RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 TMTC3Q6ZXV5 915 aa13.25□□□□□ -0.29
CASC4-205ENST00000558735 GJD3Q8N144 294 aa13.25□□□□□ -0.29
CASC4-205ENST00000558735 ATP6V0A1Q93050 837 aa13.25□□□□□ -0.29
CASC4-205ENST00000558735 TGS1Q96RS0 853 aaKnown RBP13.25□□□□□ -0.29
CASC4-205ENST00000558735 KCNH6Q9H252 994 aa13.25□□□□□ -0.29
CASC4-205ENST00000558735 SUGCTQ9HAC7 445 aa13.25□□□□□ -0.29
CASC4-205ENST00000558735 BRPF3Q9ULD4 1205 aa13.25□□□□□ -0.29
CASC4-205ENST00000558735 COL4A4P53420 1690 aaPredicted RBP13.24□□□□□ -0.29
CASC4-205ENST00000558735 C17orf102A2RUQ5 167 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 EFCAB14O75071 495 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 ALADP13716 330 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 ITGB5P18084 799 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 THPOP40225 353 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 ADAM17P78536 824 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 DEFB103AP81534 67 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 FUT2Q10981 343 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 IKBKEQ14164 716 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 UBE2SQ16763 222 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 PUS10Q3MIT2 529 aaKnown RBP13.24□□□□□ -0.29
CASC4-205ENST00000558735 ADCK5Q3MIX3 580 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 RNF20Q5VTR2 975 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 APOA5Q6Q788 366 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 DHX32Q7L7V1 743 aaKnown RBP13.24□□□□□ -0.29
CASC4-205ENST00000558735 NLRX1Q86UT6 975 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 DBF4BQ8NFT6 615 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.24□□□□□ -0.29
CASC4-205ENST00000558735 GDPD5Q8WTR4 605 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 TCEANC2Q96MN5 208 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 OSBPL7Q9BZF2 842 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 SETD4Q9NVD3 440 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 UBIAD1Q9Y5Z9 338 aa13.24□□□□□ -0.29
CASC4-205ENST00000558735 LINC01553A4QN01 128 aa13.23□□□□□ -0.29
CASC4-205ENST00000558735 RSPH10B2B2RC85 870 aa13.23□□□□□ -0.29
CASC4-205ENST00000558735 LGR5O75473 907 aa13.23□□□□□ -0.29
CASC4-205ENST00000558735 RSPH10BP0C881 870 aa13.23□□□□□ -0.29
CASC4-205ENST00000558735 UTP14CQ5TAP6 766 aaKnown RBP13.23□□□□□ -0.29
CASC4-205ENST00000558735 SYNE3Q6ZMZ3 975 aa13.23□□□□□ -0.29
CASC4-205ENST00000558735 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.23□□□□□ -0.29
CASC4-205ENST00000558735 ALYREFQ86V81 257 aaKnown RBP13.23□□□□□ -0.29
CASC4-205ENST00000558735 MICU3Q86XE3 530 aa13.23□□□□□ -0.29
CASC4-205ENST00000558735 TRIM50Q86XT4 487 aa13.23□□□□□ -0.29
CASC4-205ENST00000558735 GPRASP2Q96D09 838 aa13.23□□□□□ -0.29
CASC4-205ENST00000558735 ZBED2Q9BTP6 218 aa13.23□□□□□ -0.29
CASC4-205ENST00000558735 PCDHA6Q9UN73 950 aa13.23□□□□□ -0.29
CASC4-205ENST00000558735 PCDHA8Q9Y5H6 950 aa13.23□□□□□ -0.29
CASC4-205ENST00000558735 PTPRSQ13332 1948 aa13.23□□□□□ -0.29
CASC4-205ENST00000558735 GSTTP1A0A1W2PQM5 241 aa13.22□□□□□ -0.29
CASC4-205ENST00000558735 POTEB3A0JP26 581 aa13.22□□□□□ -0.29
CASC4-205ENST00000558735 GRXCR2A6NFK2 248 aa13.22□□□□□ -0.29
CASC4-205ENST00000558735 KCNA2P16389 499 aa13.22□□□□□ -0.29
CASC4-205ENST00000558735 SP4Q02446 784 aa13.22□□□□□ -0.29
CASC4-205ENST00000558735 MKRN4PQ13434 485 aaPredicted RBP13.22□□□□□ -0.29
CASC4-205ENST00000558735 COL19A1Q14993 1142 aa13.22□□□□□ -0.29
CASC4-205ENST00000558735 PLEKHG4Q58EX7 1191 aa13.22□□□□□ -0.29
CASC4-205ENST00000558735 TYW1BQ6NUM6 668 aa13.22□□□□□ -0.29
CASC4-205ENST00000558735 POTEBQ6S5H4 581 aa13.22□□□□□ -0.29
CASC4-205ENST00000558735 GIMAP8Q8ND71 665 aaPredicted RBP13.22□□□□□ -0.29
CASC4-205ENST00000558735 NEK9Q8TD19 979 aa13.22□□□□□ -0.29
CASC4-205ENST00000558735 FAM217BQ9NTX9 383 aaPredicted RBP13.22□□□□□ -0.29
CASC4-205ENST00000558735 V9GY48 417 aaPredicted RBP13.22□□□□□ -0.29
CASC4-205ENST00000558735 MAFGO15525 162 aa13.21□□□□□ -0.29
CASC4-205ENST00000558735 GNAT1P11488 350 aa13.21□□□□□ -0.29
CASC4-205ENST00000558735 TCF7P36402 384 aaPredicted RBP13.21□□□□□ -0.29
CASC4-205ENST00000558735 WWC2Q6AWC2 1192 aa13.21□□□□□ -0.29
CASC4-205ENST00000558735 HEATR3Q7Z4Q2 680 aa13.21□□□□□ -0.29
CASC4-205ENST00000558735 CYP2W1Q8TAV3 490 aa13.21□□□□□ -0.29
CASC4-205ENST00000558735 SEPT1Q8WYJ6 367 aa13.21□□□□□ -0.29
CASC4-205ENST00000558735 JADE2Q9NQC1 790 aa13.21□□□□□ -0.29
CASC4-205ENST00000558735 RBM28Q9NW13 759 aaKnown RBP13.21□□□□□ -0.29
CASC4-205ENST00000558735 EMSYQ7Z589 1322 aa13.2□□□□□ -0.3
CASC4-205ENST00000558735 SPDYE3A6NKU9 549 aa13.2□□□□□ -0.3
CASC4-205ENST00000558735 ZBTB43O43298 467 aa13.2□□□□□ -0.3
CASC4-205ENST00000558735 CDC45O75419 566 aa13.2□□□□□ -0.3
CASC4-205ENST00000558735 KCNA5P22460 613 aa13.2□□□□□ -0.3
CASC4-205ENST00000558735 CDC27P30260 824 aa13.2□□□□□ -0.3
CASC4-205ENST00000558735 MRE11P49959 708 aa13.2□□□□□ -0.3
CASC4-205ENST00000558735 HTRA4P83105 476 aaPredicted RBP13.2□□□□□ -0.3
CASC4-205ENST00000558735 RTN1Q16799 776 aa13.2□□□□□ -0.3
CASC4-205ENST00000558735 FAM26DQ5JW98 314 aa13.2□□□□□ -0.3
CASC4-205ENST00000558735 PTCRAQ6ISU1 281 aaPredicted RBP13.2□□□□□ -0.3
CASC4-205ENST00000558735 FAM117BQ6P1L5 589 aa13.2□□□□□ -0.3
CASC4-205ENST00000558735 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
CASC4-205ENST00000558735 LMBR1Q8WVP7 490 aa13.2□□□□□ -0.3
CASC4-205ENST00000558735 KCNB2Q92953 911 aa13.2□□□□□ -0.3
CASC4-205ENST00000558735 MRPL38Q96DV4 380 aaKnown RBP13.2□□□□□ -0.3
CASC4-205ENST00000558735 CDHR1Q96JP9 859 aa13.2□□□□□ -0.3
CASC4-205ENST00000558735 RIC8AQ9NPQ8 531 aa13.2□□□□□ -0.3
CASC4-205ENST00000558735 PKD2L1Q9P0L9 805 aa13.2□□□□□ -0.3
CASC4-205ENST00000558735 ZNF215Q9UL58 517 aaPredicted RBP13.2□□□□□ -0.3
CASC4-205ENST00000558735 INSL6Q9Y581 213 aa13.2□□□□□ -0.3
CASC4-205ENST00000558735 CNTNAP5Q8WYK1 1306 aa13.19□□□□□ -0.3
CASC4-205ENST00000558735 NRCAMQ92823 1304 aa13.19□□□□□ -0.3
CASC4-205ENST00000558735 CAND2O75155 1236 aa13.19□□□□□ -0.3
CASC4-205ENST00000558735 CHRNA1P02708 482 aa13.19□□□□□ -0.3
CASC4-205ENST00000558735 CTSHP09668 335 aa13.19□□□□□ -0.3
CASC4-205ENST00000558735 CPA1P15085 419 aa13.19□□□□□ -0.3
CASC4-205ENST00000558735 ADD1P35611 737 aaKnown RBP13.19□□□□□ -0.3
CASC4-205ENST00000558735 ARHGAP4P98171 946 aa13.19□□□□□ -0.3
CASC4-205ENST00000558735 NHLH1Q02575 133 aa13.19□□□□□ -0.3
CASC4-205ENST00000558735 MTMR1Q13613 665 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms