560131 MAP2P11137 1827 aaKnown RBP6.01□□□□□ -1.45
TPM1-222ENST00000560131 DLC1Q96QB1 1528 aa6□□□□□ -1.45
TPM1-222ENST00000560131 VGLL3A8MV65 326 aa6□□□□□ -1.45
TPM1-222ENST00000560131 SHOXO15266 292 aa6□□□□□ -1.45
TPM1-222ENST00000560131 GPR39O43194 453 aa6□□□□□ -1.45
TPM1-222ENST00000560131 LRIG2O94898 1065 aa6□□□□□ -1.45
TPM1-222ENST00000560131 IVLP07476 585 aa6□□□□□ -1.45
TPM1-222ENST00000560131 PNMA6AP0CW24 399 aaPredicted RBP6□□□□□ -1.45
TPM1-222ENST00000560131 CASQ1P31415 396 aa6□□□□□ -1.45
TPM1-222ENST00000560131 IGFALSP35858 605 aa6□□□□□ -1.45
TPM1-222ENST00000560131 CCT4P50991 539 aaKnown RBP6□□□□□ -1.45
TPM1-222ENST00000560131 CCZ1BP86790 482 aa6□□□□□ -1.45
TPM1-222ENST00000560131 CCZ1P86791 482 aaPredicted RBP6□□□□□ -1.45
TPM1-222ENST00000560131 NRG1Q02297 640 aaPredicted RBP6□□□□□ -1.45
TPM1-222ENST00000560131 MAP4K2Q12851 820 aa6□□□□□ -1.45
TPM1-222ENST00000560131 VPS53Q5VIR6 699 aa6□□□□□ -1.45
TPM1-222ENST00000560131 PKN3Q6P5Z2 889 aa6□□□□□ -1.45
TPM1-222ENST00000560131 UBE2R2Q712K3 238 aaPredicted RBP6□□□□□ -1.45
TPM1-222ENST00000560131 DYMQ7RTS9 669 aa6□□□□□ -1.45
TPM1-222ENST00000560131 MAMDC2Q7Z304 686 aaPredicted RBP6□□□□□ -1.45
TPM1-222ENST00000560131 FGD2Q7Z6J4 655 aa6□□□□□ -1.45
TPM1-222ENST00000560131 RPAINQ86UA6 219 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms