RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 RMDN3Q96TC7 470 aa7.92□□□□□ -1.14
LRRC28-207ENST00000558500 SEC62Q99442 399 aaKnown RBP7.92□□□□□ -1.14
LRRC28-207ENST00000558500 TMEM47Q9BQJ4 181 aa7.92□□□□□ -1.14
LRRC28-207ENST00000558500 PLVAPQ9BX97 442 aa7.92□□□□□ -1.14
LRRC28-207ENST00000558500 LRRCC1Q9C099 1032 aa7.92□□□□□ -1.14
LRRC28-207ENST00000558500 COL20A1Q9P218 1284 aa7.92□□□□□ -1.14
LRRC28-207ENST00000558500 PLAGL2Q9UPG8 496 aa7.92□□□□□ -1.14
LRRC28-207ENST00000558500 DMDP11532 3685 aa7.92□□□□□ -1.14
LRRC28-207ENST00000558500 TREHO43280 583 aa7.91□□□□□ -1.14
LRRC28-207ENST00000558500 ORC4O43929 436 aa7.91□□□□□ -1.14
LRRC28-207ENST00000558500 SMARCA5O60264 1052 aaPredicted RBP7.91□□□□□ -1.14
LRRC28-207ENST00000558500 EIF3JO75822 258 aaKnown RBP7.91□□□□□ -1.14
LRRC28-207ENST00000558500 GLP2RO95838 553 aa7.91□□□□□ -1.14
LRRC28-207ENST00000558500 PDGFBP01127 241 aaPredicted RBP7.91□□□□□ -1.14
LRRC28-207ENST00000558500 SMIM10L2AP0DMW4 78 aa7.91□□□□□ -1.14
LRRC28-207ENST00000558500 SMIM10L2BP0DMW5 78 aa7.91□□□□□ -1.14
LRRC28-207ENST00000558500 PDHBP11177 359 aa7.91□□□□□ -1.14
LRRC28-207ENST00000558500 ATF7P17544 494 aaPredicted RBP7.91□□□□□ -1.14
LRRC28-207ENST00000558500 DNAJB1P25685 340 aa7.91□□□□□ -1.14
LRRC28-207ENST00000558500 ZNF543Q08ER8 600 aa7.91□□□□□ -1.14
LRRC28-207ENST00000558500 BTG3Q14201 252 aaPredicted RBP7.91□□□□□ -1.14
LRRC28-207ENST00000558500 HSDL1Q3SXM5 330 aa7.91□□□□□ -1.14
LRRC28-207ENST00000558500 MYSM1Q5VVJ2 828 aa7.91□□□□□ -1.14
LRRC28-207ENST00000558500 ADGRD2Q7Z7M1 963 aa7.91□□□□□ -1.14
LRRC28-207ENST00000558500 P2RX5Q93086 422 aa7.91□□□□□ -1.14
LRRC28-207ENST00000558500 ZNF689Q96CS4 500 aaPredicted RBP7.91□□□□□ -1.14
LRRC28-207ENST00000558500 C16orf70Q9BSU1 422 aa7.91□□□□□ -1.14
LRRC28-207ENST00000558500 RNPEPQ9H4A4 650 aa7.91□□□□□ -1.14
LRRC28-207ENST00000558500 ANAPC4Q9UJX5 808 aa7.91□□□□□ -1.14
LRRC28-207ENST00000558500 BARX2Q9UMQ3 279 aaPredicted RBP7.91□□□□□ -1.14
LRRC28-207ENST00000558500 MYH4Q9Y623 1939 aa7.91□□□□□ -1.14
LRRC28-207ENST00000558500 ZNF292O60281 2723 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 ABCB11O95342 1321 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 C2orf72A6NCS6 295 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 FOXP2O15409 715 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 SORBS3O60504 671 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 RGS20O76081 388 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 ITGB1P05556 798 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 NR3C2P08235 984 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 FGRP09769 529 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 SNHG28P0DPA3 235 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 EIF2AK2P19525 551 aaKnown RBP7.9□□□□□ -1.14
LRRC28-207ENST00000558500 NRIP1P48552 1158 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 NAALADL2Q58DX5 795 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 FAM26DQ5JW98 314 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 CELF3Q5SZQ8 465 aaKnown RBP7.9□□□□□ -1.14
LRRC28-207ENST00000558500 ARHGEF16Q5VV41 709 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 TSHZ3Q63HK5 1081 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 RBM23Q86U06 439 aaKnown RBP7.9□□□□□ -1.14
LRRC28-207ENST00000558500 MCF2L2Q86YR7 1114 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 SPPL3Q8TCT6 385 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 SUSD6Q92537 303 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 NKD2Q969F2 451 aaPredicted RBP7.9□□□□□ -1.14
LRRC28-207ENST00000558500 RIPOR3Q96MK2 946 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 SPATA33Q96N06 139 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 ZBTB40Q9NUA8 1239 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 TCP11L1Q9NUJ3 509 aa7.9□□□□□ -1.14
LRRC28-207ENST00000558500 CACNA1BQ00975 2339 aa7.89□□□□□ -1.15
LRRC28-207ENST00000558500 H3BRB1 525 aa7.89□□□□□ -1.15
LRRC28-207ENST00000558500 ENPP3O14638 875 aa7.89□□□□□ -1.15
LRRC28-207ENST00000558500 DGKIO75912 1065 aa7.89□□□□□ -1.15
LRRC28-207ENST00000558500 GGPS1O95749 300 aa7.89□□□□□ -1.15
LRRC28-207ENST00000558500 ZMYM1Q5SVZ6 1142 aa7.89□□□□□ -1.15
LRRC28-207ENST00000558500 GPATCH4Q5T3I0 446 aaKnown RBP7.89□□□□□ -1.15
LRRC28-207ENST00000558500 KCNV1Q6PIU1 500 aa7.89□□□□□ -1.15
LRRC28-207ENST00000558500 FRMD5Q7Z6J6 570 aa7.89□□□□□ -1.15
LRRC28-207ENST00000558500 ZBTB33Q86T24 672 aa7.89□□□□□ -1.15
LRRC28-207ENST00000558500 ADSSL1Q8N142 457 aa7.89□□□□□ -1.15
LRRC28-207ENST00000558500 TMEM105Q8N8V8 129 aa7.89□□□□□ -1.15
LRRC28-207ENST00000558500 POF1BQ8WVV4 589 aa7.89□□□□□ -1.15
LRRC28-207ENST00000558500 GPATCH3Q96I76 525 aa7.89□□□□□ -1.15
LRRC28-207ENST00000558500 CPVLQ9H3G5 476 aa7.89□□□□□ -1.15
LRRC28-207ENST00000558500 TUT1Q9H6E5 874 aaKnown RBP7.89□□□□□ -1.15
LRRC28-207ENST00000558500 PXMP2Q9NR77 195 aa7.89□□□□□ -1.15
LRRC28-207ENST00000558500 SETD4Q9NVD3 440 aa7.89□□□□□ -1.15
LRRC28-207ENST00000558500 MRPL42Q9Y6G3 142 aaKnown RBP7.89□□□□□ -1.15
LRRC28-207ENST00000558500 TRIP12Q14669 1992 aaPredicted RBP7.89□□□□□ -1.15
LRRC28-207ENST00000558500 C5orf42Q9H799 3197 aa7.89□□□□□ -1.15
LRRC28-207ENST00000558500 EP300Q09472 2414 aaPredicted RBP7.89□□□□□ -1.15
LRRC28-207ENST00000558500 MICAL3Q7RTP6 2002 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 KMT2EQ8IZD2 1858 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 WDR87Q6ZQQ6 2873 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 MED19A0JLT2 244 aaPredicted RBP7.88□□□□□ -1.15
LRRC28-207ENST00000558500 LGALS2P05162 132 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 GOLGA8HP0CJ92 632 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 HSPD1P10809 573 aaKnown RBP7.88□□□□□ -1.15
LRRC28-207ENST00000558500 GHRP10912 638 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 GNAT1P11488 350 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 UBA1P22314 1058 aaKnown RBP7.88□□□□□ -1.15
LRRC28-207ENST00000558500 ADAM17P78536 824 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 SP2Q02086 613 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 CDC37Q16543 378 aaPredicted RBP7.88□□□□□ -1.15
LRRC28-207ENST00000558500 MCTP2Q6DN12 878 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 CMTR2Q8IYT2 770 aaKnown RBP7.88□□□□□ -1.15
LRRC28-207ENST00000558500 KLHL23Q8NBE8 558 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 VN1R2Q8NFZ6 395 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 ATP8B4Q8TF62 1192 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 PDCD2LQ9BRP1 358 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 UBA5Q9GZZ9 404 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 TLE6Q9H808 572 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms