RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 ZBTB38Q8NAP3 1195 aaPredicted RBP20.9■□□□□ 0.94
SEMA4B-215ENST00000560089 GOLGB1Q14789 3259 aaKnown RBP20.9■□□□□ 0.94
SEMA4B-215ENST00000560089 PRC1O43663 620 aa20.9■□□□□ 0.94
SEMA4B-215ENST00000560089 SUSD4Q5VX71 490 aa20.9■□□□□ 0.94
SEMA4B-215ENST00000560089 KRT26Q7Z3Y9 468 aa20.9■□□□□ 0.94
SEMA4B-215ENST00000560089 RHBDL2Q9NX52 303 aa20.9■□□□□ 0.94
SEMA4B-215ENST00000560089 SRP68Q9UHB9 627 aaKnown RBP20.9■□□□□ 0.94
SEMA4B-215ENST00000560089 FAM200BP0CF97 657 aa20.89■□□□□ 0.94
SEMA4B-215ENST00000560089 ACADSP16219 412 aa20.89■□□□□ 0.94
SEMA4B-215ENST00000560089 GSTT1P30711 240 aa20.89■□□□□ 0.94
SEMA4B-215ENST00000560089 PEX5P50542 639 aa20.89■□□□□ 0.94
SEMA4B-215ENST00000560089 VCX3BQ9H321 246 aa20.89■□□□□ 0.94
SEMA4B-215ENST00000560089 VCX3AQ9NNX9 186 aa20.89■□□□□ 0.94
SEMA4B-215ENST00000560089 NUP98P52948 1817 aa20.89■□□□□ 0.93
SEMA4B-215ENST00000560089 PCCAP05165 728 aaPredicted RBP20.89■□□□□ 0.93
SEMA4B-215ENST00000560089 GSDMAQ96QA5 445 aa20.89■□□□□ 0.93
SEMA4B-215ENST00000560089 IFIH1Q9BYX4 1025 aaKnown RBP20.89■□□□□ 0.93
SEMA4B-215ENST00000560089 AGPAT5Q9NUQ2 364 aa20.89■□□□□ 0.93
SEMA4B-215ENST00000560089 NIP7Q9Y221 180 aaKnown RBP eCLIP20.89■□□□□ 0.93
SEMA4B-215ENST00000560089 E7ENQ6 273 aa20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 PFDN1O60925 122 aa20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 BAG3O95817 575 aa20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 GSTA2P09210 222 aa20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 CHN1P15882 459 aa20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 SFMBT2Q5VUG0 894 aa20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 RRAGBQ5VZM2 374 aa20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 RNF168Q8IYW5 571 aaPredicted RBP20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 ARHGEF1Q92888 912 aaKnown RBP20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 KRT23Q9C075 422 aa20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 LRRC4BQ9NT99 713 aa20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 BZW2Q9Y6E2 419 aaKnown RBP20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 IRS4O14654 1257 aaPredicted RBP20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 HSPD1P10809 573 aaKnown RBP20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 TRIM28Q13263 835 aaKnown RBP20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 SESTD1Q86VW0 696 aa20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 RNF10Q8N5U6 811 aaKnown RBP20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.88■□□□□ 0.934e-6■■■■■ 42.1
SEMA4B-215ENST00000560089 CCDC42Q96M95 316 aa20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 PPP1R12CQ9BZL4 782 aa20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 NSRP1Q9H0G5 558 aaKnown RBP20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 RANBP17Q9H2T7 1088 aaKnown RBP20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 RNPEPL1Q9HAU8 725 aa20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 COPRSQ9NQ92 184 aa20.88■□□□□ 0.93
SEMA4B-215ENST00000560089 ZNF263O14978 683 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 ZNF24P17028 368 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 CALB2P22676 271 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 RPL13P26373 211 aaKnown RBP20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 SAFBQ15424 915 aaKnown RBP eCLIP20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 CCDC24Q8N4L8 307 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 SLC17A8Q8NDX2 589 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 DNAJC9Q8WXX5 260 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 PAGE5Q96GU1 130 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 SELENOSQ9BQE4 189 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 TLR10Q9BXR5 811 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 RWDD2AQ9UIY3 292 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 ERVV-1B6SEH8 477 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 MBD4O95243 580 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 SHBGP04278 402 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 BNIP1Q12981 228 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 PAK1Q13153 545 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 GALNTL6Q49A17 601 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 IRGCQ6NXR0 463 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 ZNF34Q8IZ26 560 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 ABCF2Q9UG63 623 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 GMEB1Q9Y692 573 aa20.87■□□□□ 0.93
SEMA4B-215ENST00000560089 A0A1W2PQC6 194 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 RAD51CO43502 376 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 ZPR1O75312 459 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 TRIM21P19474 475 aaKnown RBP20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 GBP7Q8N8V2 638 aaPredicted RBP20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 ZNF579Q8NAF0 562 aaKnown RBP20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 UCMAQ8WVF2 138 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 GREM2Q9H772 168 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 VPS54Q9P1Q0 977 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 RNF14Q9UBS8 474 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 DBNLQ9UJU6 430 aaKnown RBP20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 FBXL5Q9UKA1 691 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 PNMA2Q9UL42 364 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 TRIM33Q9UPN9 1127 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 CD2APQ9Y5K6 639 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 POLD1P28340 1107 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 DNA2P51530 1060 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 PHKBQ93100 1093 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 CSRNP2Q9H175 543 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 ISCUQ9H1K1 167 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 PCDHA13Q9Y5I0 950 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 LGALS16A8MUM7 142 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 SART1O43290 800 aaKnown RBP20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 PAX3P23760 479 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 BPIFB4P59827 614 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 MTMR3Q13615 1198 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 CEP128Q6ZU80 1094 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 ARL10Q8N8L6 244 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 PBKQ96KB5 322 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 IWS1Q96ST2 819 aa20.86■□□□□ 0.93
SEMA4B-215ENST00000560089 BRWD3Q6RI45 1802 aa20.85■□□□□ 0.93
SEMA4B-215ENST00000560089 SERPINB4P48594 390 aa20.85■□□□□ 0.93
SEMA4B-215ENST00000560089 PABPC4Q13310 644 aaKnown RBP eCLIP20.85■□□□□ 0.93
SEMA4B-215ENST00000560089 NELFBQ8WX92 580 aa20.85■□□□□ 0.93
SEMA4B-215ENST00000560089 GBP5Q96PP8 586 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms