RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 NBNO60934 754 aa8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 TBX10O75333 385 aa8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 EYA4O95677 639 aa8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 CYP2D6P10635 497 aa8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 VARSP26640 1264 aaKnown RBP8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 CDK8P49336 464 aa8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 HYAL1Q12794 435 aa8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 BECN1Q14457 450 aa8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 PUM1Q14671 1186 aaKnown RBP eCLIP8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 TMEM63BQ5T3F8 832 aa8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 FBXO11Q86XK2 927 aa8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 AMOTL1Q8IY63 956 aa8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 MYOCDQ8IZQ8 938 aa8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 OR6J1Q8NGC5 347 aa8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 PPP1R13LQ8WUF5 828 aa8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 SDR42E1Q8WUS8 393 aa8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 LMAN2LQ9H0V9 348 aa8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 WASF2Q9Y6W5 498 aa8.06□□□□□ -1.12
SPTLC2-206ENST00000557566 PALM3A6NDB9 673 aaPredicted RBP8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 F5H6K3 240 aa8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 GNAI3P08754 354 aa8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 CKBP12277 381 aa8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 ICAM3P32942 547 aa8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 NDUFV1P49821 464 aa8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 CHMP4BP1P59074 171 aa8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 KLRC3Q07444 240 aa8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 RBL2Q08999 1139 aa8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 TCTN1Q2MV58 587 aa8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 RIPOR3Q96MK2 946 aa8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 YME1L1Q96TA2 773 aa8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 C1QTNF2Q9BXJ5 285 aa8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 WDR11Q9BZH6 1224 aa8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 IGFLR1Q9H665 355 aa8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 RNF146Q9NTX7 359 aa8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 FEM1BQ9UK73 627 aa8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 BRPF3Q9ULD4 1205 aa8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 DDX49Q9Y6V7 483 aaKnown RBP8.05□□□□□ -1.12
SPTLC2-206ENST00000557566 ANKRD11Q6UB99 2663 aaPredicted RBP8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 NKRFO15226 690 aaKnown RBP eCLIP8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 LGR5O75473 907 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 NDUFB10O96000 172 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 CTNNB1P35222 781 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 PRR20EP86478 221 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 PRR20CP86479 221 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 PRR20DP86480 221 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 PRR20BP86481 221 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 PRR20AP86496 221 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 SLFN5Q08AF3 891 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 OS9Q13438 667 aaPredicted RBP8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 ADAM15Q13444 863 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 PTPN21Q16825 1174 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 TKFCQ3LXA3 575 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 ALDH1L2Q3SY69 923 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 C4orf48Q5BLP8 95 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 LCE2AQ5TA79 106 aaPredicted RBP8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 C16orf86Q6ZW13 317 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 SESTD1Q86VW0 696 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 SMRP1Q8NCR6 262 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 SNIP1Q8TAD8 396 aaKnown RBP8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 PPP2R3CQ969Q6 453 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 MSLNLQ96KJ4 702 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 C11orf84Q9BUA3 381 aaPredicted RBP8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 PHF7Q9BWX1 381 aaPredicted RBP8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 SMC4Q9NTJ3 1288 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 SPTBN2O15020 2390 aa8.04□□□□□ -1.12
SPTLC2-206ENST00000557566 EMSYQ7Z589 1322 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 USP24Q9UPU5 2620 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 LINC01565O15544 149 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 ATP9BO43861 1147 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 PDGFBP01127 241 aaPredicted RBP8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 RB1P06400 928 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 COASYQ13057 564 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 PPP2R5BQ15173 497 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 C12orf60Q5U649 245 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 GDF6Q6KF10 455 aaPredicted RBP8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 PHTF2Q8N3S3 785 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 MORC4Q8TE76 937 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 DHX38Q92620 1227 aaKnown RBP8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 RPGRIP1Q96KN7 1286 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 TRERF1Q96PN7 1200 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 CTAGE1Q96RT6 745 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 API5Q9BZZ5 524 aaKnown RBP8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 ANTXR1Q9H6X2 564 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 INCENPQ9NQS7 918 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 ATP8A2Q9NTI2 1148 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 NYAP2Q9P242 653 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 TFIP11Q9UBB9 837 aaKnown RBP8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 ADD3Q9UEY8 706 aaKnown RBP8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 DBNLQ9UJU6 430 aaKnown RBP8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 ISY1Q9ULR0 285 aaKnown RBP8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 RWDD3Q9Y3V2 267 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 PCDHB9Q9Y5E1 797 aa8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 MAFBQ9Y5Q3 323 aaPredicted RBP8.03□□□□□ -1.12
SPTLC2-206ENST00000557566 FAM208BQ5VWN6 2430 aa8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 LOC102724159A0A0B4J2E5 919 aa8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 RBM47A0AV96 593 aaKnown RBP8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 E9PSI1 815 aa8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 C5orf67F2Z3F1 127 aa8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 J3QL48 77 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms