RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 ELP1O95163 1332 aa23.98■■□□□ 1.43
CASC4-204ENST00000557945 FRMPD3Q5JV73 1810 aa23.98■■□□□ 1.43
CASC4-204ENST00000557945 ATP2C1P98194 919 aaPredicted RBP23.98■■□□□ 1.43
CASC4-204ENST00000557945 DNM1Q05193 864 aaKnown RBP23.98■■□□□ 1.43
CASC4-204ENST00000557945 VAV3Q9UKW4 847 aa23.98■■□□□ 1.43
CASC4-204ENST00000557945 GSTTP1A0A1W2PQM5 241 aa23.97■■□□□ 1.43
CASC4-204ENST00000557945 DNM1LO00429 736 aa23.97■■□□□ 1.43
CASC4-204ENST00000557945 PPFIA4O75335 1185 aa23.97■■□□□ 1.43
CASC4-204ENST00000557945 EN2P19622 333 aaPredicted RBP23.97■■□□□ 1.43
CASC4-204ENST00000557945 TCF7P36402 384 aaPredicted RBP23.97■■□□□ 1.43
CASC4-204ENST00000557945 TECP42680 631 aa23.97■■□□□ 1.43
CASC4-204ENST00000557945 TMEM266Q2M3C6 531 aa23.97■■□□□ 1.43
CASC4-204ENST00000557945 UTP14CQ5TAP6 766 aaKnown RBP23.97■■□□□ 1.43
CASC4-204ENST00000557945 WDR64B1ANS9 1081 aa23.96■■□□□ 1.43
CASC4-204ENST00000557945 KPNA6O60684 536 aa23.96■■□□□ 1.43
CASC4-204ENST00000557945 ASGR1P07306 291 aa23.96■■□□□ 1.43
CASC4-204ENST00000557945 NCLP19338 710 aaKnown RBP23.96■■□□□ 1.43
CASC4-204ENST00000557945 PPP2R5CQ13362 524 aa23.96■■□□□ 1.43
CASC4-204ENST00000557945 STK38Q15208 465 aa23.96■■□□□ 1.43
CASC4-204ENST00000557945 ATL3Q6DD88 541 aa23.96■■□□□ 1.43
CASC4-204ENST00000557945 NCAPH2Q6IBW4 605 aa23.96■■□□□ 1.43
CASC4-204ENST00000557945 CCSAPQ6IQ19 270 aaPredicted RBP23.96■■□□□ 1.43
CASC4-204ENST00000557945 MIS18BP1Q6P0N0 1132 aa23.96■■□□□ 1.43
CASC4-204ENST00000557945 CXCL17Q6UXB2 119 aa23.96■■□□□ 1.43
CASC4-204ENST00000557945 DTHD1Q6ZMT9 781 aa23.96■■□□□ 1.43
CASC4-204ENST00000557945 MIER3Q7Z3K6 550 aa23.96■■□□□ 1.43
CASC4-204ENST00000557945 SMAP1Q8IYB5 467 aaPredicted RBP23.96■■□□□ 1.43
CASC4-204ENST00000557945 TSEN34Q9BSV6 310 aaKnown RBP23.96■■□□□ 1.43
CASC4-204ENST00000557945 DISC1Q9NRI5 854 aa23.96■■□□□ 1.43
CASC4-204ENST00000557945 POLR3EQ9NVU0 708 aa23.96■■□□□ 1.43
CASC4-204ENST00000557945 BACH1O14867 736 aa23.95■■□□□ 1.42
CASC4-204ENST00000557945 ZNF286BP0CG31 522 aa23.95■■□□□ 1.42
CASC4-204ENST00000557945 CAPN2P17655 700 aa23.95■■□□□ 1.42
CASC4-204ENST00000557945 PRPHP41219 470 aa23.95■■□□□ 1.42
CASC4-204ENST00000557945 JAK3P52333 1124 aa23.95■■□□□ 1.42
CASC4-204ENST00000557945 ACLYP53396 1101 aa23.95■■□□□ 1.42
CASC4-204ENST00000557945 SOX10P56693 466 aa23.95■■□□□ 1.42
CASC4-204ENST00000557945 PTPAQ15257 358 aa23.95■■□□□ 1.42
CASC4-204ENST00000557945 ANKLE1Q8NAG6 615 aa23.95■■□□□ 1.42
CASC4-204ENST00000557945 CHAMP1Q96JM3 812 aa23.95■■□□□ 1.42
CASC4-204ENST00000557945 CFAP45Q9UL16 551 aa23.95■■□□□ 1.42
CASC4-204ENST00000557945 PCDHA10Q9Y5I2 948 aa23.95■■□□□ 1.42
CASC4-204ENST00000557945 MOXD2PA6NHM9 499 aa23.94■■□□□ 1.42
CASC4-204ENST00000557945 PSAPP07602 524 aa23.94■■□□□ 1.42
CASC4-204ENST00000557945 SUPT20HL2P0C7V6 817 aa23.94■■□□□ 1.42
CASC4-204ENST00000557945 HOXD8P13378 290 aaPredicted RBP23.94■■□□□ 1.42
CASC4-204ENST00000557945 SFNP31947 248 aa23.94■■□□□ 1.42
CASC4-204ENST00000557945 NASPP49321 788 aaPredicted RBP23.94■■□□□ 1.42
CASC4-204ENST00000557945 CHMP4BP1P59074 171 aa23.94■■□□□ 1.42
CASC4-204ENST00000557945 B3GNT9Q6UX72 402 aa23.94■■□□□ 1.42
CASC4-204ENST00000557945 ABHD15Q6UXT9 468 aa23.94■■□□□ 1.42
CASC4-204ENST00000557945 FERMT2Q96AC1 680 aa23.94■■□□□ 1.42
CASC4-204ENST00000557945 EML1O00423 815 aa23.93■■□□□ 1.42
CASC4-204ENST00000557945 ATG7O95352 703 aa23.93■■□□□ 1.42
CASC4-204ENST00000557945 LGALS2P05162 132 aa23.93■■□□□ 1.42
CASC4-204ENST00000557945 MARCKSP29966 332 aaPredicted RBP23.93■■□□□ 1.42
CASC4-204ENST00000557945 KRT85P78386 507 aa23.93■■□□□ 1.42
CASC4-204ENST00000557945 PURAQ00577 322 aaKnown RBP23.93■■□□□ 1.42
CASC4-204ENST00000557945 SPIRE1Q08AE8 756 aa23.93■■□□□ 1.42
CASC4-204ENST00000557945 SLC39A14Q15043 492 aa23.93■■□□□ 1.42
CASC4-204ENST00000557945 ARL6IP4Q66PJ3 421 aaKnown RBP23.93■■□□□ 1.42
CASC4-204ENST00000557945 TRIM50Q86XT4 487 aa23.93■■□□□ 1.42
CASC4-204ENST00000557945 RDM1Q8NG50 284 aa23.93■■□□□ 1.42
CASC4-204ENST00000557945 GLG1Q92896 1179 aa23.93■■□□□ 1.42
CASC4-204ENST00000557945 VTI1AQ96AJ9 217 aa23.93■■□□□ 1.42
CASC4-204ENST00000557945 MTG1Q9BT17 334 aaPredicted RBP23.93■■□□□ 1.42
CASC4-204ENST00000557945 AZI2Q9H6S1 392 aa23.93■■□□□ 1.42
CASC4-204ENST00000557945 PHF24Q9UPV7 400 aa23.93■■□□□ 1.42
CASC4-204ENST00000557945 MYH15Q9Y2K3 1946 aa23.93■■□□□ 1.42
CASC4-204ENST00000557945 VWA3AA6NCI4 1184 aa23.92■■□□□ 1.42
CASC4-204ENST00000557945 POTEMA6NI47 508 aa23.92■■□□□ 1.42
CASC4-204ENST00000557945 FXR2P51116 673 aaKnown RBP eCLIP23.92■■□□□ 1.42
CASC4-204ENST00000557945 IL17AQ16552 155 aa23.92■■□□□ 1.42
CASC4-204ENST00000557945 FAM160B1Q5W0V3 765 aa23.92■■□□□ 1.42
CASC4-204ENST00000557945 SWSAP1Q6NVH7 229 aa23.92■■□□□ 1.42
CASC4-204ENST00000557945 DIS3LQ8TF46 1054 aaKnown RBP23.92■■□□□ 1.42
CASC4-204ENST00000557945 GLT1D1Q96MS3 346 aa23.92■■□□□ 1.42
CASC4-204ENST00000557945 RAB34Q9BZG1 259 aa23.92■■□□□ 1.42
CASC4-204ENST00000557945 YEATS4O95619 227 aa23.91■■□□□ 1.42
CASC4-204ENST00000557945 MNX1P50219 401 aaPredicted RBP23.91■■□□□ 1.42
CASC4-204ENST00000557945 LINC00301Q8NCQ3 95 aa23.91■■□□□ 1.42
CASC4-204ENST00000557945 C16orf70Q9BSU1 422 aa23.91■■□□□ 1.42
CASC4-204ENST00000557945 SMARCAD1Q9H4L7 1026 aa23.91■■□□□ 1.42
CASC4-204ENST00000557945 ZNF302Q9NR11 478 aa23.91■■□□□ 1.42
CASC4-204ENST00000557945 GABBR1Q9UBS5 961 aa23.91■■□□□ 1.42
CASC4-204ENST00000557945 BRCA2P51587 3418 aa23.91■■□□□ 1.42
CASC4-204ENST00000557945 A0A1W2PQ45 241 aaPredicted RBP23.91■■□□□ 1.42
CASC4-204ENST00000557945 A0A1W2PQY0 241 aa23.91■■□□□ 1.42
CASC4-204ENST00000557945 SPTLC2O15270 562 aa23.91■■□□□ 1.42
CASC4-204ENST00000557945 CABYRO75952 493 aa23.91■■□□□ 1.42
CASC4-204ENST00000557945 STAT5BP51692 787 aa23.91■■□□□ 1.42
CASC4-204ENST00000557945 EPHA7Q15375 998 aa23.91■■□□□ 1.42
CASC4-204ENST00000557945 CCDC60Q8IWA6 550 aaPredicted RBP23.91■■□□□ 1.42
CASC4-204ENST00000557945 PCYT2Q99447 389 aa23.91■■□□□ 1.42
CASC4-204ENST00000557945 SENP6Q9GZR1 1112 aaPredicted RBP23.91■■□□□ 1.42
CASC4-204ENST00000557945 LRWD1Q9UFC0 647 aa23.91■■□□□ 1.42
CASC4-204ENST00000557945 ZNF215Q9UL58 517 aaPredicted RBP23.91■■□□□ 1.42
CASC4-204ENST00000557945 IGKV6D-21A0A0A0MT36 114 aa23.9■■□□□ 1.42
CASC4-204ENST00000557945 H3BRB1 525 aa23.9■■□□□ 1.42
CASC4-204ENST00000557945 LGR5O75473 907 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms