RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 PIBF1Q8WXW3 757 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 TAAR1Q96RJ0 339 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 RBM19Q9Y4C8 960 aaKnown RBP6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 PCDHA1Q9Y5I3 950 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 SNX14Q9Y5W7 946 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 LTBP2Q14767 1821 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 KIAA1217Q5T5P2 1943 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 RBM47A0AV96 593 aaKnown RBP6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 REC8O95072 547 aa6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 CFBP00751 764 aa6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 C6orf222P0C671 652 aaPredicted RBP6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 CALM1P0DP23 149 aa6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 CALM2P0DP24 149 aa6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 CALM3P0DP25 149 aa6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 KIF5BP33176 963 aa6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 RPIAP49247 311 aa6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 KCNA10Q16322 511 aa6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 SWI5Q1ZZU3 235 aa6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 TRIM60Q495X7 471 aa6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 C1orf53Q5VUE5 145 aa6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 TMTC3Q6ZXV5 915 aa6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 TLK2Q86UE8 772 aa6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 MICU3Q86XE3 530 aa6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 CMTR1Q8N1G2 835 aaKnown RBP6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 PRIMPOLQ96LW4 560 aa6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 TSEN34Q9BSV6 310 aaKnown RBP6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 BRPF3Q9ULD4 1205 aa6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 SLC12A7Q9Y666 1083 aa6.96□□□□□ -1.29
CTDSPL2-204ENST00000558966 EIF2AK2P19525 551 aaKnown RBP6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 FSHRP23945 695 aa6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 SMARCA1P28370 1054 aa6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 HOXA13P31271 388 aaPredicted RBP6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 BEX3Q00994 111 aa6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 DUSP28Q4G0W2 176 aa6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 HABP4Q5JVS0 413 aaKnown RBP6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 IQSEC1Q6DN90 963 aa6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 NOL8Q76FK4 1167 aaKnown RBP6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 FANCBQ8NB91 859 aa6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 EMID1Q96A84 441 aaPredicted RBP6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 JAKMIP1Q96N16 626 aaKnown RBP6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 RMDN3Q96TC7 470 aa6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 GDF15Q99988 308 aa6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 SPC25Q9HBM1 224 aa6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 PXMP2Q9NR77 195 aa6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 TMPRSS4Q9NRS4 437 aa6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 ATP11BQ9Y2G3 1177 aa6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 MAP4K5Q9Y4K4 846 aa6.96□□□□□ -1.3
CTDSPL2-204ENST00000558966 KLF18A0A0U1RQI7 1052 aa6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 hCG_1642624A0A1W2PR95 340 aa6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 DYNC1LI2O43237 492 aaPredicted RBP6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 EPB41L2O43491 1005 aaKnown RBP6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 ARIH2O95376 493 aa6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 CD2BP2O95400 341 aaKnown RBP6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 ASGR1P07306 291 aa6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 HMGB1P09429 215 aaKnown RBP6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 MAGEA10P43363 369 aaPredicted RBP6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 GNAQP50148 359 aa6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 GNASQ5JWF2 1037 aa6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 SND1Q7KZF4 910 aaKnown RBP eCLIP6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 PCSK9Q8NBP7 692 aaKnown RBP6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 IL31RAQ8NI17 732 aa6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 NSUN6Q8TEA1 469 aaKnown RBP6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 COPS5Q92905 334 aa6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 RRP36Q96EU6 259 aaKnown RBP6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 LZTS2Q9BRK4 669 aa6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 USP26Q9BXU7 913 aa6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 WDR11Q9BZH6 1224 aa6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 STARD7Q9NQZ5 370 aa6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 PDLIM7Q9NR12 457 aa6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 Q9Y3F1 56 aa6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 CNTNAP5Q8WYK1 1306 aa6.95□□□□□ -1.3
CTDSPL2-204ENST00000558966 B4DLN1 442 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 ZBTB43O43298 467 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 STAU1O95793 577 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 NR3C2P08235 984 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 RPS6KB1P23443 525 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 CDC27P30260 824 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 GRM5P41594 1212 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 MRPL12P52815 198 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 TLE2Q04725 743 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 TRAF1Q13077 416 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 PPP2R5BQ15173 497 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 FSCN1Q16658 493 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 RTN1Q16799 776 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 FOXD4L5Q5VV16 416 aaPredicted RBP6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 ARHGEF16Q5VV41 709 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 CCDC62Q6P9F0 684 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 BLOC1S2Q6QNY1 142 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 SAMD3Q8N6K7 520 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 SCFD2Q8WU76 684 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 FOXD4L4Q8WXT5 416 aaPredicted RBP6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 GLT1D1Q96MS3 346 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 IWS1Q96ST2 819 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 MPHOSPH6Q99547 160 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 HINFPQ9BQA5 517 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 PDCD2LQ9BRP1 358 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 AGXT2Q9BYV1 514 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 AP5M1Q9H0R1 490 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 CYLDQ9NQC7 956 aa6.94□□□□□ -1.3
CTDSPL2-204ENST00000558966 MAP3K20Q9NYL2 800 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms