RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 GPNMBQ14956 572 aa20.08■□□□□ 0.81
SMAD3-210ENST00000559092 TRIM22Q8IYM9 498 aa20.08■□□□□ 0.81
SMAD3-210ENST00000559092 REXO1Q8N1G1 1221 aaKnown RBP20.08■□□□□ 0.81
SMAD3-210ENST00000559092 PGBD1Q96JS3 809 aa20.08■□□□□ 0.81
SMAD3-210ENST00000559092 SDF4Q9BRK5 362 aa20.08■□□□□ 0.81
SMAD3-210ENST00000559092 SLC26A6Q9BXS9 759 aa20.08■□□□□ 0.81
SMAD3-210ENST00000559092 UPF3BQ9BZI7 483 aaKnown RBP20.08■□□□□ 0.81
SMAD3-210ENST00000559092 SMARCAD1Q9H4L7 1026 aa20.08■□□□□ 0.81
SMAD3-210ENST00000559092 SH3GLB2Q9NR46 395 aa20.08■□□□□ 0.81
SMAD3-210ENST00000559092 TMEM260Q9NX78 707 aa20.08■□□□□ 0.81
SMAD3-210ENST00000559092 ERAP1Q9NZ08 941 aa20.08■□□□□ 0.81
SMAD3-210ENST00000559092 TELO2Q9Y4R8 837 aa20.08■□□□□ 0.81
SMAD3-210ENST00000559092 EMSYQ7Z589 1322 aa20.07■□□□□ 0.8
SMAD3-210ENST00000559092 NRCAMQ92823 1304 aa20.07■□□□□ 0.8
SMAD3-210ENST00000559092 ZNF618Q5T7W0 954 aa20.07■□□□□ 0.8
SMAD3-210ENST00000559092 JAKMIP3Q5VZ66 844 aa20.07■□□□□ 0.8
SMAD3-210ENST00000559092 CPLX2Q6PUV4 134 aaKnown RBP20.07■□□□□ 0.8
SMAD3-210ENST00000559092 TRIM50Q86XT4 487 aa20.07■□□□□ 0.8
SMAD3-210ENST00000559092 FAM177A1Q8N128 213 aaPredicted RBP20.07■□□□□ 0.8
SMAD3-210ENST00000559092 CRYGNQ8WXF5 182 aa20.07■□□□□ 0.8
SMAD3-210ENST00000559092 SLC9A7Q96T83 725 aa20.07■□□□□ 0.8
SMAD3-210ENST00000559092 NCOA5Q9HCD5 579 aaKnown RBP20.07■□□□□ 0.8
SMAD3-210ENST00000559092 AGO4Q9HCK5 861 aaKnown RBP20.07■□□□□ 0.8
SMAD3-210ENST00000559092 SLC9A2Q9UBY0 812 aa20.07■□□□□ 0.8
SMAD3-210ENST00000559092 PCDHA11Q9Y5I1 949 aa20.07■□□□□ 0.8
SMAD3-210ENST00000559092 CDH23Q9H251 3354 aa20.06■□□□□ 0.8
SMAD3-210ENST00000559092 CPLX1O14810 134 aa20.06■□□□□ 0.8
SMAD3-210ENST00000559092 TREHO43280 583 aa20.06■□□□□ 0.8
SMAD3-210ENST00000559092 NBNO60934 754 aa20.06■□□□□ 0.8
SMAD3-210ENST00000559092 ARP10275 920 aa20.06■□□□□ 0.8
SMAD3-210ENST00000559092 THPOP40225 353 aa20.06■□□□□ 0.8
SMAD3-210ENST00000559092 ADAM17P78536 824 aa20.06■□□□□ 0.8
SMAD3-210ENST00000559092 SSRP1Q08945 709 aaKnown RBP20.06■□□□□ 0.8
SMAD3-210ENST00000559092 GRIN2CQ14957 1233 aa20.06■□□□□ 0.8
SMAD3-210ENST00000559092 CNKSR3Q6P9H4 555 aa20.06■□□□□ 0.8
SMAD3-210ENST00000559092 TRAF7Q6Q0C0 670 aa20.06■□□□□ 0.8
SMAD3-210ENST00000559092 GLG1Q92896 1179 aa20.06■□□□□ 0.8
SMAD3-210ENST00000559092 TNPO1Q92973 898 aaKnown RBP20.06■□□□□ 0.8
SMAD3-210ENST00000559092 WNT8BQ93098 351 aa20.06■□□□□ 0.8
SMAD3-210ENST00000559092 SETD4Q9NVD3 440 aa20.06■□□□□ 0.8
SMAD3-210ENST00000559092 PKD2L1Q9P0L9 805 aa20.06■□□□□ 0.8
SMAD3-210ENST00000559092 RSPH10B2B2RC85 870 aa20.05■□□□□ 0.8
SMAD3-210ENST00000559092 EFCAB14O75071 495 aa20.05■□□□□ 0.8
SMAD3-210ENST00000559092 LGR5O75473 907 aa20.05■□□□□ 0.8
SMAD3-210ENST00000559092 RSPH10BP0C881 870 aa20.05■□□□□ 0.8
SMAD3-210ENST00000559092 IL17RAQ96F46 866 aa20.05■□□□□ 0.8
SMAD3-210ENST00000559092 SLC28A3Q9HAS3 691 aa20.05■□□□□ 0.8
SMAD3-210ENST00000559092 ABHD14A-ACY1A0A1B0GW23 586 aa20.04■□□□□ 0.8
SMAD3-210ENST00000559092 FAM86B1E9PN63 330 aa20.04■□□□□ 0.8
SMAD3-210ENST00000559092 FAM86B2P0C5J1 330 aa20.04■□□□□ 0.8
SMAD3-210ENST00000559092 ITGB3BPQ13352 177 aaPredicted RBP20.04■□□□□ 0.8
SMAD3-210ENST00000559092 PLPPR4Q7Z2D5 763 aa20.04■□□□□ 0.8
SMAD3-210ENST00000559092 RPAINQ86UA6 219 aa20.04■□□□□ 0.8
SMAD3-210ENST00000559092 SLC17A8Q8NDX2 589 aa20.04■□□□□ 0.8
SMAD3-210ENST00000559092 LMBR1Q8WVP7 490 aa20.04■□□□□ 0.8
SMAD3-210ENST00000559092 AZI2Q9H6S1 392 aa20.04■□□□□ 0.8
SMAD3-210ENST00000559092 IGLV3-22A0A075B6J6 115 aa20.03■□□□□ 0.8
SMAD3-210ENST00000559092 ATG7O95352 703 aa20.03■□□□□ 0.8
SMAD3-210ENST00000559092 DEXIO95424 95 aa20.03■□□□□ 0.8
SMAD3-210ENST00000559092 FOSL2P15408 326 aa20.03■□□□□ 0.8
SMAD3-210ENST00000559092 CIITAP33076 1130 aa20.03■□□□□ 0.8
SMAD3-210ENST00000559092 KCNJ6P48051 423 aa20.03■□□□□ 0.8
SMAD3-210ENST00000559092 RABGGTBP53611 331 aa20.03■□□□□ 0.8
SMAD3-210ENST00000559092 ACTR2P61160 394 aa20.03■□□□□ 0.8
SMAD3-210ENST00000559092 PPFIA1Q13136 1202 aa20.03■□□□□ 0.8
SMAD3-210ENST00000559092 IKBKEQ14164 716 aa20.03■□□□□ 0.8
SMAD3-210ENST00000559092 MBTPS1Q14703 1052 aa20.03■□□□□ 0.8
SMAD3-210ENST00000559092 ANKRD1Q15327 319 aa20.03■□□□□ 0.8
SMAD3-210ENST00000559092 TAF2Q6P1X5 1199 aa20.03■□□□□ 0.8
SMAD3-210ENST00000559092 PLA2G4DQ86XP0 818 aa20.03■□□□□ 0.8
SMAD3-210ENST00000559092 MYLIPQ8WY64 445 aa20.03■□□□□ 0.8
SMAD3-210ENST00000559092 VPS54Q9P1Q0 977 aa20.03■□□□□ 0.8
SMAD3-210ENST00000559092 YBX2Q9Y2T7 364 aaKnown RBP20.03■□□□□ 0.8
SMAD3-210ENST00000559092 RRN3P2A6NIE6 340 aa20.02■□□□□ 0.8
SMAD3-210ENST00000559092 KIF28PB7ZC32 967 aa20.02■□□□□ 0.8
SMAD3-210ENST00000559092 CDKL5O76039 1030 aa20.02■□□□□ 0.8
SMAD3-210ENST00000559092 RPLP2P05387 115 aaKnown RBP20.02■□□□□ 0.8
SMAD3-210ENST00000559092 SLC26A2P50443 739 aa20.02■□□□□ 0.8
SMAD3-210ENST00000559092 USP11P51784 963 aa20.02■□□□□ 0.8
SMAD3-210ENST00000559092 NLRP5P59047 1200 aa20.02■□□□□ 0.8
SMAD3-210ENST00000559092 SETQ01105 290 aaPredicted RBP20.02■□□□□ 0.8
SMAD3-210ENST00000559092 FAM26DQ5JW98 314 aa20.02■□□□□ 0.8
SMAD3-210ENST00000559092 GALNT17Q6IS24 598 aa20.02■□□□□ 0.8
SMAD3-210ENST00000559092 HERC6Q8IVU3 1022 aa20.02■□□□□ 0.8
SMAD3-210ENST00000559092 PCYT2Q99447 389 aa20.02■□□□□ 0.8
SMAD3-210ENST00000559092 LARP6Q9BRS8 491 aaKnown RBP20.02■□□□□ 0.8
SMAD3-210ENST00000559092 C22orf23Q9BZE7 217 aa20.02■□□□□ 0.8
SMAD3-210ENST00000559092 NKX2-4Q9H2Z4 354 aa20.02■□□□□ 0.8
SMAD3-210ENST00000559092 TBC1D22BQ9NU19 505 aa20.02■□□□□ 0.8
SMAD3-210ENST00000559092 A0A0C4DFX4 3053 aa20.01■□□□□ 0.79
SMAD3-210ENST00000559092 MBLAC1A4D2B0 266 aaPredicted RBP20.01■□□□□ 0.79
SMAD3-210ENST00000559092 IPO5O00410 1097 aaKnown RBP20.01■□□□□ 0.79
SMAD3-210ENST00000559092 ADAMTS3O15072 1205 aa20.01■□□□□ 0.79
SMAD3-210ENST00000559092 PPFIA3O75145 1194 aa20.01■□□□□ 0.79
SMAD3-210ENST00000559092 STAT5BP51692 787 aa20.01■□□□□ 0.79
SMAD3-210ENST00000559092 WDR5P61964 334 aaKnown RBP20.01■□□□□ 0.79
SMAD3-210ENST00000559092 PCDHA4Q9UN74 947 aa20.01■□□□□ 0.79
SMAD3-210ENST00000559092 MYH7BA7E2Y1 1941 aa20.01■□□□□ 0.79
SMAD3-210ENST00000559092 CHD9Q3L8U1 2897 aa20.01■□□□□ 0.79
SMAD3-210ENST00000559092 IGKV6D-21A0A0A0MT36 114 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms