RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 ATG7O95352 703 aa14.15□□□□□ -0.14
LRRC28-206ENST00000558471 CD4P01730 458 aa14.15□□□□□ -0.14
LRRC28-206ENST00000558471 GCFC2P16383 781 aaKnown RBP14.15□□□□□ -0.14
LRRC28-206ENST00000558471 SYN1P17600 705 aa14.15□□□□□ -0.14
LRRC28-206ENST00000558471 KIAA0753Q2KHM9 967 aa14.15□□□□□ -0.14
LRRC28-206ENST00000558471 FAM47CQ5HY64 1035 aa14.15□□□□□ -0.14
LRRC28-206ENST00000558471 LARP1BQ659C4 914 aaKnown RBP14.15□□□□□ -0.14
LRRC28-206ENST00000558471 SH3RF1Q7Z6J0 888 aa14.15□□□□□ -0.14
LRRC28-206ENST00000558471 TRIM50Q86XT4 487 aa14.15□□□□□ -0.14
LRRC28-206ENST00000558471 HSCBQ8IWL3 235 aa14.15□□□□□ -0.14
LRRC28-206ENST00000558471 ETNPPLQ8TBG4 499 aa14.15□□□□□ -0.14
LRRC28-206ENST00000558471 INTS4Q96HW7 963 aaKnown RBP14.15□□□□□ -0.14
LRRC28-206ENST00000558471 PCYT2Q99447 389 aa14.15□□□□□ -0.14
LRRC28-206ENST00000558471 NAP1L4Q99733 375 aaKnown RBP14.15□□□□□ -0.14
LRRC28-206ENST00000558471 KATNAL1Q9BW62 490 aa14.15□□□□□ -0.14
LRRC28-206ENST00000558471 TRPV6Q9H1D0 765 aa14.15□□□□□ -0.14
LRRC28-206ENST00000558471 TUT1Q9H6E5 874 aaKnown RBP14.15□□□□□ -0.14
LRRC28-206ENST00000558471 FOXD4L1Q9NU39 408 aa14.15□□□□□ -0.14
LRRC28-206ENST00000558471 ZMYND8Q9ULU4 1186 aaPredicted RBP14.15□□□□□ -0.14
LRRC28-206ENST00000558471 CEP290O15078 2479 aa14.15□□□□□ -0.14
LRRC28-206ENST00000558471 B4GALT4O60513 344 aa14.14□□□□□ -0.15
LRRC28-206ENST00000558471 CLTBP09497 229 aa14.14□□□□□ -0.15
LRRC28-206ENST00000558471 ATP2B1P20020 1258 aa14.14□□□□□ -0.15
LRRC28-206ENST00000558471 U2AF2P26368 475 aaKnown RBP eCLIP14.14□□□□□ -0.15
LRRC28-206ENST00000558471 PTPN11Q06124 597 aaPredicted RBP14.14□□□□□ -0.15
LRRC28-206ENST00000558471 GNL2Q13823 731 aaKnown RBP14.14□□□□□ -0.15
LRRC28-206ENST00000558471 LRCH2Q5VUJ6 765 aa14.14□□□□□ -0.15
LRRC28-206ENST00000558471 ABHD15Q6UXT9 468 aa14.14□□□□□ -0.15
LRRC28-206ENST00000558471 NOSTRINQ8IVI9 506 aa14.14□□□□□ -0.15
LRRC28-206ENST00000558471 RIT2Q99578 217 aa14.14□□□□□ -0.15
LRRC28-206ENST00000558471 PRDM5Q9NQX1 630 aaPredicted RBP14.14□□□□□ -0.15
LRRC28-206ENST00000558471 PDLIM7Q9NR12 457 aa14.14□□□□□ -0.15
LRRC28-206ENST00000558471 TRMT13Q9NUP7 481 aaKnown RBP14.14□□□□□ -0.15
LRRC28-206ENST00000558471 TMEM39AQ9NV64 488 aa14.14□□□□□ -0.15
LRRC28-206ENST00000558471 HDAC6Q9UBN7 1215 aa14.14□□□□□ -0.15
LRRC28-206ENST00000558471 IGKV6D-21A0A0A0MT36 114 aa14.13□□□□□ -0.15
LRRC28-206ENST00000558471 TRIM43BA6NCK2 446 aa14.13□□□□□ -0.15
LRRC28-206ENST00000558471 H3BQV1 296 aa14.13□□□□□ -0.15
LRRC28-206ENST00000558471 TLR3O15455 904 aaKnown RBP14.13□□□□□ -0.15
LRRC28-206ENST00000558471 GAS7O60861 476 aa14.13□□□□□ -0.15
LRRC28-206ENST00000558471 LGR5O75473 907 aa14.13□□□□□ -0.15
LRRC28-206ENST00000558471 PSMD10O75832 226 aa14.13□□□□□ -0.15
LRRC28-206ENST00000558471 KRT76Q01546 638 aa14.13□□□□□ -0.15
LRRC28-206ENST00000558471 MCTP1Q6DN14 999 aa14.13□□□□□ -0.15
LRRC28-206ENST00000558471 ZNF746Q6NUN9 644 aaPredicted RBP14.13□□□□□ -0.15
LRRC28-206ENST00000558471 SESTD1Q86VW0 696 aa14.13□□□□□ -0.15
LRRC28-206ENST00000558471 C7orf31Q8N865 590 aa14.13□□□□□ -0.15
LRRC28-206ENST00000558471 HAS1Q92839 578 aa14.13□□□□□ -0.15
LRRC28-206ENST00000558471 GLG1Q92896 1179 aa14.13□□□□□ -0.15
LRRC28-206ENST00000558471 TRIM43Q96BQ3 446 aaPredicted RBP14.13□□□□□ -0.15
LRRC28-206ENST00000558471 RNPEPQ9H4A4 650 aa14.13□□□□□ -0.15
LRRC28-206ENST00000558471 SMARCAD1Q9H4L7 1026 aa14.13□□□□□ -0.15
LRRC28-206ENST00000558471 KCNMB3Q9NPA1 279 aa14.13□□□□□ -0.15
LRRC28-206ENST00000558471 GTF2IRD1Q9UHL9 959 aa14.13□□□□□ -0.15
LRRC28-206ENST00000558471 KIAA0355O15063 1070 aa14.12□□□□□ -0.15
LRRC28-206ENST00000558471 TBX3O15119 743 aa14.12□□□□□ -0.15
LRRC28-206ENST00000558471 SUPT20HL2P0C7V6 817 aa14.12□□□□□ -0.15
LRRC28-206ENST00000558471 ITGB8P26012 769 aa14.12□□□□□ -0.15
LRRC28-206ENST00000558471 STAT5BP51692 787 aa14.12□□□□□ -0.15
LRRC28-206ENST00000558471 HIC1Q14526 733 aa14.12□□□□□ -0.15
LRRC28-206ENST00000558471 GDF6Q6KF10 455 aaPredicted RBP14.12□□□□□ -0.15
LRRC28-206ENST00000558471 SWSAP1Q6NVH7 229 aa14.12□□□□□ -0.15
LRRC28-206ENST00000558471 MIS18BP1Q6P0N0 1132 aa14.12□□□□□ -0.15
LRRC28-206ENST00000558471 POTEDQ86YR6 584 aa14.12□□□□□ -0.15
LRRC28-206ENST00000558471 SMAP1Q8IYB5 467 aaPredicted RBP14.12□□□□□ -0.15
LRRC28-206ENST00000558471 FAM20AQ96MK3 541 aa14.12□□□□□ -0.15
LRRC28-206ENST00000558471 TEKT3Q9BXF9 490 aa14.12□□□□□ -0.15
LRRC28-206ENST00000558471 UNC45AQ9H3U1 944 aa14.12□□□□□ -0.15
LRRC28-206ENST00000558471 AZI2Q9H6S1 392 aa14.12□□□□□ -0.15
LRRC28-206ENST00000558471 ERAP1Q9NZ08 941 aa14.12□□□□□ -0.15
LRRC28-206ENST00000558471 PRKAG2Q9UGJ0 569 aa14.12□□□□□ -0.15
LRRC28-206ENST00000558471 TBX21Q9UL17 535 aa14.12□□□□□ -0.15
LRRC28-206ENST00000558471 ZNF215Q9UL58 517 aaPredicted RBP14.12□□□□□ -0.15
LRRC28-206ENST00000558471 EMSYQ7Z589 1322 aa14.12□□□□□ -0.15
LRRC28-206ENST00000558471 LTBP2Q14767 1821 aa14.11□□□□□ -0.15
LRRC28-206ENST00000558471 SMIM10L2AP0DMW4 78 aa14.11□□□□□ -0.15
LRRC28-206ENST00000558471 SMIM10L2BP0DMW5 78 aa14.11□□□□□ -0.15
LRRC28-206ENST00000558471 CYP2C9P11712 490 aa14.11□□□□□ -0.15
LRRC28-206ENST00000558471 MARK3P27448 753 aa14.11□□□□□ -0.15
LRRC28-206ENST00000558471 MCM7P33993 719 aa14.11□□□□□ -0.15
LRRC28-206ENST00000558471 TOB1P50616 345 aaPredicted RBP14.11□□□□□ -0.15
LRRC28-206ENST00000558471 ZNF200P98182 395 aaPredicted RBP14.11□□□□□ -0.15
LRRC28-206ENST00000558471 ZNF174Q15697 407 aa14.11□□□□□ -0.15
LRRC28-206ENST00000558471 B3GNT9Q6UX72 402 aa14.11□□□□□ -0.15
LRRC28-206ENST00000558471 PLPPR4Q7Z2D5 763 aa14.11□□□□□ -0.15
LRRC28-206ENST00000558471 CCDC60Q8IWA6 550 aaPredicted RBP14.11□□□□□ -0.15
LRRC28-206ENST00000558471 CTAGE1Q96RT6 745 aa14.11□□□□□ -0.15
LRRC28-206ENST00000558471 DISC1Q9NRI5 854 aa14.11□□□□□ -0.15
LRRC28-206ENST00000558471 TCEAL9Q9UHQ7 104 aa14.11□□□□□ -0.15
LRRC28-206ENST00000558471 SAMM50Q9Y512 469 aa14.11□□□□□ -0.15
LRRC28-206ENST00000558471 PCDHA10Q9Y5I2 948 aa14.11□□□□□ -0.15
LRRC28-206ENST00000558471 WDR64B1ANS9 1081 aa14.1□□□□□ -0.15
LRRC28-206ENST00000558471 BACH1O14867 736 aa14.1□□□□□ -0.15
LRRC28-206ENST00000558471 CHMP2AO43633 222 aa14.1□□□□□ -0.15
LRRC28-206ENST00000558471 MARCH6O60337 910 aa14.1□□□□□ -0.15
LRRC28-206ENST00000558471 NEMFO60524 1076 aa14.1□□□□□ -0.15
LRRC28-206ENST00000558471 PSAPP07602 524 aa14.1□□□□□ -0.15
LRRC28-206ENST00000558471 PDCP20941 246 aa14.1□□□□□ -0.15
LRRC28-206ENST00000558471 SYT1P21579 422 aa14.1□□□□□ -0.15
LRRC28-206ENST00000558471 TRAPPC10P48553 1259 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms