RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 SYNPO2Q9UMS6 1093 aa6□□□□□ -1.45
SPG11-220ENST00000559933 AGTPBP1Q9UPW5 1226 aa6□□□□□ -1.45
SPG11-220ENST00000559933 DDX49Q9Y6V7 483 aaKnown RBP6□□□□□ -1.45
SPG11-220ENST00000559933 RBBP6Q7Z6E9 1792 aaKnown RBP6□□□□□ -1.45
SPG11-220ENST00000559933 LCTP09848 1927 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 PNMA6FA0A0J9YX94 578 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 SERTM1A2A2V5 107 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 DCDC2BA2VCK2 349 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 BTBD18B2RXH4 712 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 USP17L15C9J2P7 530 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 USP17L13C9JLJ4 530 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 USP17L11C9JVI0 530 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 USP17L18D6R9N7 530 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 USP17L22D6RA61 530 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 USP17L17D6RBQ6 530 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 USP17L19D6RCP7 530 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 USP17L20D6RJB6 530 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 H3BQV1 296 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 VWA5AO00534 786 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 NFIBO00712 420 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 BRD1O95696 1058 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 F13A1P00488 732 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 MMP1P03956 469 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 ZSCAN22P10073 491 aaPredicted RBP5.99□□□□□ -1.45
SPG11-220ENST00000559933 ZBTB48P10074 688 aaPredicted RBP5.99□□□□□ -1.45
SPG11-220ENST00000559933 CETPP11597 493 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 HOXA13P31271 388 aaPredicted RBP5.99□□□□□ -1.45
SPG11-220ENST00000559933 GNAQP50148 359 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 GTF2A2P52657 109 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 HERVK_113P62684 666 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 IRX3P78415 501 aaPredicted RBP5.99□□□□□ -1.45
SPG11-220ENST00000559933 KIF23Q02241 960 aaPredicted RBP5.99□□□□□ -1.45
SPG11-220ENST00000559933 USP17L24Q0WX57 530 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 FSTL1Q12841 308 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 UBAP2LQ14157 1087 aaKnown RBP5.99□□□□□ -1.45
SPG11-220ENST00000559933 PLS1Q14651 629 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 TEAD4Q15561 434 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 MCTP1Q6DN14 999 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 SLC30A10Q6XR72 485 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 FAM160B2Q86V87 743 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 FBXO11Q86XK2 927 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 DIS3L2Q8IYB7 885 aaKnown RBP5.99□□□□□ -1.45
SPG11-220ENST00000559933 EDARADDQ8WWZ3 215 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 UCN2Q96RP3 112 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 LZTS2Q9BRK4 669 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 PHF20Q9BVI0 1012 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 SLC38A10Q9HBR0 1119 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 BARHL2Q9NY43 387 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 CHMP5Q9NZZ3 219 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 CCPG1Q9ULG6 757 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 RIPK3Q9Y572 518 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 PCDHA1Q9Y5I3 950 aa5.99□□□□□ -1.45
SPG11-220ENST00000559933 SMCO2A6NFE2 343 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 PIK3R2O00459 728 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 ALAS1P13196 640 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 ATP2B1P20020 1258 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 NOS2P35228 1153 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 ADCY7P51828 1080 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 NLRP5P59047 1200 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 UBXN2AP68543 259 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 CTBSQ01459 385 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 CEBPZQ03701 1054 aaKnown RBP5.98□□□□□ -1.45
SPG11-220ENST00000559933 COG2Q14746 738 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 PPP2R5BQ15173 497 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 JAKMIP3Q5VZ66 844 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 SNRNP48Q6IEG0 339 aaKnown RBP5.98□□□□□ -1.45
SPG11-220ENST00000559933 USP17L6PQ6QN14 398 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 ANKRD13CQ8N6S4 541 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 FBXO18Q8NFZ0 1043 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 CHURC1Q8WUH1 139 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 TNPO1Q92973 898 aaKnown RBP5.98□□□□□ -1.45
SPG11-220ENST00000559933 TNFRSF25Q93038 417 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 CAPNS2Q96L46 248 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 UIMC1Q96RL1 719 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 CWC22Q9HCG8 908 aaKnown RBP5.98□□□□□ -1.45
SPG11-220ENST00000559933 NDFIP2Q9NV92 336 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 COL20A1Q9P218 1284 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 RBPJLQ9UBG7 517 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 BIN2Q9UBW5 565 aaPredicted RBP5.98□□□□□ -1.45
SPG11-220ENST00000559933 CPA4Q9UI42 421 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 ZNF214Q9UL59 606 aaPredicted RBP5.98□□□□□ -1.45
SPG11-220ENST00000559933 USP3Q9Y6I4 520 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 DNMT3AQ9Y6K1 912 aaPredicted RBP5.98□□□□□ -1.45
SPG11-220ENST00000559933 THSD7BQ9C0I4 1608 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 ADGRA2Q96PE1 1338 aa5.98□□□□□ -1.45
SPG11-220ENST00000559933 A6NJR5 290 aa5.97□□□□□ -1.45
SPG11-220ENST00000559933 RASSF10A6NK89 507 aa5.97□□□□□ -1.45
SPG11-220ENST00000559933 M0R2N6 131 aa5.97□□□□□ -1.45
SPG11-220ENST00000559933 MEIS2O14770 477 aa5.97□□□□□ -1.45
SPG11-220ENST00000559933 PLA2G6O60733 806 aa5.97□□□□□ -1.45
SPG11-220ENST00000559933 ZBED4O75132 1171 aa5.97□□□□□ -1.45
SPG11-220ENST00000559933 CFBP00751 764 aa5.97□□□□□ -1.45
SPG11-220ENST00000559933 ICAM1P05362 532 aa5.97□□□□□ -1.45
SPG11-220ENST00000559933 ARAFP10398 606 aa5.97□□□□□ -1.45
SPG11-220ENST00000559933 MAPTP10636 758 aaKnown RBP5.97□□□□□ -1.45
SPG11-220ENST00000559933 NCLP19338 710 aaKnown RBP5.97□□□□□ -1.45
SPG11-220ENST00000559933 HOXA7P31268 230 aaPredicted RBP5.97□□□□□ -1.45
SPG11-220ENST00000559933 KRT2P35908 639 aa5.97□□□□□ -1.45
SPG11-220ENST00000559933 PSMA6P60900 246 aaKnown RBP5.97□□□□□ -1.45
SPG11-220ENST00000559933 CLDN10P78369 228 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms