RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 ANKRD1Q15327 319 aa14.42□□□□□ -0.1
RABGGTA-207ENST00000558936 GNPTABQ3T906 1256 aa14.42□□□□□ -0.1
RABGGTA-207ENST00000558936 MARCH8Q5T0T0 291 aa14.42□□□□□ -0.1
RABGGTA-207ENST00000558936 RASIP1Q5U651 963 aa14.42□□□□□ -0.1
RABGGTA-207ENST00000558936 NIPA1Q7RTP0 329 aa14.42□□□□□ -0.1
RABGGTA-207ENST00000558936 NLRX1Q86UT6 975 aa14.42□□□□□ -0.1
RABGGTA-207ENST00000558936 LBHD1Q9BQE6 289 aaPredicted RBP14.42□□□□□ -0.1
RABGGTA-207ENST00000558936 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.42□□□□□ -0.11e-6■□□□□ 8.5
RABGGTA-207ENST00000558936 LIMCH1Q9UPQ0 1083 aa14.42□□□□□ -0.1
RABGGTA-207ENST00000558936 NFASCO94856 1347 aa14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 CHD9Q3L8U1 2897 aa14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 CYP3A7-CYP3A51PA0A087WV96 503 aa14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 H3BRB1 525 aa14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 SLC37A4O43826 429 aa14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 RAG1P15918 1043 aa14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 CYP3A7P24462 503 aa14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 GNA11P29992 359 aa14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 TCF7P36402 384 aaPredicted RBP14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 FOSBP53539 338 aa14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 CHMP4BP1P59074 171 aa14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 BRDTQ58F21 947 aaPredicted RBP14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 TMEM240Q5SV17 173 aa14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 UTP14CQ5TAP6 766 aaKnown RBP14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 ABHD15Q6UXT9 468 aa14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 PLA2G4DQ86XP0 818 aa14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 TRIM22Q8IYM9 498 aa14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 TDHQ8IZJ6 230 aa14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 SEZ6LQ9BYH1 1024 aa14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 TUT1Q9H6E5 874 aaKnown RBP14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 CXXC1Q9P0U4 656 aaPredicted RBP14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 MYH9P35579 1960 aaKnown RBP14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 EVPLQ92817 2033 aa14.41□□□□□ -0.1
RABGGTA-207ENST00000558936 CHD7Q9P2D1 2997 aa14.4□□□□□ -0.1
RABGGTA-207ENST00000558936 BTBD18B2RXH4 712 aa14.4□□□□□ -0.1
RABGGTA-207ENST00000558936 MAFGO15525 162 aa14.4□□□□□ -0.1
RABGGTA-207ENST00000558936 TREHO43280 583 aa14.4□□□□□ -0.1
RABGGTA-207ENST00000558936 SMIM10L2AP0DMW4 78 aa14.4□□□□□ -0.1
RABGGTA-207ENST00000558936 SMIM10L2BP0DMW5 78 aa14.4□□□□□ -0.1
RABGGTA-207ENST00000558936 ACTR2P61160 394 aa14.4□□□□□ -0.1
RABGGTA-207ENST00000558936 AKAP17AQ02040 695 aaKnown RBP14.4□□□□□ -0.1
RABGGTA-207ENST00000558936 PTPN11Q06124 597 aaPredicted RBP14.4□□□□□ -0.1
RABGGTA-207ENST00000558936 PTGISQ16647 500 aa14.4□□□□□ -0.1
RABGGTA-207ENST00000558936 INF2Q27J81 1249 aa14.4□□□□□ -0.1
RABGGTA-207ENST00000558936 FAM47CQ5HY64 1035 aa14.4□□□□□ -0.1
RABGGTA-207ENST00000558936 ETNPPLQ8TBG4 499 aa14.4□□□□□ -0.1
RABGGTA-207ENST00000558936 GLT8D2Q9H1C3 349 aa14.4□□□□□ -0.1
RABGGTA-207ENST00000558936 HIPK3Q9H422 1215 aa14.4□□□□□ -0.1
RABGGTA-207ENST00000558936 SETD4Q9NVD3 440 aa14.4□□□□□ -0.1
RABGGTA-207ENST00000558936 ZBTB42B2RXF5 422 aa14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 KIF28PB7ZC32 967 aa14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 DDX39AO00148 427 aaKnown RBP14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 TLR3O15455 904 aaKnown RBP14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 STBD1O95210 358 aa14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 IQCF3P0C7M6 154 aa14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 RBL2Q08999 1139 aa14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 PRR16Q569H4 304 aa14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 KRT40Q6A162 431 aa14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 RUFY4Q6ZNE9 571 aa14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 CCDC60Q8IWA6 550 aaPredicted RBP14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 CCDC148Q8NFR7 591 aa14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 CCDC12Q8WUD4 166 aaPredicted RBP14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 SEPT1Q8WYJ6 367 aa14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 HAS1Q92839 578 aa14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 SLC5A5Q92911 643 aa14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 JPH1Q9HDC5 661 aaPredicted RBP14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 SLC9A2Q9UBY0 812 aa14.39□□□□□ -0.11
RABGGTA-207ENST00000558936 IPO5O00410 1097 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 NBNO60934 754 aa14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 PSMD10O75832 226 aa14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 SLC34A2O95436 690 aa14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 MMP1P03956 469 aa14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 MARK3P27448 753 aa14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 USP11P51784 963 aa14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 GUCY1B3Q02153 619 aa14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 MKRN4PQ13434 485 aaPredicted RBP14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 RABEP1Q15276 862 aa14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 UGCGQ16739 394 aa14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 LRIT3Q3SXY7 679 aa14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 Q4G0T1 1027 aa14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 ZNF365Q70YC5 407 aa14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 SERINC5Q86VE9 423 aa14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 LMBR1Q8WVP7 490 aa14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 TRAPPC12Q8WVT3 735 aa14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 TMX3Q96JJ7 454 aa14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 EMSYQ7Z589 1322 aa14.38□□□□□ -0.11
RABGGTA-207ENST00000558936 REV3LO60673 3130 aa14.37□□□□□ -0.11
RABGGTA-207ENST00000558936 GRXCR1A8MXD5 290 aa14.37□□□□□ -0.11
RABGGTA-207ENST00000558936 ZNF862O60290 1169 aa14.37□□□□□ -0.11
RABGGTA-207ENST00000558936 CKBP12277 381 aa14.37□□□□□ -0.11
RABGGTA-207ENST00000558936 FPGSQ05932 587 aa14.37□□□□□ -0.11
RABGGTA-207ENST00000558936 PLCB4Q15147 1175 aa14.37□□□□□ -0.11
RABGGTA-207ENST00000558936 ZNF618Q5T7W0 954 aa14.37□□□□□ -0.11
RABGGTA-207ENST00000558936 PIK3AP1Q6ZUJ8 805 aa14.37□□□□□ -0.11
RABGGTA-207ENST00000558936 CDHR1Q96JP9 859 aa14.37□□□□□ -0.11
RABGGTA-207ENST00000558936 KCNMB3Q9NPA1 279 aa14.37□□□□□ -0.11
RABGGTA-207ENST00000558936 MBLAC1A4D2B0 266 aaPredicted RBP14.36□□□□□ -0.11
RABGGTA-207ENST00000558936 EML1O00423 815 aa14.36□□□□□ -0.11
RABGGTA-207ENST00000558936 NOP56O00567 594 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-207ENST00000558936 CDKL5O76039 1030 aa14.36□□□□□ -0.11
RABGGTA-207ENST00000558936 SPIRE1Q08AE8 756 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms