RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 TLE6Q9H808 572 aa13.97□□□□□ -0.17
SMAD3-206ENST00000558739 WDR19Q8NEZ3 1342 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 MYH6P13533 1939 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 C2CD4DB7Z1M9 353 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 FOXP2O15409 715 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 DGKIO75912 1065 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 CHRNA1P02708 482 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 SP2Q02086 613 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 LAMC2Q13753 1193 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 HSP90AB4PQ58FF6 505 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 MYSM1Q5VVJ2 828 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 SYCE2Q6PIF2 218 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 TRIM50Q86XT4 487 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 APBB2Q92870 758 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 GPKOWQ92917 476 aaPredicted RBP eCLIP13.96□□□□□ -0.17
SMAD3-206ENST00000558739 SPATA33Q96N06 139 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 RMDN3Q96TC7 470 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 SETD4Q9NVD3 440 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 HCSTQ9UBK5 93 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 SORCS3Q9UPU3 1222 aa13.96□□□□□ -0.17
SMAD3-206ENST00000558739 CACNA1IQ9P0X4 2223 aa13.95□□□□□ -0.18
SMAD3-206ENST00000558739 ENPP3O14638 875 aa13.95□□□□□ -0.18
SMAD3-206ENST00000558739 NOVP48745 357 aa13.95□□□□□ -0.18
SMAD3-206ENST00000558739 PUM1Q14671 1186 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMAD3-206ENST00000558739 LPIN1Q14693 890 aa13.95□□□□□ -0.18
SMAD3-206ENST00000558739 ANGPT1Q15389 498 aa13.95□□□□□ -0.18
SMAD3-206ENST00000558739 STXBP2Q15833 593 aa13.95□□□□□ -0.18
SMAD3-206ENST00000558739 FLCNQ8NFG4 579 aa13.95□□□□□ -0.18
SMAD3-206ENST00000558739 KCNG4Q8TDN1 519 aa13.95□□□□□ -0.18
SMAD3-206ENST00000558739 NSUN6Q8TEA1 469 aaKnown RBP13.95□□□□□ -0.18
SMAD3-206ENST00000558739 ZFP91Q96JP5 570 aaPredicted RBP13.95□□□□□ -0.18
SMAD3-206ENST00000558739 TELO2Q9Y4R8 837 aa13.95□□□□□ -0.18
SMAD3-206ENST00000558739 R4GN57 208 aa13.95□□□□□ -0.18
SMAD3-206ENST00000558739 LOXHD1Q8IVV2 1947 aa13.95□□□□□ -0.18
SMAD3-206ENST00000558739 FLNBO75369 2602 aaKnown RBP13.94□□□□□ -0.18
SMAD3-206ENST00000558739 ZNF316A6NFI3 1004 aaPredicted RBP13.94□□□□□ -0.18
SMAD3-206ENST00000558739 PATL2C9JE40 543 aaKnown RBP13.94□□□□□ -0.18
SMAD3-206ENST00000558739 RNF113AO15541 343 aaKnown RBP13.94□□□□□ -0.18
SMAD3-206ENST00000558739 RANBP6O60518 1105 aaKnown RBP13.94□□□□□ -0.18
SMAD3-206ENST00000558739 PPFIA4O75335 1185 aa13.94□□□□□ -0.18
SMAD3-206ENST00000558739 GGPS1O95749 300 aa13.94□□□□□ -0.18
SMAD3-206ENST00000558739 LGALS2P05162 132 aa13.94□□□□□ -0.18
SMAD3-206ENST00000558739 PDHBP11177 359 aa13.94□□□□□ -0.18
SMAD3-206ENST00000558739 UBA1P22314 1058 aaKnown RBP13.94□□□□□ -0.18
SMAD3-206ENST00000558739 LLGL2Q6P1M3 1020 aa13.94□□□□□ -0.18
SMAD3-206ENST00000558739 RUFY4Q6ZNE9 571 aa13.94□□□□□ -0.18
SMAD3-206ENST00000558739 UBALD2Q8IYN6 164 aa13.94□□□□□ -0.18
SMAD3-206ENST00000558739 DCLK2Q8N568 766 aa13.94□□□□□ -0.18
SMAD3-206ENST00000558739 KBTBD3Q8NAB2 608 aa13.94□□□□□ -0.18
SMAD3-206ENST00000558739 KAT6AQ92794 2004 aa13.94□□□□□ -0.18
SMAD3-206ENST00000558739 TMEM47Q9BQJ4 181 aa13.94□□□□□ -0.18
SMAD3-206ENST00000558739 POMKQ9H5K3 350 aa13.94□□□□□ -0.18
SMAD3-206ENST00000558739 DLL3Q9NYJ7 618 aa13.94□□□□□ -0.18
SMAD3-206ENST00000558739 FANCMQ8IYD8 2048 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 GCN1Q92616 2671 aaKnown RBP13.93□□□□□ -0.18
SMAD3-206ENST00000558739 B4DLN1 442 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 H3BRB1 525 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 SMARCA5O60264 1052 aaPredicted RBP13.93□□□□□ -0.18
SMAD3-206ENST00000558739 CAND2O75155 1236 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 GOLGA8HP0CJ92 632 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 NPR3P17342 541 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 TECP42680 631 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 MRPL12P52815 198 aaKnown RBP13.93□□□□□ -0.18
SMAD3-206ENST00000558739 ERVFC1P60507 584 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 KCNC3Q14003 757 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 DUSP6Q16828 381 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 FAM26DQ5JW98 314 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 CELF3Q5SZQ8 465 aaKnown RBP13.93□□□□□ -0.18
SMAD3-206ENST00000558739 ANKRD54Q6NXT1 300 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 CCDC105Q8IYK2 499 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 CRIPAKQ8N1N5 446 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 IL31RAQ8NI17 732 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 FEZF2Q8TBJ5 459 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 LMBR1Q8WVP7 490 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 NEK1Q96PY6 1258 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 NAPBQ9H115 298 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 MFSD1Q9H3U5 465 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 TUT1Q9H6E5 874 aaKnown RBP13.93□□□□□ -0.18
SMAD3-206ENST00000558739 EHMT1Q9H9B1 1298 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 WDFY3Q8IZQ1 3526 aa13.93□□□□□ -0.18
SMAD3-206ENST00000558739 LMNAP02545 664 aaKnown RBP13.92□□□□□ -0.18
SMAD3-206ENST00000558739 NR3C2P08235 984 aa13.92□□□□□ -0.18
SMAD3-206ENST00000558739 WEE2P0C1S8 567 aa13.92□□□□□ -0.18
SMAD3-206ENST00000558739 GNAT2P19087 354 aa13.92□□□□□ -0.18
SMAD3-206ENST00000558739 CLCN5P51795 746 aa13.92□□□□□ -0.18
SMAD3-206ENST00000558739 ZNF543Q08ER8 600 aa13.92□□□□□ -0.18
SMAD3-206ENST00000558739 MGAT3Q09327 533 aa13.92□□□□□ -0.18
SMAD3-206ENST00000558739 APOBRQ0VD83 1088 aa13.92□□□□□ -0.18
SMAD3-206ENST00000558739 ARHGEF16Q5VV41 709 aa13.92□□□□□ -0.18
SMAD3-206ENST00000558739 CMTR2Q8IYT2 770 aaKnown RBP13.92□□□□□ -0.18
SMAD3-206ENST00000558739 MICAL1Q8TDZ2 1067 aa13.92□□□□□ -0.18
SMAD3-206ENST00000558739 PANK1Q8TE04 598 aa13.92□□□□□ -0.18
SMAD3-206ENST00000558739 AGO3Q9H9G7 860 aaKnown RBP13.92□□□□□ -0.18
SMAD3-206ENST00000558739 PXMP2Q9NR77 195 aa13.92□□□□□ -0.18
SMAD3-206ENST00000558739 FNDC1Q4ZHG4 1894 aaPredicted RBP13.92□□□□□ -0.18
SMAD3-206ENST00000558739 EIF3JO75822 258 aaKnown RBP13.91□□□□□ -0.18
SMAD3-206ENST00000558739 SLC3A2P08195 630 aaKnown RBP13.91□□□□□ -0.18
SMAD3-206ENST00000558739 IBSPP21815 317 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-206ENST00000558739 ADAM17P78536 824 aa13.91□□□□□ -0.18
SMAD3-206ENST00000558739 ARHGAP4P98171 946 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms