RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 GPR19Q15760 415 aa7.46□□□□□ -1.22
GPHN-215ENST00000557654 PRR31Q5SQ13 230 aa7.46□□□□□ -1.22
GPHN-215ENST00000557654 ABHD17CQ6PCB6 329 aa7.46□□□□□ -1.22
GPHN-215ENST00000557654 TTLL7Q6ZT98 887 aa7.46□□□□□ -1.22
GPHN-215ENST00000557654 C16orf59Q7L2K0 433 aa7.46□□□□□ -1.22
GPHN-215ENST00000557654 SP8Q8IXZ3 490 aa7.46□□□□□ -1.22
GPHN-215ENST00000557654 MAGEB10Q96LZ2 347 aaPredicted RBP7.46□□□□□ -1.22
GPHN-215ENST00000557654 ADAM7Q9H2U9 754 aa7.46□□□□□ -1.22
GPHN-215ENST00000557654 NGRNQ9NPE2 291 aaKnown RBP7.46□□□□□ -1.22
GPHN-215ENST00000557654 CROTQ9UKG9 612 aa7.46□□□□□ -1.22
GPHN-215ENST00000557654 SRPK3Q9UPE1 567 aa7.46□□□□□ -1.22
GPHN-215ENST00000557654 KRTAP4-8A0A0G2JLE6 195 aa7.45□□□□□ -1.22
GPHN-215ENST00000557654 TCRBV16S1A1N1A0A5B0 115 aa7.45□□□□□ -1.22
GPHN-215ENST00000557654 FAM90A27PA6NNH2 459 aa7.45□□□□□ -1.22
GPHN-215ENST00000557654 DDX3XO00571 662 aaKnown RBP eCLIP7.45□□□□□ -1.22
GPHN-215ENST00000557654 RPL13P26373 211 aaKnown RBP7.45□□□□□ -1.22
GPHN-215ENST00000557654 EPHA5P54756 1037 aa7.45□□□□□ -1.22
GPHN-215ENST00000557654 NT5DC1Q5TFE4 455 aa7.45□□□□□ -1.22
GPHN-215ENST00000557654 FSTL4Q6MZW2 842 aa7.45□□□□□ -1.22
GPHN-215ENST00000557654 TTLL6Q8N841 843 aa7.45□□□□□ -1.22
GPHN-215ENST00000557654 RNPC3Q96LT9 517 aaKnown RBP7.45□□□□□ -1.22
GPHN-215ENST00000557654 SMURF1Q9HCE7 757 aa7.45□□□□□ -1.22
GPHN-215ENST00000557654 PCDH18Q9HCL0 1135 aa7.45□□□□□ -1.22
GPHN-215ENST00000557654 CCDC163A0A0D9SF12 145 aa7.44□□□□□ -1.22
GPHN-215ENST00000557654 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.44□□□□□ -1.22
GPHN-215ENST00000557654 ZNF561-AS1K7EIQ3 104 aa7.44□□□□□ -1.22
GPHN-215ENST00000557654 KCNA6P17658 529 aa7.44□□□□□ -1.22
GPHN-215ENST00000557654 NAT1P18440 290 aa7.44□□□□□ -1.22
GPHN-215ENST00000557654 MLLT6P55198 1093 aaPredicted RBP7.44□□□□□ -1.22
GPHN-215ENST00000557654 CRY1Q16526 586 aa7.44□□□□□ -1.22
GPHN-215ENST00000557654 FAM47CQ5HY64 1035 aa7.44□□□□□ -1.22
GPHN-215ENST00000557654 CD276Q5ZPR3 534 aa7.44□□□□□ -1.22
GPHN-215ENST00000557654 ZNF761Q86XN6 746 aaPredicted RBP7.44□□□□□ -1.22
GPHN-215ENST00000557654 ADAMTS17Q8TE56 1095 aa7.44□□□□□ -1.22
GPHN-215ENST00000557654 RIC8BQ9NVN3 520 aa7.44□□□□□ -1.22
GPHN-215ENST00000557654 USP35Q9P2H5 1018 aa7.44□□□□□ -1.22
GPHN-215ENST00000557654 PLD2O14939 933 aa7.43□□□□□ -1.22
GPHN-215ENST00000557654 ASMTLO95671 621 aa7.43□□□□□ -1.22
GPHN-215ENST00000557654 BTBD8Q5XKL5 378 aa7.43□□□□□ -1.22
GPHN-215ENST00000557654 MCTP2Q6DN12 878 aa7.43□□□□□ -1.22
GPHN-215ENST00000557654 VASNQ6EMK4 673 aa7.43□□□□□ -1.22
GPHN-215ENST00000557654 CLIC6Q96NY7 704 aa7.43□□□□□ -1.22
GPHN-215ENST00000557654 TMEM260Q9NX78 707 aa7.43□□□□□ -1.22
GPHN-215ENST00000557654 NUB1Q9Y5A7 615 aa7.43□□□□□ -1.22
GPHN-215ENST00000557654 KCNQ2O43526 872 aa7.42□□□□□ -1.22
GPHN-215ENST00000557654 PTPN1P18031 435 aaKnown RBP7.42□□□□□ -1.22
GPHN-215ENST00000557654 GLRBP48167 497 aa7.42□□□□□ -1.22
GPHN-215ENST00000557654 SEC23AQ15436 765 aa7.42□□□□□ -1.22
GPHN-215ENST00000557654 C21orf62-AS1Q17RA5 79 aa7.42□□□□□ -1.22
GPHN-215ENST00000557654 TM4SF20Q53R12 229 aa7.42□□□□□ -1.22
GPHN-215ENST00000557654 PRAMEF18Q5VWM3 479 aa7.42□□□□□ -1.22
GPHN-215ENST00000557654 CPZQ66K79 652 aa7.42□□□□□ -1.22
GPHN-215ENST00000557654 IGSF22Q8N9C0 903 aa7.42□□□□□ -1.22
GPHN-215ENST00000557654 DTX3Q8N9I9 347 aa7.42□□□□□ -1.22
GPHN-215ENST00000557654 ZCCHC14Q8WYQ9 949 aaKnown RBP7.42□□□□□ -1.22
GPHN-215ENST00000557654 TMEM209Q96SK2 561 aa7.42□□□□□ -1.22
GPHN-215ENST00000557654 PDGFDQ9GZP0 370 aaPredicted RBP7.42□□□□□ -1.22
GPHN-215ENST00000557654 SLC39A2Q9NP94 309 aa7.42□□□□□ -1.22
GPHN-215ENST00000557654 HSPBP1Q9NZL4 362 aa7.42□□□□□ -1.22
GPHN-215ENST00000557654 NOBOXO60393 691 aa7.41□□□□□ -1.22
GPHN-215ENST00000557654 ZNF28P17035 718 aa7.41□□□□□ -1.22
GPHN-215ENST00000557654 PFKPQ01813 784 aa7.41□□□□□ -1.22
GPHN-215ENST00000557654 ZNF460Q14592 562 aa7.41□□□□□ -1.22
GPHN-215ENST00000557654 SKIDA1Q1XH10 827 aa7.41□□□□□ -1.22
GPHN-215ENST00000557654 FIGNQ5HY92 759 aa7.41□□□□□ -1.22
GPHN-215ENST00000557654 OVCH1Q7RTY7 1134 aa7.41□□□□□ -1.22
GPHN-215ENST00000557654 JAZF1Q86VZ6 243 aa7.41□□□□□ -1.22
GPHN-215ENST00000557654 DDX1Q92499 740 aaKnown RBP7.41□□□□□ -1.22
GPHN-215ENST00000557654 CELF4Q9BZC1 486 aaKnown RBP7.41□□□□□ -1.22
GPHN-215ENST00000557654 MRPL42Q9Y6G3 142 aaKnown RBP7.41□□□□□ -1.22
GPHN-215ENST00000557654 ATP23Q9Y6H3 246 aa7.41□□□□□ -1.22
GPHN-215ENST00000557654 KRTAP9-7A8MTY7 169 aa7.4□□□□□ -1.22
GPHN-215ENST00000557654 GSTA4O15217 222 aa7.4□□□□□ -1.22
GPHN-215ENST00000557654 DNAJC8O75937 253 aaPredicted RBP7.4□□□□□ -1.22
GPHN-215ENST00000557654 SDSP20132 328 aa7.4□□□□□ -1.22
GPHN-215ENST00000557654 IL13P35225 146 aa7.4□□□□□ -1.22
GPHN-215ENST00000557654 CTSWP56202 376 aa7.4□□□□□ -1.22
GPHN-215ENST00000557654 LACTBP83111 547 aaPredicted RBP7.4□□□□□ -1.22
GPHN-215ENST00000557654 RGL3Q3MIN7 710 aa7.4□□□□□ -1.22
GPHN-215ENST00000557654 LILRA6Q6PI73 481 aa7.4□□□□□ -1.22
GPHN-215ENST00000557654 EP400NLQ6ZTU2 488 aa7.4□□□□□ -1.22
GPHN-215ENST00000557654 NLGN4XQ8N0W4 816 aa7.4□□□□□ -1.22
GPHN-215ENST00000557654 TXNDC5Q8NBS9 432 aaKnown RBP7.4□□□□□ -1.22
GPHN-215ENST00000557654 DLL4Q9NR61 685 aa7.4□□□□□ -1.22
GPHN-215ENST00000557654 USP40Q9NVE5 1235 aa7.4□□□□□ -1.22
GPHN-215ENST00000557654 DUSP10Q9Y6W6 482 aa7.4□□□□□ -1.22
GPHN-215ENST00000557654 PRAMEF25A6NGN4 478 aa7.39□□□□□ -1.23
GPHN-215ENST00000557654 ZNF839A8K0R7 811 aa7.39□□□□□ -1.23
GPHN-215ENST00000557654 SCDO00767 359 aa7.39□□□□□ -1.23
GPHN-215ENST00000557654 PRICKLE3O43900 615 aaPredicted RBP7.39□□□□□ -1.23
GPHN-215ENST00000557654 COL6A1P12109 1028 aa7.39□□□□□ -1.23
GPHN-215ENST00000557654 GJA9P57773 515 aa7.39□□□□□ -1.23
GPHN-215ENST00000557654 TKFCQ3LXA3 575 aa7.39□□□□□ -1.23
GPHN-215ENST00000557654 FNDC3BQ53EP0 1204 aaKnown RBP7.39□□□□□ -1.23
GPHN-215ENST00000557654 TMEM177Q53S58 311 aa7.39□□□□□ -1.23
GPHN-215ENST00000557654 TRMT10BQ6PF06 316 aaKnown RBP7.39□□□□□ -1.23
GPHN-215ENST00000557654 FERMT3Q86UX7 667 aa7.39□□□□□ -1.23
GPHN-215ENST00000557654 NOSTRINQ8IVI9 506 aa7.39□□□□□ -1.23
GPHN-215ENST00000557654 FANCLQ9NW38 375 aa7.39□□□□□ -1.23
GPHN-215ENST00000557654 ZFP69BQ9UJL9 534 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 249.4 ms