RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 KAT6AQ92794 2004 aa19.71■□□□□ 0.75
TPM1-214ENST00000558544 GSTTP1A0A1W2PQM5 241 aa19.7■□□□□ 0.74
TPM1-214ENST00000558544 BAG4O95429 457 aaKnown RBP19.7■□□□□ 0.74
TPM1-214ENST00000558544 TCF7P36402 384 aaPredicted RBP19.7■□□□□ 0.74
TPM1-214ENST00000558544 KRT76Q01546 638 aa19.7■□□□□ 0.74
TPM1-214ENST00000558544 UTP14CQ5TAP6 766 aaKnown RBP19.7■□□□□ 0.74
TPM1-214ENST00000558544 SEPT1Q8WYJ6 367 aa19.7■□□□□ 0.74
TPM1-214ENST00000558544 GLT1D1Q96MS3 346 aa19.7■□□□□ 0.74
TPM1-214ENST00000558544 UNC45AQ9H3U1 944 aa19.7■□□□□ 0.74
TPM1-214ENST00000558544 ZSCAN16Q9H4T2 348 aaPredicted RBP19.7■□□□□ 0.74
TPM1-214ENST00000558544 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.7■□□□□ 0.74
TPM1-214ENST00000558544 DAXXQ9UER7 740 aaPredicted RBP19.7■□□□□ 0.74
TPM1-214ENST00000558544 KPNA6O60684 536 aa19.7■□□□□ 0.74
TPM1-214ENST00000558544 PPFIA4O75335 1185 aa19.7■□□□□ 0.74
TPM1-214ENST00000558544 F13A1P00488 732 aa19.7■□□□□ 0.74
TPM1-214ENST00000558544 LGALS2P05162 132 aa19.7■□□□□ 0.74
TPM1-214ENST00000558544 ZNF746Q6NUN9 644 aaPredicted RBP19.7■□□□□ 0.74
TPM1-214ENST00000558544 SLFN12Q8IYM2 578 aa19.7■□□□□ 0.74
TPM1-214ENST00000558544 VTI1AQ96AJ9 217 aa19.7■□□□□ 0.74
TPM1-214ENST00000558544 MTMR9Q96QG7 549 aa19.7■□□□□ 0.74
TPM1-214ENST00000558544 MTG1Q9BT17 334 aaPredicted RBP19.7■□□□□ 0.74
TPM1-214ENST00000558544 STARD7Q9NQZ5 370 aa19.7■□□□□ 0.74
TPM1-214ENST00000558544 VAV3Q9UKW4 847 aa19.7■□□□□ 0.74
TPM1-214ENST00000558544 OR52Z1P0C646 297 aa19.69■□□□□ 0.74
TPM1-214ENST00000558544 TXKP42681 527 aa19.69■□□□□ 0.74
TPM1-214ENST00000558544 ATN1P54259 1190 aaPredicted RBP19.69■□□□□ 0.74
TPM1-214ENST00000558544 CHMP4BP1P59074 171 aa19.69■□□□□ 0.74
TPM1-214ENST00000558544 PSMC6P62333 389 aa19.69■□□□□ 0.74
TPM1-214ENST00000558544 TRIM50Q86XT4 487 aa19.69■□□□□ 0.74
TPM1-214ENST00000558544 TCHHQ07283 1943 aa19.68■□□□□ 0.74
TPM1-214ENST00000558544 TRIP12Q14669 1992 aaPredicted RBP19.68■□□□□ 0.74
TPM1-214ENST00000558544 CABYRO75952 493 aa19.68■□□□□ 0.74
TPM1-214ENST00000558544 ATG7O95352 703 aa19.68■□□□□ 0.74
TPM1-214ENST00000558544 F2P00734 622 aa19.68■□□□□ 0.74
TPM1-214ENST00000558544 PTGDRQ13258 359 aa19.68■□□□□ 0.74
TPM1-214ENST00000558544 ABHD15Q6UXT9 468 aa19.68■□□□□ 0.74
TPM1-214ENST00000558544 SMAP1Q8IYB5 467 aaPredicted RBP19.68■□□□□ 0.74
TPM1-214ENST00000558544 C4orf32Q8N8J7 132 aa19.68■□□□□ 0.74
TPM1-214ENST00000558544 PPP1R13LQ8WUF5 828 aa19.68■□□□□ 0.74
TPM1-214ENST00000558544 KAT2BQ92831 832 aa19.68■□□□□ 0.74
TPM1-214ENST00000558544 C16orf70Q9BSU1 422 aa19.68■□□□□ 0.74
TPM1-214ENST00000558544 SAMM50Q9Y512 469 aa19.68■□□□□ 0.74
TPM1-214ENST00000558544 WDR64B1ANS9 1081 aa19.67■□□□□ 0.74
TPM1-214ENST00000558544 BRD1O95696 1058 aa19.67■□□□□ 0.74
TPM1-214ENST00000558544 SUPT20HL2P0C7V6 817 aa19.67■□□□□ 0.74
TPM1-214ENST00000558544 PPP2R5CQ13362 524 aa19.67■□□□□ 0.74
TPM1-214ENST00000558544 MIS18BP1Q6P0N0 1132 aa19.67■□□□□ 0.74
TPM1-214ENST00000558544 B3GNT9Q6UX72 402 aa19.67■□□□□ 0.74
TPM1-214ENST00000558544 MIER3Q7Z3K6 550 aa19.67■□□□□ 0.74
TPM1-214ENST00000558544 PCYT2Q99447 389 aa19.67■□□□□ 0.74
TPM1-214ENST00000558544 FTOQ9C0B1 505 aaKnown RBP eCLIP19.67■□□□□ 0.74
TPM1-214ENST00000558544 TTC12Q9H892 705 aaPredicted RBP19.67■□□□□ 0.74
TPM1-214ENST00000558544 DISC1Q9NRI5 854 aa19.67■□□□□ 0.74
TPM1-214ENST00000558544 ZDHHC9Q9Y397 364 aa19.67■□□□□ 0.74
TPM1-214ENST00000558544 EMSYQ7Z589 1322 aa19.67■□□□□ 0.74
TPM1-214ENST00000558544 A0A0U1RQG5 324 aaPredicted RBP19.66■□□□□ 0.74
TPM1-214ENST00000558544 BACH1O14867 736 aa19.66■□□□□ 0.74
TPM1-214ENST00000558544 LGR5O75473 907 aa19.66■□□□□ 0.74
TPM1-214ENST00000558544 SFNP31947 248 aa19.66■□□□□ 0.74
TPM1-214ENST00000558544 PSEN2P49810 448 aa19.66■□□□□ 0.74
TPM1-214ENST00000558544 JAK3P52333 1124 aa19.66■□□□□ 0.74
TPM1-214ENST00000558544 SPIRE1Q08AE8 756 aa19.66■□□□□ 0.74
TPM1-214ENST00000558544 MFSD10Q14728 455 aa19.66■□□□□ 0.74
TPM1-214ENST00000558544 SF3A1Q15459 793 aaKnown RBP19.66■□□□□ 0.74
TPM1-214ENST00000558544 FOXD4L6Q3SYB3 417 aaPredicted RBP19.66■□□□□ 0.74
TPM1-214ENST00000558544 NCAPH2Q6IBW4 605 aa19.66■□□□□ 0.74
TPM1-214ENST00000558544 FOXD4L3Q6VB84 417 aaPredicted RBP19.66■□□□□ 0.74
TPM1-214ENST00000558544 SLC39A5Q6ZMH5 540 aa19.66■□□□□ 0.74
TPM1-214ENST00000558544 CCDC60Q8IWA6 550 aaPredicted RBP19.66■□□□□ 0.74
TPM1-214ENST00000558544 GLG1Q92896 1179 aa19.66■□□□□ 0.74
TPM1-214ENST00000558544 KATNAL1Q9BW62 490 aa19.66■□□□□ 0.74
TPM1-214ENST00000558544 PCDHA12Q9UN75 941 aa19.66■□□□□ 0.74
TPM1-214ENST00000558544 PCDHA10Q9Y5I2 948 aa19.66■□□□□ 0.74
TPM1-214ENST00000558544 H3BRB1 525 aa19.65■□□□□ 0.74
TPM1-214ENST00000558544 EML1O00423 815 aa19.65■□□□□ 0.74
TPM1-214ENST00000558544 PSAPP07602 524 aa19.65■□□□□ 0.74
TPM1-214ENST00000558544 DDIT3P35638 169 aa19.65■□□□□ 0.74
TPM1-214ENST00000558544 ATP2C1P98194 919 aaPredicted RBP19.65■□□□□ 0.74
TPM1-214ENST00000558544 ITGA7Q13683 1181 aa19.65■□□□□ 0.74
TPM1-214ENST00000558544 KIAA0753Q2KHM9 967 aa19.65■□□□□ 0.74
TPM1-214ENST00000558544 NBPF20Q3BBV1 942 aa19.65■□□□□ 0.74
TPM1-214ENST00000558544 SMARCAD1Q9H4L7 1026 aa19.65■□□□□ 0.74
TPM1-214ENST00000558544 TUT1Q9H6E5 874 aaKnown RBP19.65■□□□□ 0.74
TPM1-214ENST00000558544 AZI2Q9H6S1 392 aa19.65■□□□□ 0.74
TPM1-214ENST00000558544 ZNF302Q9NR11 478 aa19.65■□□□□ 0.74
TPM1-214ENST00000558544 ZNF215Q9UL58 517 aaPredicted RBP19.65■□□□□ 0.74
TPM1-214ENST00000558544 CLIC4Q9Y696 253 aa19.65■□□□□ 0.74
TPM1-214ENST00000558544 GRIN2DO15399 1336 aa19.65■□□□□ 0.74
TPM1-214ENST00000558544 ARID2Q68CP9 1835 aa19.64■□□□□ 0.73
TPM1-214ENST00000558544 IGKV6D-21A0A0A0MT36 114 aa19.64■□□□□ 0.73
TPM1-214ENST00000558544 POTEMA6NI47 508 aa19.64■□□□□ 0.73
TPM1-214ENST00000558544 HAS3O00219 553 aa19.64■□□□□ 0.73
TPM1-214ENST00000558544 LAD1O00515 517 aa19.64■□□□□ 0.73
TPM1-214ENST00000558544 MARK3P27448 753 aa19.64■□□□□ 0.73
TPM1-214ENST00000558544 CEBPZQ03701 1054 aaKnown RBP19.64■□□□□ 0.73
TPM1-214ENST00000558544 LRRC26Q2I0M4 334 aa19.64■□□□□ 0.73
TPM1-214ENST00000558544 FAM47CQ5HY64 1035 aa19.64■□□□□ 0.73
TPM1-214ENST00000558544 FAM160B1Q5W0V3 765 aa19.64■□□□□ 0.73
TPM1-214ENST00000558544 SWSAP1Q6NVH7 229 aa19.64■□□□□ 0.73
TPM1-214ENST00000558544 RDM1Q8NG50 284 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms